efraim pushed a commit to branch master
in repository guix.
commit 9d882d2ef51804e3ddc31b09f62257a5809cb0ba
Author: Efraim Flashner <[email protected]>
AuthorDate: Wed Feb 28 11:35:37 2024 +0200
gnu: bowtie1: Enable building on more systems.
* gnu/packages/bioinformatics.scm (bowtie1)[arguments]: Add make-flag to
disable searching for cpu features on non-x86 systems.
[supported-systems]: Enable all 64-bit supported systems.
Change-Id: Ice30df945ba154e39cd58a91847329e81038a3af
---
gnu/packages/bioinformatics.scm | 9 ++++++---
1 file changed, 6 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1613961c64..85565f44bd 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3775,14 +3775,17 @@ gapped, local, and paired-end alignment modes.")
`(#:tests? #f ; Tests need various perl modules
#:test-target "simple-test"
#:make-flags
- ,#~(list "CC=gcc" "all"
- (string-append "prefix=" #$output))
+ ,#~(append #$(if (not (target-x86?))
+ #~'("POPCNT_CAPABILITY=0")
+ #~'())
+ (list "CC=gcc" "all"
+ (string-append "prefix=" #$output)))
#:phases
(modify-phases %standard-phases
(delete 'configure))))
(inputs
(list python-wrapper tbb zlib))
- (supported-systems '("x86_64-linux"))
+ (supported-systems %64bit-supported-systems)
(home-page "https://bowtie-bio.sourceforge.net/index.shtml";)
(synopsis "Fast aligner for short nucleotide sequence reads")
(description
