#360: how to aggregate BMI, medications and the like for breast cancer analysis? --------------------------+-------------------------------- Reporter: dconnolly | Owner: tmeyer Type: design-issue | Status: assigned Priority: major | Milestone: cohort-char-bc-db Component: methods-core | Resolution: Keywords: | Blocked By: Blocking: 328, 382 | --------------------------+-------------------------------- Changes (by dconnolly):
* cc: gpc-dev@… (added) * owner: brad_mcdowell => tmeyer * status: reopened => assigned Comment: The relevant RxCUIs are the direct children of the VA classes that descend from either of these: - [AN000] ANTINEOPLASTICS - [HS000] HORMONES/SYNTHETICS/MODIFIERS They're maintained in the form of REDCap pulldown choices in [https://github.com/kumc- bmi/bc_qa/blob/rc_codebook/bc2_collect/rx_choices.txt rx_choices.txt]. I built this file when I discovered KUMC's drug ontology isn't complete; it now has UNMC's drugs as well. You're welcome to propose edits in the normal git/github ways or just email me suggested edits. Then I can paste them into REDCap. They're sorted by class code and then drug name. The first few lines are: {{{ 377179, [AN100] RXCUI:377179 Busulfan Injectable Solution 371165, [AN100] RXCUI:371165 Busulfan Oral Tablet 378774, [AN100] RXCUI:378774 Carmustine Drug Implant }}} The label pattern is `[{vc}] RXCUI:{cui} {drug}`. from [https://github.com/kumc- bmi/bc_qa/blob/rc_codebook/bc2_collect/bc2_dd.py#L282 bc2_dd.py#L282] -- Ticket URL: <http://informatics.gpcnetwork.org/trac/Project/ticket/360#comment:10> gpc-informatics <http://informatics.gpcnetwork.org/> Greater Plains Network - Informatics _______________________________________________ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu http://listserv.kumc.edu/mailman/listinfo/gpc-dev