rekado pushed a commit to branch master
in repository guix.
commit b752a03e8bd64b4d8348b74a86595d379dbed632
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Thu Jan 9 13:50:08 2025 +0100
gnu: python-scikit-allel: Update to 1.3.13.
* gnu/packages/python-science.scm (python-scikit-allel): Update to 1.3.13.
[propagated-inputs]: Remove python-click.
[native-inputs]: Remove python-scipy.
Change-Id: I3c29bd3d9f87d0866da747c344740bad71cae1c3
---
gnu/packages/python-science.scm | 21 +++++++++------------
1 file changed, 9 insertions(+), 12 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 1fd1b0ba31..cbeaea2cac 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -423,13 +423,13 @@ routines such as routines for numerical integration and
optimization.")
(define-public python-scikit-allel
(package
(name "python-scikit-allel")
- (version "1.3.5")
+ (version "1.3.13")
(source
(origin
(method url-fetch)
- (uri (pypi-uri "scikit-allel" version))
+ (uri (pypi-uri "scikit_allel" version))
(sha256
- (base32 "1vg88ng6gd175gzk39iz1drxig5l91dyx398w2kbw3w8036zv8gj"))))
+ (base32 "0d9yadzhsjjqkh6rz273f53iwczk0c7pv9dajzcrmfnk036b8f4s"))))
(build-system pyproject-build-system)
(arguments
(list
@@ -451,21 +451,18 @@ routines such as routines for numerical integration and
optimization.")
(lambda _
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(propagated-inputs
- (list python-dask
- python-numpy
- python-click))
+ (list python-dask python-numpy))
(native-inputs
- (list python-cython
- python-setuptools
- python-wheel
- ;; The following are all needed for the tests
- htslib
+ (list htslib
+ python-cython
python-h5py
python-hmmlearn
python-numexpr
+ python-numpy
python-pytest
- python-scipy
+ python-setuptools
python-setuptools-scm
+ python-wheel
python-zarr))
(home-page "https://github.com/cggh/scikit-allel";)
(synopsis "Explore and analyze genetic variation data")
