rekado pushed a commit to branch master
in repository guix.
commit 4ad6679e79a02b07d3c4a5b91f97395043a7f0a7
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Tue Jan 14 15:23:41 2025 +0100
gnu: python-mofax: Update to 0.3.7-1.e4821fe.
This looks like a downgrade, but it is in fact a more recent commit.
* gnu/packages/bioinformatics.scm (python-mofax): Update to 0.3.7-1.e4821fe.
[source]: Remove obsolete snippet.
[arguments]: Remove test flags.
[propagated-inputs]: Move python-poetry-core from here...
[native-inputs]: ...to here.
Change-Id: I6093d282887135f6b99d34a853cd9371cffe98f1
---
gnu/packages/bioinformatics.scm | 25 ++++++-------------------
1 file changed, 6 insertions(+), 19 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1c372f5350..38739905b9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4905,13 +4905,11 @@ multiple sequence alignments.")
(license license:expat)))
(define-public python-mofax
- ;; This is a recent commit from the "dev" branch, which is much more recent
- ;; than the latest commit from the "master" branch.
- (let ((commit "4d96f8f0a5d5251847353656f523684d66c3c47a")
- (revision "0"))
+ (let ((commit "e4821fef8b1f9f50afd84a6acb96fcc49445c967")
+ (revision "1"))
(package
(name "python-mofax")
- (version (git-version "0.4.0" revision commit))
+ (version (git-version "0.3.7" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -4920,26 +4918,15 @@ multiple sequence alignments.")
(file-name (git-file-name name version))
(sha256
(base32
- "1lwrw0qyvvnyiqz1l20dhcf7dxidb80cqgvk78czvdgba87yxzqx"))
- (modules '((guix build utils)))
- ;; Prevent the pyproject-build-system from guessing that flit
- ;; should be used as a builder.
- (snippet '(substitute* "pyproject.toml"
- (("^#.*") "")))))
+ "07lkz51n7p7inmmh4bpr6fcr6b6jcjvkfws06zn8kpxfsv5z9kxa"))))
(build-system pyproject-build-system)
- (arguments
- (list
- ;; This test is failing due to a bug. The bug has been reported to the
- ;; developers. See https://github.com/bioFAM/mofax/issues/12 for more
- ;; info.
- #:test-flags '(list "-k" "not test_get_methods")))
(propagated-inputs (list python-h5py
python-matplotlib
python-pandas
- python-poetry-core
python-scipy
python-seaborn))
- (native-inputs (list python-numpy python-pytest))
+ (native-inputs (list python-poetry-core
+ python-numpy python-pytest))
(home-page "https://github.com/bioFAM/mofax";)
(synopsis
"Motif activity finder for transcription factor motif analysis")
