Dear all,

I want to simulate the quantum dot PbSe (QD) by gromacs and amber 99sb FF.
but, as you know, gromacs doesn't know this QD and its MD parameters is not
exist. how can I find the Lennard jones parameters and partial charges for
this QD?

best regards,

Sako Mirzaie
PhD in biochemistry, Assistant Professor, science faculty, Islamic Azad
university of
Sanandaj, Sanandaj, Iran
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