rekado pushed a commit to branch python-team in repository guix. commit 32cd3f8363a6a92a6f322199896ebdb3e71a6921 Author: Ricardo Wurmus <rek...@elephly.net> AuthorDate: Tue Jan 14 15:23:41 2025 +0100
gnu: python-mofax: Update to 0.3.7-1.e4821fe. This looks like a downgrade, but it is in fact a more recent commit. * gnu/packages/bioinformatics.scm (python-mofax): Update to 0.3.7-1.e4821fe. [source]: Remove obsolete snippet. [arguments]: Remove test flags. [propagated-inputs]: Move python-poetry-core from here... [native-inputs]: ...to here. Change-Id: I6093d282887135f6b99d34a853cd9371cffe98f1 --- gnu/packages/bioinformatics.scm | 25 ++++++------------------- 1 file changed, 6 insertions(+), 19 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index cb36e4b597..bd981d6814 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4878,13 +4878,11 @@ multiple sequence alignments.") (license license:expat))) (define-public python-mofax - ;; This is a recent commit from the "dev" branch, which is much more recent - ;; than the latest commit from the "master" branch. - (let ((commit "4d96f8f0a5d5251847353656f523684d66c3c47a") - (revision "0")) + (let ((commit "e4821fef8b1f9f50afd84a6acb96fcc49445c967") + (revision "1")) (package (name "python-mofax") - (version (git-version "0.4.0" revision commit)) + (version (git-version "0.3.7" revision commit)) (source (origin (method git-fetch) (uri (git-reference @@ -4893,26 +4891,15 @@ multiple sequence alignments.") (file-name (git-file-name name version)) (sha256 (base32 - "1lwrw0qyvvnyiqz1l20dhcf7dxidb80cqgvk78czvdgba87yxzqx")) - (modules '((guix build utils))) - ;; Prevent the pyproject-build-system from guessing that flit - ;; should be used as a builder. - (snippet '(substitute* "pyproject.toml" - (("^#.*") ""))))) + "07lkz51n7p7inmmh4bpr6fcr6b6jcjvkfws06zn8kpxfsv5z9kxa")))) (build-system pyproject-build-system) - (arguments - (list - ;; This test is failing due to a bug. The bug has been reported to the - ;; developers. See https://github.com/bioFAM/mofax/issues/12 for more - ;; info. - #:test-flags '(list "-k" "not test_get_methods"))) (propagated-inputs (list python-h5py python-matplotlib python-pandas - python-poetry-core python-scipy python-seaborn)) - (native-inputs (list python-numpy python-pytest)) + (native-inputs (list python-poetry-core + python-numpy python-pytest)) (home-page "https://github.com/bioFAM/mofax") (synopsis "Motif activity finder for transcription factor motif analysis")