rekado pushed a commit to branch core-updates-frozen
in repository guix.
commit 630671d2e8c5f24bd14b7ea581108f76a54b2865
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Sat Dec 4 00:21:27 2021 +0100
gnu: mafft: Replace references to %build-inputs and %outputs.
* gnu/packages/bioinformatics.scm (mafft)[arguments]: Replace references to
%outputs with a gexp; replace reference to %build-inputs in the
'wrap-programs
phase by binding INPUTS.
---
gnu/packages/bioinformatics.scm | 11 +++++------
1 file changed, 5 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9d8a33d..0c75169 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5221,10 +5221,9 @@ sequencing tag position and orientation.")
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no automated tests, though there are tests in the read me
- #:make-flags (let ((out (assoc-ref %outputs "out")))
- (list (string-append "PREFIX=" out)
- (string-append "BINDIR="
- (string-append out "/bin"))))
+ #:make-flags ,#~(list (string-append "PREFIX=" #$output)
+ (string-append "BINDIR="
+ (string-append #$output "/bin")))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'enter-dir
@@ -5264,11 +5263,11 @@ sequencing tag position and orientation.")
#t))
(delete 'configure)
(add-after 'install 'wrap-programs
- (lambda* (#:key outputs #:allow-other-keys)
+ (lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(path (string-append
- (assoc-ref %build-inputs "coreutils") "/bin:")))
+ (assoc-ref inputs "coreutils") "/bin:")))
(for-each (lambda (file)
(wrap-program file
`("PATH" ":" prefix (,path))))
