Messages by Thread
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[gmx-users] Parameter preparation of non-standard amino acid
Mijiddorj B
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[gmx-users] How to handle calcium ions with charmm36 force field
sunyeping
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[gmx-users] gmx traj ekrot : too many iterations in routine JACOBI
Marlon Sidore
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[gmx-users] Pull Code
Johannes Hermann
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[gmx-users] various issues when simulating cholesterol membrane
Ayesha Fatima
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[gmx-users] Gromacs2019 + Gaussian09 QMMM
nikolaev
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[gmx-users] Protein ligand simulation
DEEPANSHU SINGLA
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[gmx-users] Regarding RDF
Ashma Khan
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[gmx-users] Running iteration for lipid shrinking using InflateGRO methodology
Yogesh Sharma
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[gmx-users] Alchemical Transformation PosRes State B
Johannes Hermann
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[gmx-users] Fwd: ion flux counter
Harutyun Sahakyan
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[gmx-users] Recreating newer TPRs for old Gromacs (Jernej Zidar)
ABEL Stephane
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[gmx-users] Recreating newer TPRs for old Gromacs
Jernej Zidar
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[gmx-users] First beta release of GROMACS 2020
Paul bauer
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[gmx-users] Ligand molecule occupancy
Pandya, Akash
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[gmx-users] issues running virus capsid simulation
Asis Jana
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Re: [gmx-users] Cannot Generate .gro and .cpt files after running nvt
Chenyu Liu
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[gmx-users] Cannot Generate .gro and .cpt files after running nvt
Chenyu Liu
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[gmx-users] [gmx-user] CGenFF 4.0 vs 4.1, complex MD simulation.
Quin K
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[gmx-users] Umbrella sampling on lipid bilayer
Mahsa Rezaei
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[gmx-users] GROMACS Domain decomposition
NguyenDuyVy
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[gmx-users] Getting non-bonded forces from GROMACS
James
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[gmx-users] Problem with adding New peptide Terminus
Neena Susan Eappen
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[gmx-users] Neena Susan Eappen shared "C_Terminus" with you.
Neena Susan Eappen
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[gmx-users] potential
ÁLVARO RODRIGO RUIZ FERNÁNDEZ
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[gmx-users] Atom type 'AS' not currently supported by GROMOS.
Yogesh Sharma
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[gmx-users] OPLS AA/M pdb2gmx error with inter
Daniel Kozuch
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[gmx-users] units
antonia vyrkou
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[gmx-users] Panelty score for CGenFF
Quin K
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[gmx-users] index.ndx file of all cluster
Alex
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[gmx-users] ndx file
Omkar Singh
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[gmx-users] gromos force field
p buscemi
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[gmx-users] Fatal error in atom
Nandu TG
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[gmx-users] Free webinar on accelerating sampling in GROMACS with the AWH method
Paul bauer
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[gmx-users] Position Restraints MD
ISHRAT JAHAN
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[gmx-users] question on system blow-up
Lei Qian
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[gmx-users] Functional dynamics in gromacs
Gustavo Olivos
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[gmx-users] Simulated Annealing Procedure
Neena Susan Eappen
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[gmx-users] CHARMM GUI membrane builder's assembled output
Yogesh Sharma
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[gmx-users] simulation continuation without -t option
Prabir Khatua
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[gmx-users] Center of mass of ligand
Naveen BK
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[gmx-users] Energy minimization problem for POPE/POPG soluted bilayer taken from M. Karttunen website
daniel depope
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[gmx-users] Tesla GPUs: P40 or P100?
Matteo Tiberti
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[gmx-users] Tetrahedral Order Parameter
m g
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[gmx-users] -t option?
Hadi Rahmaninejad
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[gmx-users] gmx trjorder help
Pandya, Akash
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[gmx-users] SIMD options - detection program issue
Stefano Guglielmo
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[gmx-users] Slab shifts out of the simulation box
Mohammed Hamza
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[gmx-users] Small ligand activators molecule
Shivangi Agarwal
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[gmx-users] Direction-periodic confusion
John Whittaker
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[gmx-users] Subject: RAM usage of gmx msd5
ABEL Stephane
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Re: [gmx-users] gromacs.org_gmx-users Digest, Vol 185, Issue 55
ABEL Stephane
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[gmx-users] Equilibration Problem.
Navneet Kumar Singh
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[gmx-users] RAM usage of gmx msd
Martin Kern
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[gmx-users] Ionization: Your solvent group size (76663) is not a multiple of 3
Mohammed I Sorour
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[gmx-users] Issues with energy minimization of a membrane protein
Prasanth G, Research Scholar
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Re: [gmx-users] gromacs.org_gmx-users Digest, Vol 185, Issue 50
Nirali Desai
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[gmx-users] RMSD analysis and stability
Quin K
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[gmx-users] What is the equivalent command for insert-molecules in Gromacs 3.3.1?
ZHANG Cheng
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[gmx-users] PMF wrong when calculating dihedral angle rotate
yujie Liu
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[gmx-users] Batch mode error in GROMACS version 2019.2
Rajib Biswas
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[gmx-users] Regarding obtaining potential energy using energy groups
Nirali Desai
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[gmx-users] error got while xpm2ps
Kanwal Gill
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[gmx-users] Regarding reliability of MD simulation
ISHRAT JAHAN
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[gmx-users] Amber 14SB force-field problem with residue HID
Kevin
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[gmx-users] Entropic effects in PMF at zero distance
dgfd dgdfg
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[gmx-users] How can Build gromacs using MSVC on Win64 with AVX2?
Tatsuro MATSUOKA
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[gmx-users] Fwd: query
Nirali Desai
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[gmx-users] SMD options
Stefano Guglielmo
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[gmx-users] Ramachandran Plot for a Polymer
Shan Jayasinghe
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[gmx-users] compressibility
m g
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[gmx-users] Delete Groups from gro file
Gselman, Larissa
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[gmx-users] Steered MD:Setup box in the pulling vector direction and position restraint for protein?
Bakary N'tji Diallo
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[gmx-users] Using -multidir option on Cray (aprun)
Suman Chakrabarty
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[gmx-users] How to use gmx h2order when using four point water model
Jun Zhou
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[gmx-users] gmx pairdist help
Pandya, Akash
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[gmx-users] grompp not possible with annealing - Gromacs 2019.1
Tafelmeier, Stefanie
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[gmx-users] MSVC or later now supports AVX2 and AVX_512
Tatsuro MATSUOKA