rekado pushed a commit to branch master
in repository guix.
commit 01da92eef3bc43553674fdb83750fc19e4735cea
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Thu Nov 11 11:58:37 2021 +0000
gnu: Add rust-fastq-0.6.
* gnu/packages/crates-io.scm (rust-fastq-0.6): New variable.
---
gnu/packages/crates-io.scm | 37 +++++++++++++++++++++++++++++++++++++
1 file changed, 37 insertions(+)
diff --git a/gnu/packages/crates-io.scm b/gnu/packages/crates-io.scm
index 2459164..40fd4e3 100644
--- a/gnu/packages/crates-io.scm
+++ b/gnu/packages/crates-io.scm
@@ -17545,6 +17545,43 @@ is defined in the HTML specification.")
floats.")
(license (list license:expat license:asl2.0))))
+(define-public rust-fastq-0.6
+ (package
+ (name "rust-fastq")
+ (version "0.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "fastq" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "177jsfabnk3zl5zml6qvidzjpk53dp62rqjbdhbhr8cg7ms59p60"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:cargo-build-flags '("-vv")
+ #:phases
+ (modify-phases %standard-phases
+ ;; This is needed for the parasail-sys package.
+ (add-after 'unpack 'set-shell-for-configure-script
+ (lambda _
+ (setenv "SHELL" (which "sh"))
+ (setenv "CONFIG_SHELL" (which "sh")))))
+ #:cargo-inputs
+ (("rust-flate2" ,rust-flate2-1)
+ ("rust-lz4" ,rust-lz4-1)
+ ("rust-memchr" ,rust-memchr-2))
+ #:cargo-development-inputs
+ (("rust-bio" ,rust-bio-0.33)
+ ("rust-parasailors" ,rust-parasailors-0.3))))
+ (inputs
+ `(("zlib" ,zlib)))
+ (native-inputs
+ `(("libtool" ,libtool)))
+ (home-page "https://github.com/aseyboldt/fastq-rs";)
+ (synopsis "Parser for fastq files")
+ (description "This package provides a parser for fastq files.")
+ (license license:expat)))
+
(define-public rust-fastrand-1
(package
(name "rust-fastrand")
