Yes. Or you could have tried it to see! :-) Mark On Feb 22, 2014 8:04 AM, "Yogendra Ramtirtha" <ramtirtha.yogen...@gmail.com> wrote:
> Actually, I used the build directory which was created earlier. > Should I create a new build directory all over again ? > Can you please guide me. > Thanks > > > On Sat, Feb 22, 2014 at 12:12 AM, Justin Lemkul <jalem...@vt.edu> wrote: > > > > > > > On 2/21/14, 1:29 PM, Yogendra Ramtirtha wrote: > > > >> Hello, > >> Sorry to disturb you but can you please elaborate, since I tried the > >> modified command but still it gives similar error as before. > >> > >> > >> > > Did you start from a clean build directory? > > > > -Justin > > > > > > On Fri, Feb 21, 2014 at 10:49 PM, Yogendra Ramtirtha < > >> ramtirtha.yogen...@gmail.com> wrote: > >> > >> Thanks a lot I will try and let you know. > >>> > >>> > >>> On Fri, Feb 21, 2014 at 4:46 PM, Pavan Kumar <kumar.pavan...@gmail.com > > > >>> wrote: > >>> > >>> Hello Yogendra, > >>>> > >>>> Remove "-DGMX_BUILD_OWN_FFTW=ON" argument and add > >>>> "CMAKE_PREFIX_PATH=/path/to/fftw" > >>>> > >>>> I hope it works > >>>> > >>>> > >>>> On Fri, Feb 21, 2014 at 4:31 PM, Yogendra Ramtirtha < > >>>> ramtirtha.yogen...@gmail.com> wrote: > >>>> > >>>> Hello, > >>>>> Actually, I am trying to install Gromacs-5.0-beta2 on my systemwhich > >>>>> has > >>>>> Ubuntu 12.04. > >>>>> Everything went fine untill the make command which gives me the > >>>>> > >>>> following > >>>> > >>>>> error - > >>>>> > >>>>> ( [ 0%] Performing download step (verify and extract) for > 'fftwBuild' > >>>>> -- verifying file... > >>>>> file='http:/www.fftw.org/fftw-3.3.3.tar.gz' > >>>>> -- verifying file... warning: did not verify file - no URL_HASH > >>>>> > >>>> specified? > >>>> > >>>>> -- extracting... > >>>>> > >>>>> > >>>>> > >>>>> src='/home/yogendra/Desktop/gromacs-5.0-beta2/build/src/ > >>>> contrib/fftw/fftwBuild-prefix/src/http:/ > >>>> > >>>>> www.fftw.org/fftw-3.3.3.tar.gz' > >>>>> > >>>>> > >>>>> > >>>>> dst='/home/yogendra/Desktop/gromacs-5.0-beta2/build/src/ > >>>> contrib/fftw/fftwBuild-prefix/src/fftwBuild' > >>>> > >>>>> CMake Error at fftwBuild-stamp/extract-fftwBuild.cmake:11 (message): > >>>>> error: file to extract does not exist: > >>>>> > >>>>> > >>>>> > >>>>> '/home/yogendra/Desktop/gromacs-5.0-beta2/build/src/ > >>>> contrib/fftw/fftwBuild-prefix/src/http:/ > >>>> > >>>>> www.fftw.org/fftw-3.3.3.tar.gz' > >>>>> > >>>>> > >>>>> make[2]: *** > >>>>> > >>>>> [src/contrib/fftw/fftwBuild-prefix/src/fftwBuild-stamp/ > >>>> fftwBuild-download] > >>>> > >>>>> Error 1 > >>>>> make[1]: *** [src/contrib/fftw/CMakeFiles/fftwBuild.dir/all] Error 2 > >>>>> make: *** [all] Error 2 ) > >>>>> > >>>>> To deal with this error, I manually installed fftw-3.3.3 on my > desktop > >>>>> > >>>> but > >>>> > >>>>> the major hurdle now is that I don't know how to proceed with Gromacs > >>>>> installation. > >>>>> Please can anyone guide me, I need help as Gromacs is a part of my > >>>>> > >>>> academic > >>>> > >>>>> work. ( I am a graduate student of biotechnology. ) > >>>>> -- > >>>>> Gromacs Users mailing list > >>>>> > >>>>> * Please search the archive at > >>>>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > >>>>> posting! > >>>>> > >>>>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > >>>>> > >>>>> * For (un)subscribe requests visit > >>>>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-usersor > >>>>> send a mail to gmx-users-requ...@gromacs.org. > >>>>> > >>>>> > >>>> > >>>> > >>>> -- > >>>> Thanks & Regards, > >>>> Pavan Kumar > >>>> Project Engineer > >>>> CDAC -KP > >>>> Ph +91-7676367646 > >>>> -- > >>>> Gromacs Users mailing list > >>>> > >>>> * Please search the archive at > >>>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > >>>> posting! > >>>> > >>>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > >>>> > >>>> * For (un)subscribe requests visit > >>>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > >>>> send a mail to gmx-users-requ...@gromacs.org. > >>>> > >>>> > >>> > >>> > > -- > > ================================================== > > > > Justin A. Lemkul, Ph.D. > > Ruth L. Kirschstein NRSA Postdoctoral Fellow > > > > Department of Pharmaceutical Sciences > > School of Pharmacy > > Health Sciences Facility II, Room 601 > > University of Maryland, Baltimore > > 20 Penn St. > > Baltimore, MD 21201 > > > > jalem...@outerbanks.umaryland.edu | (410) 706-7441 > > http://mackerell.umaryland.edu/~jalemkul > > > > ================================================== > > > > -- > > Gromacs Users mailing list > > > > * Please search the archive at http://www.gromacs.org/ > > Support/Mailing_Lists/GMX-Users_List before posting! > > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > * For (un)subscribe requests visit > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > > send a mail to gmx-users-requ...@gromacs.org. > > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.