rekado pushed a commit to branch master
in repository guix.
commit ba9573b14e67c2fdd9ac4c56daeaa5f3d03b7486
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Thu Nov 4 22:04:28 2021 +0000
gnu: r-rbowtie2: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.0.0.
[inputs]: Add samtools.
[propagated-inputs]: Add r-magrittr and r-rsamtools.
---
gnu/packages/bioconductor.scm | 10 +++++++---
1 file changed, 7 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c1b7f0d..766e4fa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9007,18 +9007,22 @@ This algorithm is based on the publication by Hart et
al., 2013 (Pubmed ID
(define-public r-rbowtie2
(package
(name "r-rbowtie2")
- (version "1.14.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Rbowtie2" version))
(sha256
(base32
- "0r5yqjal48xlcv5cidi7p3zwygvsllmv2zzkwkc9kfq083l2i4ih"))))
+ "0xpvrx2ak9x913sym4l46ycwbnmpcdwb3bf3dfd2gsp0krv8vh1x"))))
(properties `((upstream-name . "Rbowtie2")))
(build-system r-build-system)
+ (propagated-inputs
+ `(("r-magrittr" ,r-magrittr)
+ ("r-rsamtools" ,r-rsamtools)))
(inputs
- `(("zlib" ,zlib)))
+ `(("samtools" ,samtools)
+ ("zlib" ,zlib)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/Rbowtie2/";)
