Hello, I want to do a reverse transformation of my system containing: bi-layer, protein and water.
The Martini website ( http://md.chem.rug.nl/cgmartini/index.php/reverse-transformation) says to install gromacs version 3.3.1 I am currently using 4.6.1 gromacs version. ques A: Is this version incapable of the transformation? Also, the martini website says to: *"1. Unpack the rev_trans.tar.gz in the MARTINITUTORIAL directory that contains all necessary gromacs files for this exercise.* *2. Compile and/or source the modifi ed version of gromacs (remember this tool is based upon gromacs version 3.3.1 and needs the corresponding tricks and threats to be compiled.)* *source /where-ever-you-installed-it/gromacs-3.3.1/bin/GMXRC"* ques B:On performing untar on rev_trans.tar.gz there is no MARTINITUTORIAL directory ques C: On performing untar on gmx_rev.tar.gz there is no bin folder KIndly help. Thanks, sxn -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
