This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new be235a3092 gnu: Add r-anndatar.
be235a3092 is described below
commit be235a3092c2b1df413bab02f345050f6b0f15fd
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Mon May 13 16:12:00 2024 +0200
gnu: Add r-anndatar.
* gnu/packages/bioinformatics.scm (r-anndatar): New variable.
Change-Id: I6060c5c15a46c064aa03ec2431a72ea88f925706
---
gnu/packages/bioinformatics.scm | 29 +++++++++++++++++++++++++++++
1 file changed, 29 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2dbf042365..fd12dd74df 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -723,6 +723,35 @@ alignment-free, it runs much faster and also easier to
use.")
and utilities for PacBio C++ applications.")
(license license:bsd-3)))
+(define-public r-anndatar
+ (let ((commit "5c3eb7e498d0d9bf1c522ad66f4eb8ad277238b6")
+ (revision "1"))
+ (package
+ (name "r-anndatar")
+ (version (git-version "0.99.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/scverse/anndataR";)
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0sx87i8cb4p08ihgpgflxs0fhkr1kw6lxvky4w766rq7wqy41cgk"))))
+ (properties `((upstream-name . "anndataR")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-matrix r-r6))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/scverse/anndataR";)
+ (synopsis "AnnData interoperability in R")
+ (description
+ "This package aims to bring the power and flexibility of @code{AnnData}
+to the R ecosystem, allowing you to effortlessly manipulate and analyze your
+single-cell data. This package lets you work with backed h5ad and zarr files,
+directly access various slots (e.g. X, obs, var), or convert the data into
+@code{SingleCellExperiment} and Seurat objects.")
+ (license license:expat))))
+
(define-public r-bedtorch
(let ((commit "f5ff4f83b94f59eac660333c64e4b2f296b35cea")
(revision "1"))
