blockquote, div.yahoo_quoted { margin-left: 0 !important; border-left:1px #715FFA solid !important; padding-left:1ex !important; background-color:white !important; } Hi andrea Thank you for replyYes i moved the speed control on the left but it wasnt affected. And now i went to graphical reprezentation and increased trajectory smoothing windows size but it was not ok too. It seems my protein has many aberrant bonds
Sent from Yahoo Mail for iPhone On Monday, August 7, 2017, 2:24 PM, Andrea Spitaleri <andrea.spital...@iit.it> wrote: Hi please refer to VMD guide/manual/mailing list. You have different options to "decrease" the motion: 1. in VMD Main there is a speed control, just move to left with mouse or/and 2. in Graphical Representations under Trajectory tab you can increase the number of "Trajectory Smoothing Window Size". HTH and On 07/08/2017 11:38, farial tavakoli wrote: > blockquote, div.yahoo_quoted { margin-left: 0 !important; border-left:1px >#715FFA solid !important; padding-left:1ex !important; background-color:white >!important; } Dear gromacs user > I am trying to view .gro and .xtc files of my complex by VMD but when i load > first .gro and then .xtc files in vmd , it has so high motion , such that no > molecules are viewable. Would you please help me how can i view it? > ThanksFarial > > > Sent from Yahoo Mail for iPhone > -- Andrea Spitaleri PhD Computational mOdelling of NanosCalE and bioPhysical sysTems - CONCEPT Lab ISTITUTO ITALIANO DI TECNOLOGIA Via Morego 30, 16163 - Genova, Italy https://iit.it/research/lines/computational-modelling-of-nanoscale-and-biophysical-systems cell: +39 3485188790 https://iit.it/andrea-spitaleri ORCID: http://orcid.org/0000-0003-3012-3557 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.