guix_mirror_bot pushed a commit to branch r-team
in repository guix.
commit 0b56a9c7fcf0296aae8c3a80f60b9616a28a8595
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Tue Nov 25 13:50:38 2025 +0100
gnu: r-chromvar: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.32.0.
[propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo.
Change-Id: I429812ba4c5f5a378d23fe4cc554061c4bb2996c
---
gnu/packages/bioconductor.scm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 519924d084..1472bca9c2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -25995,13 +25995,13 @@ This package wraps C++ code from the MOODS motif
calling library.")
(define-public r-chromvar
(package
(name "r-chromvar")
- (version "1.30.1")
+ (version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "chromVAR" version))
(sha256
- (base32 "1wdsq6cx3y3262kkqa3mw3m0ymja990qwzrv11vpwr22rph74qsp"))))
+ (base32 "13yb4ykcapn0i2w1aav3pm3k8yyhfqkibrabd3fzab5gn9kbwwm9"))))
(properties `((upstream-name . "chromVAR")))
(build-system r-build-system)
(arguments
@@ -26020,7 +26020,6 @@ This package wraps C++ code from the MOODS motif
calling library.")
r-biostrings
r-bsgenome
r-dt
- r-genomeinfodb
r-genomicranges
r-ggplot2
r-iranges
@@ -26034,6 +26033,7 @@ This package wraps C++ code from the MOODS motif
calling library.")
r-rsamtools
r-rtsne
r-s4vectors
+ r-seqinfo
r-shiny
r-summarizedexperiment
r-tfbstools))
