rekado pushed a commit to branch master
in repository guix.
commit 5ce21e7153badd490eb98587bf5db2e77c36b8eb
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Sat Jun 5 08:49:48 2021 +0200
gnu: r-rtracklayer: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.0.
[propagated-inputs]: Add r-biocio and r-restfulr.
---
gnu/packages/bioconductor.scm | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 12c5dfe..16c2a79 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3986,13 +3986,13 @@ tab-delimited (tabix) files.")
(define-public r-rtracklayer
(package
(name "r-rtracklayer")
- (version "1.50.0")
+ (version "1.52.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "rtracklayer" version))
(sha256
(base32
- "12zimhpdzjyzd81wrzz5hdbzvlgzcs22x1nnaf2jq4cba3ch5px8"))))
+ "0iic0g0clsjd9ypdmfs6k52hrnmfszhxzg0xx89nszpasf69wghv"))))
(build-system r-build-system)
(arguments
`(#:phases
@@ -4002,20 +4002,21 @@ tab-delimited (tabix) files.")
(substitute* "DESCRIPTION"
((" zlibbioc,") ""))
(substitute* "NAMESPACE"
- (("import\\(zlibbioc\\)") ""))
- #t)))))
+ (("import\\(zlibbioc\\)") "")))))))
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs
`(("zlib" ,zlib)))
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
+ ("r-biocio" ,r-biocio)
("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rcurl" ,r-rcurl)
+ ("r-restfulr" ,r-restfulr)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
("r-xml" ,r-xml)
