guix_mirror_bot pushed a change to branch kernel-updates
in repository guix.
discard bead7ab82a WIP: Add linux-libre 6.18.
add 3e0c14cad1 gnu: weechat: Update to 4.7.2.
add 073dbbd6c8 gnu: Remove python-lxml-4.7.
add 12a10c20ae gnu: python-braintree: Update to 4.40.0.
add 2817daf518 gnu: python-markuppy: Update to 1.18.
add 265ed14608 gnu: python-csb43: Update to 1.0.0.
add ec78824d81 gnu: python-febelfin-coda: Switch to pyproject.
add 10c40b8272 gnu: python-ofxparse: Switch to pyproject.
add 3803d4ebbd gnu: python-json2html: Switch to pyproject.
add b81c89f255 gnu: python-face: Update to 24.0.0.
add dab784f0ba gnu: python-ordered-set: Switch to pyproject.
add bc0c01de99 gnu: python-orgparse: Update to 0.4.20251020.
add 6a625a7e7a gnu: python-iwlib: Switch to pyproject.
add 28ddb52a84 gnu: Remove openconnect-sso.
add 807d692f5d gnu: nototools: Fix tests.
add de0e5da4dc gnu: nototools: Update to 0.3.2.
add 5ec28a849d gnu: python-afdko: Swap deprecated input.
add 3790ad6938 gnu: python-afdko-3.6.1: Swap deprecated input.
add 3e933e9492 gnu: Remove openmolar-1.
add 5f12c48383 gnu: Remove movim-desktop.
add 70c3b4fa79 gnu: Remove python-neovim-remote.
add 4ae5223db2 gnu: Remove snorenotify.
add 220329e73c gnu: Remove blasr.
add e371d6bbf1 gnu: Remove blasr-libcpp.
add 1ffec44bf2 gnu: Remove pbbam.
add 9103fbd2e6 gnu: Remove pbcopper.
add 792d935233 gnu: perl-bio-db-hts: Swap outdated input.
add c4ebcd5629 gnu: Remove htslib-1.9.
add 480d78c4c4 gnu: Remove htslib-1.14.
add 14ac39aefb gnu: font-monaspace: Update to 1.301.
add b502e5e29f gnu: Add font-hubot-sans.
add c3a3858c93 gnu: Add font-mona-sans.
add e11b178721 gnu: aflplusplus: Enable llvm_mode and afl-clang-lto.
add e8938b2759 gnu: checkmake: Fix man page path.
add 4c3d328719 gnu: pari-gp: Update to 2.17.3.
add 9e97054ad1 gnu: sane-backends: Don't remove dll.conf.
add decaa5830f gnu: python-pyserial-asyncio: Switch to pyproject.
add 94e7d98212 gnu: python-labjack: Update to 2.1.0.
add 0ad0294199 gnu: python-consul: Deprecate in favor of python-py-consul.
add a83a283dc7 gnu: python-schematics: Update to 2.1.1.
add 5f3e41a9fc gnu: python-odfpy: Update to 1.4.2.
add c661878fc7 gnu: python-graphql-relay: Switch to pyproject.
add e4145277f3 gnu: python-setproctitle: Update to 1.3.7.
add 78831e0f31 gnu: python-pefile: Update to 2024.8.26.
add e305a17dfd gnu: python-csscompressor: Switch to pyproject.
add 14e834c219 gnu: python-cheetah: Switch to pyproject.
add e33bd48074 gnu: python-qscintilla: Fix build.
add 768af11d4b gnu: autokey: Improve package style, enable all tests.
add b13e6e627c gnu: autokey: Fix wrapping.
add 3b13a24c61 gnu: autokey: Move to xdisorg.
add 986fd89192 gnu: autokey: Wrap kdialog.
add dbe04d0dd7 gnu: python-typer: Update to 0.20.0.
add f02c8001d7 gnu: Add python-json-log-formatter.
add acf95352b9 tests: debian-install: Fix debian-13 qcow2 image.
add 28d60948a1 tests: debian-install: Use download mirror for uidmap
source.
add e5b9f51519 gnu: tar: Skip another test on powerpc-linux.
add 0901cc1526 gnu: qemu: Skip another test when ipxe-qemu isn't present.
add e5c746b905 gnu: ravanan: Update to 0.2.0.
add 9f1a0275ba gnu: mimalloc: Update to 3.1.5.
add 4fd58a4f8c gnu: quickjs-ng: Update to 0.11.0.
add a40dcf2a62 gnu: edbrowse: Update to 3.8.15.
add f8ed3378cd gnu: python-click-plugins: Update to 2.0.
add 0d8e83034c gnu: python-fiona: Update to 1.9.6.
add a9aa28fef2 gnu: python-kombu: Update to 5.5.4.
add d982a770b7 gnu: python-billiard: Update to 4.2.2.
add b857beb34a gnu: python-celery: Update to 5.5.3.
add 51436611e7 gnu: python-dictdiffer: Switch to pyproject.
add 23a604d98f gnu: python-piexif: Switch to pyproject.
add be609b6907 gnu: python-pyrss2gen: Switch to pyproject.
add da0f28d975 gnu: python-phpserialize: Switch to pyproject.
add 522b8ec97e gnu: python-reedsolo: Update to 1.7.0.
add c575697e8f gnu: python-esprima: Switch to pyproject.
add 06af246bbf gnu: date2name: Update to 0.0-2.50cc8d3.
add 0f698c5f07 gnu: date2name: Move to calendar.
add 3197c5348b gnu: trealla: Update to 2.85.13.
add 13e8266397 shell: Ensure graft? is used in profile cache key.
add def983628e pack: Address DT_UNKNOWN case for exotic filesystems.
add 9dcc67c695 gnu: guile-extensible-match: Update to 0.875.
add 6be56bcbf8 gnu: fonts: Add font-inter.
add f89bbcb653 image: export efi32-disk-image.
add 92fbb1f82b bootloader: grub: Add grub-efi32-removable-bootloader.
add 5e5ac81e95 image: Add support for f2fs.
add 35770c78a2 image: Add support for swap.
add 6c8b81ee57 ui: Change module import suggestion string.
add 5e63c9bdb1 gnu: hetzner: Fix deploy on hetzner
add d033f0e3be gnu: guile-knots: Update to 0-26.3eba6fc.
add bb271bb2ca gnu: guix-build-coordinator: Update to 0-134.4c9ebed.
add 8959dadab5 gnu: thunar: Update to 4.20.6.
add 9bf546b736 gnu: sgt-puzzles: Update to 20251120.
add 5443917095 gnu: pavucontrol: Update to 6.2.
add 0c85b302f0 gnu: swayimg: Update to 4.6.
add 6b988aa682 gnu: mtxclient: Update to 0.10.1.
add b2a4c114f3 gnu: nheko: Update to 0.12.1.
add 4d06e45944 gnu: fdupes: Update to 2.4.0.
add 232f3a9886 Revert "gnu: wesnoth: Update to 1.19.18."
add c3e73a1cb0 gnu: wireshark: Update to 4.6.1.
add 65e870d0a0 gnu: siege: Update to 4.1.7.
add 9ab67d2e45 gnu: whois: Update to 5.6.5.
add 5318976f8f gnu: iputils: Update to 20250605.
add 290cee3c0a gnu: praat: Update to 6.4.47.
add a7836570f2 gnu: httping: Update to 4.4.0.
add 21fa45f45c gnu: guile-knots: Update to 0-27.8100d36.
add 9bd74d89f0 gnu: guix-build-coordinator: Update to 0-135.88b0416.
add 5db3da8811 tests: guix: Remove %nar-herder-os from the end of the
module.
add 3c530361e6 gnu: Add hyprmag.
add 41ff43f5de gnu: dhcpcd: Update to 10.3.0.
add a97ea10a01 gnu: gocryptfs: Update to 2.6.1.
add 71e6a206d9 gnu: go-github-com-pelletier-go-toml-v2: Update to 2.2.4.
add bdbc85b792 gnu: Add specification-yaml-test-suite.
add 07bb1a6db3 gnu: Add go-go-yaml-in-yaml-v4.
add a1c2dcd80e gnu: Add go-yaml.
add c7142e3107 gnu: yq: Update to 4.49.1.
add 01ed8d5633 gnu: go-github-com-oklog-ulid-v2: Update to 2.1.1.
add 0725475014 gnu: go-mvdan-cc-gofumpt: Update to 0.9.2.
add 7ce8f5e0c1 gnu: hebcal: Update to 5.9.4.
add 5550a8cd62 gnu: Add go-github-com-jmhodges-levigo.
add 821ca97904 gnu: Add go-gopkg-in-fsnotify-v1.
add 892a2b6285 gnu: Add go-github-com-omniscale-go-osm.
add 8fa839ce68 gnu: imposm3: Unvendor.
add 824c6a0a60 gnu: go-jose-util: Inherit from
go-github-com-go-jose-go-jose-v4.
add b9aef524a4 gnu: go-github-com-go-jose-go-jose-v4: Update to 4.0.5.
add c2a68922c3 gnu: go-github-com-zitadel-oidc-v3: Update to 3.45.0.
add 23e85d1b6e gnu: python-pydispatcher: Update to 2.0.7.
add e5a2a9806f gnu: python-pyee: Update to 13.0.0.
add cf67f4b0a6 gnu: python-queuelib: Update to 1.8.0.
add c6ed036bd3 gnu: python-posix-ipc: Update to 1.3.2.
add 8dd23cb291 gnu: python-itemadapter: Update to 0.12.0.
add 15ad3ce3be gnu: python-hypy-utils: Update to 1.0.29.
add cd49d8141d gnu: python-cymem: Switch to pyproject.
add 7516485525 gnu: python-preshed: Switch to pyproject.
add cd4ec00842 gnu: python-gatt: Switch to pyproject.
add 885fc047ef gnu: python-biblib: Switch to pyproject.
add bcedef2d74 gnu: python-geomet: Update to 1.1.0.
add 8164aaa13c gnu: python-pyscss: Fix build by addig python-six.
add 69d708ff28 gnu: python-libfreenect: Fix build with gcc-1.14.
add 8dbfb0202b gnu: python-i3ipc: Move to (gnu packages wm).
add f832d16f02 gnu: i3-autotiling: Move to (gnu packages wm).
add 7eb79a5e58 gnu: python-cyclic: Switch to pyproject.
add 4752e43eb0 gnu: python-rcslice: Switch to pyproject.
add b225dcf0d7 gnu: python-nanoid: Switch to pyproject.
add 2e06aadd33 gnu: python-misskey: Switch to pyproject.
add 3aeaf1da45 gnu: python-pymonad: Switch to pyproject.
add e1cc126ed7 gnu: python-markdown-strings: Switch to pyproject.
add 73fe38fd56 import: pypi: Improve license detection.
add d66e9698a1 import: pypi: Enforce home-page https prefix.
add 92c2333350 import: pypi: Use git-fetch when possible.
add 4f3d9137a1 import: pypi: Improve home-page detection.
add ab92b81c90 gnu: Remove zbackup.
add 2c0e147a7f gnu: Remove python-pyside-2-tools.
add 45a1796ca6 gnu: Remove mlucas.
add 3a48bbf383 gnu: gambit-c: Update to 4.9.7.
add 9b6ed48395 gnu: python-rencode: Prevent native comp.
add d3e8c33566 gnu: python-rencode: Move to serialization.
add 11c65425d8 gnu: python-rencode: Make tunable
add fca58e725f gnu: tmate: Update to 2.4.0-0.ac91951.
add 63c4ff7fd1 gnu: python-beziers: Update to 0.6.0.
add e1608b0025 gnu: python-cffsubr: Switch to pyproject.
add b7bcb900c7 gnu: python-fontpens-bootstrap: Switch to pyproject.
add 219a252310 gnu: python-glyphsets: Switch to pyproject.
add e698cd05d3 gnu: python-opentype-sanitizer: Switch to pyproject.
add 47809a119d gnu: python-mutatormath: Switch to pyproject.
add 5e04db03fe gnu: python-sfdlib: Update to 1.2.5.
add e661bca4b7 gnu: python-ufoprocessor: Update to 1.14.1.
add 5d89feb4a7 gnu: nototools: Switch to pyproject.
add aaf432248f gnu: python-opentype-sanitizer: Update to 9.2.0.
add 613fe421ea gnu: dosage: Update to 3.2.
add a06695ec55 gnu: dosage: Move propagated inputs to inputs.
add cf8bb791f6 gnu: trealla: Update to 2.85.18.
add 12dabd127f .guix-authorizations: Register csantosb's key.
add b09bfcb1eb gnu: nss-rapid: Update to 3.118.1.
add 60b6c5bdc2 gnu: firefox-l10n: Update to
74fe0b1805ed82dd5e27092a7d0f970c68207f2f.
add c93b89e591 gnu: librewolf: Update to 145.0.1-2 [security-fixes].
add f3da664694 gnu: Remove skktools.
add b85f7ca96f gnu: Remove python-scandir.
add 6e5a38ce03 gnu: Remove python-flask-misaka.
add e9c4dc10bf gnu: Remove python-misaka.
add 8f7ba9697b gnu: Remove opensmtpd-extras.
add 8ce4353723 gnu: Remove python-future-fstrings.
add 279df705b4 gnu: Remove python-axolotl.
add 3a7556ccb6 gnu: Remove pinentry-qt5.
add 7b1fdc56e0 gnu: gmsh: Switch to G-exps.
add 1502c830a6 gnu: gmsh: Do not propagate inputs.
add 2ca430fb89 gnu: guile-fibers-next: Update to 1.4.2-0.297359f.
add f8d9981bc0 gnu: guile-knots: Update to 0-28.a8e07b7.
add 5df3514ab0 system: image: Factor out testing for grub-efi bootloader.
add 1dfe1ebdf6 system: image: Don't add grub-efi to the build closure
unless needed.
add 3a95404e15 system: image: Expand list of bootloaders using grub-efi.
add bfb049f51c gnu: Add book-emacs-lisp-elements.
add 434e93b930 gnu: libdab: Update to 0.8-2.dfacdcd.
add a2970aab6b gnu: sdrangel: Update to 7.22.4.
add 4bb979bb15 gnu: emacs-elisp-autofmt: Update to 0.1-1.c276564.
add 8732f89aea gnu: emacs-disproject: Build manual.
add 3995e51f75 gnu: Add emacs-agitjo.
add 9afa48113a gnu: python-pypika: Update to 0.49.0.
add 27cf3437aa gnu: Add python-psptrace.
add 7c28753d9e gnu: python-psptool: Update to 3.1.
add 2b2889137f gnu: mbed-tools: Update to 7.59.0.
add bc4297daa9 gnu: open-simulation-interface: Switch to pyproject.
add 720b0aa871 gnu: python-fenics-ufl: Update to 2025.2.0.
add a978dc3d3e gnu: Add python-fenics-ufl-2019.
add 98d4c1daeb gnu: python-fenics-ffc: Switch to pyproject.
add 5cbbbc609f gnu: python-commonroad-vehicle-models: Switch to pyproject.
add ebf4dccced gnu: python-commonroad-io: Switch to pyproject.
add 99e0ae2431 gnu: python-commonroad-route-planner: Switch to pyproject.
add c63083b2a1 gnu: fenics: Switch to pyproject.
add a511728210 gnu: python-meshio: Update to 5.3.5.
add ec53e575fc gnu: Add python-stripe-12.
add 16248a958d gnu: python-mt940: Update to 0.7.0.
add 50b7968f79 gnu: python-sql: Update to 1.7.0.
add 321e33c0b7 gnu: trytond: Update to 7.0.40.
add 237395a2f4 gnu: tryton: Update to 7.0.29.
add 73f2766c88 gnu: trytond-account-payment-clearing: Update to 7.0.6.
add 374254a24c gnu: trytond-account-payment-stripe: Update to 7.0.5.
add 3783bd6a22 gnu: trytond-account-statement: Update to 7.0.5.
add 08ea220e03 gnu: trytond-account-statement-rule: Update to 7.0.2.
add 63d29ebae1 gnu: trytond-account-stock-eu: Update to 7.0.6.
add b1b9d88db8 gnu: trytond-account-tax-non-deductible: Update to 7.0.1.
add 9208c7b65b gnu: trytond-document-incoming-invoice: Update to 7.0.1.
add 9c3f49b3d7 gnu: trytond-incoterm: Update to 7.0.3.
add 9d4fc986e5 gnu: trytond-product-price-list-dates: Update to 7.0.1.
add 40d7d67173 gnu: trytond-production-outsourcing: Update to 7.0.2.
add 80dba9a9ad gnu: trytond-purchase: Update to 7.0.15.
add ca9d4aef5a gnu: trytond-sale-discount: Update to 7.0.2.
add 4d6956ed4b gnu: trytond-sale-point: Update to 7.0.3.
add 7637eb466c gnu: trytond-stock-supply: Update to 7.0.5.
add 94326a4e33 gnu: trytond-web-shop-shopify: Update to 7.0.12.
add 2d03c4d23b gnu: python-sphinxcontrib-newsfeed: Switch to pyproject.
add a33532a008 gnu: python-sphinx-tabs: Update to 3.4.7.
add d44759c562 gnu: python-sphinxcontrib-svg2pdfconverter: Switch to
pyproject.
add f8bbb9a3f6 gnu: python-sphinx-me: Switch to pyproject.
add 973816c38f gnu: python-sphinx-argparse: Update to 0.5.2.
add aa2c544f6e gnu: python-guzzle-sphinx-theme: Switch to pyproject.
add f6f7cfd62d gnu: python-mpl-sphinx-theme: Switch to pyproject.
add 4c0632ba2d gnu: python-sphinx-intl: Switch to pyproject.
add 029353d5df gnu: python-sphinxext-opengraph: Switch to pyproject.
add a6c51c83f0 gnu: unbound: Update to 1.24.2. [security-fixes]
add 78403d98a4 gnu: reuse: Update to 6.2.0.
add 023bba9441 gnu: python-pybiomart: Remove python-sphinx-autobuild
native-input.
add 59b6a730a6 gnu: repo2docker: Remove python-sphinx-autobuild
native-input.
add 5f00848dc5 gnu: python-sphinx-autobuild: Switch to pyproject.
add 206004403c gnu: python-sphinx-autobuild: Update to 2025.08.25.
add c1ea57265a gnu: python-sphinxcontrib-autoprogram: Update to 0.1.9.
add 2078e378d2 gnu: python-sphinx-theme-builder: Switch to pyproject.
add 3eb585c899 gnu: python-sphinx-sitemap: Switch to pyproject.
add 67aa42fce3 gnu: python-invoke: Workaround a recent regression with
entry points.
add a43b354901 gnu: python-invoke: Update to 2.2.1.
add 4dc86c7ea8 gnu: parallel: Update to 20251122.
add 257d328f90 gnu: parallel: Separate out the doc directory.
add efa66879a8 gnu: guile-drmaa: Fix build.
add 706c2fa0a9 gnu: tecoc: New package.
add 14531a1eb8 graph: graphml backend: simplification
add afd1ce3c60 gnu: Add amd-smi.
add 00c3ceb87c gnu: Fix licenses for ROCm packages.
add 912bcbdf49 gnu: exim: Enable forward and reverse proxy.
add 48fa6de736 gnu: Add bcachefs-linux-module.
add 640309cbd1 gnu: Add emacs-form-feed-st.
add c59a467c61 gnu: Add emacs-mlscroll.
add 945d03228e gnu: Add emacs-elisp-def.
add ff5eb0811f gnu: dcmtk: Update to 3.6.9.
add 775dbde5a4 gnu: mu: Add additional file to patch-bin-references phase.
add 4d1a35a5ee gnu: udiskie: Update to 2.5.8.
add 55e95de197 gnu: blueman: Update to 2.4.6.
add d4c0fd687b gnu: Remove subversion/pinned.
add 1d10e15f72 gnu: Remove mercurial/pinned.
add fcc3953095 gnu: duperemove: Update to 0.15.2.
add c1080cb745 gnu: Add dpic.
add 81a066eb91 gnu: Rename (gnu packages pikchr) into (gnu packages
diagram)
add ef04d631bd etc: committer: Fix crashes when inputs only change order.
add bd9a24ec18 gnu: symbiyosys: Fix build.
add 5348b1f181 gnu: Rename variable symbiyosys to sby.
add 78330f527b gnu: Add sby-gui.
add 98966b7910 gnu: Add mcy.
add 1ddfcfdc96 gnu: Add eqy.
add e4c8f01daf gnu: libpoly: Update to 0.2.0.
add bc697fd478 gnu: yices: Update to 2.7.0.
add 00c44c9400 gnu: sby: Fix typo.
add d67d6cb583 gnu: Add python-jschon.
add cbce80e99f gnu: Add python-pyvcd.
add 6a85c6fb1c gnu: Add python-amaranth.
add fa9df45168 gnu: python-pytest-mockito: Update to 0.0.5.
add 97f62ca316 gnu: python-pytest-repeat: Update to 0.9.4.
add 60745b6fa1 gnu: python-pytest-tornasync: Switch to pyproject.
add c7e4c24a64 gnu: python-bash-kernel: Update to 0.10.0.
add c77a394072 gnu: python-sparqlkernel: Switch to pyproject.
add 8a3cb943da gnu: python-jupyter-packaging: Switch to pyproject.
add 4af4a7f9af gnu: python-libusb1: Switch to pyproject.
add b39ced1966 gnu: python-pyusb: Switch to pyproject.
add ffa4ce6b72 gnu: python-hidapi: Switch to pyproject.
add 56bd65a410 gnu: licenseheaders: Update to 0.8.8.
add d3600a04c9 gnu: unoconv: Switch to pyproject.
add c9eb69ddbf gnu: liquidctl: Update to 1.15.0.
add c105409804 gnu: Add libpsf.
add b5f91bd821 gnu: quickshell: Remove custom build & install phases.
add f48ceed435 gnu: quickshell: Install QML shared objects & definitions.
add b9717c2ea0 gnu: qutebrowser: Update to 3.6.2.
add 537895fec7 gnu: nvc: Update to 1.18.2.
add af5812c452 gnu: verilator: Update to 5.042.
add e62a6b6c6e gnu: Add slurm-minimal-25.05.
add dffaaf19c2 gnu: cmake-build: Prevent stalls initiating tests.
add 201cd120dd gnu: cmake-bootstrap: Update to 3.31.10.
add f873ae0cf6 gnu: cmake: Update to 4.1.3.
add 8cbe98c8b4 gnu: ninja: Update to 1.13.2.
add 0091d0e7c8 gnu: folly: Update to 2025.11.10.00.
add df0c61469f gnu: taskflow: Update to 3.10.0.
add c4bcacb70a gnu: dealii: Update to 9.7.1.
add e2d04e31c5 gnu: snapcast: Update to 0.34.0.
add 9a2ab57967 gnu: opencascade-occt-7.6.1: Fix source origin.
add d508545fef gnu: libdjinterop: Mark tests as disabled.
add 974196e09e gnu: bloomberg-bde: Disable test.
add 97d9c63265 gnu: googletest: Update to 1.17.0.
add 1aebfc74f1 gnu: boost: Update to 1.89.0.
add 7cb5793ed7 gnu: valgrind/pinned: Update to 3.25.1.
add e2c9828d4d gnu: valgrind: Update to 3.26.0.
add 9cf9e76b1c gnu: abseil-cpp: Update to 20250814.1.
add 4100c8e021 gnu: google-highway: Update to 1.3.0.
add 091fa030fe gnu: lziprecover: Update to 1.25.
add 6247152436 gnu: lz4: Update to 1.10.0.
add c2932c5af3 gnu: plzip: Update to 1.12.
add 788de2f54f gnu: jq: Update to 1.8.1.
add 1811a3dd82 gnu: Remove stgit.
add 04e9e4a462 gnu: git-minimal: Update to 2.52.0.
add 17c3c275fd gnu: slurm-drmaa: Patch to allow building with Slurm 25.
add 74320f95d1 gnu: guile-drmaa: Update to 0.2.1.
add 8b6da7f8aa gnu: yosys: Default to clang backend.
add 2484844eac gnu: Remove references to deprecated ‘yosys-clang’.
add e736d781a1 gnu: yosys: Reduce closure size.
add 2fb457cc3f gnu: yosys: Update to 0.59.1.
add 7d002b6f88 gnu: emacs-org-social: Update to 2.7.1.
add fdb4688f9f gnu: visidata: Update to 3.3.
add e73ac4c5e7 gnu: trealla: Update to 2.86.5.
add d65b8b4fa1 gnu: Add sbcl-mito-auth
add 62a030096f gnu: Add emacs-openssl-cipher.
add d9f1955082 gnu: Add emacs-kaesar.
add 114022dc12 gnu: Add emacs-elchacha.
add 141d7e3572 gnu: Add emacs-elkee.
add 063fc0e213 gnu: Add emacs-info-rename-buffer.
add fe85236941 gnu: Add emacs-compile-angel.
add 55fda7c841 gnu: wlroots: Update to 0.19.2 with bug fixes.
add 383fb009c8 gnu: libxml2-with-zlib: Use PACKAGE/INHERIT.
add ad87b718ed import/cran: Reduce false positives in extracting imports.
add b215cb2027 import/cran: Detect library references in "check_installed".
add fe00098268 gnu: Add r-otel.
add 4fbcea527c gnu: Add r-cleanrmd.
add 5ffb36a92e gnu: Add r-dynlm.
add 971102a47c gnu: Add r-sym-arma.
add 4098b09afb gnu: Add r-transport.
add 2997071cd3 gnu: Add r-priorsense.
add 2a4bc83d4c gnu: Add r-ggpol.
add 1769270697 gnu: Add r-splancs.
add 18b181c8f5 gnu: Add r-nanoparquet.
add 8f744aad6f gnu: Add r-manipulate.
add 79486450bb gnu: Add r-kernelshap.
add b1e930f5c9 gnu: Add r-qs2.
add cde6f01d4b gnu: Add r-dagitty.
add 3005791dc2 gnu: Add r-ggdag.
add 1f440162e5 gnu: Add r-snowflakeauth.
add 5b350644ff gnu: Add r-quantregforest.
add 2b7be43f30 gnu: Add r-tailor.
add 368ba3a629 gnu: Add r-probably.
add 34f8e1a563 gnu: Add r-ggiraph.
add ea40710a89 gnu: Add r-lsoda.
add 8e871e1163 gnu: Add r-unitizer.
add 272cdb9acd gnu: apache-arrow: Update to 22.0.0.
add 5b4e88d5ac gnu: r-arrow: Update to 22.0.0.
add d4294fbcea gnu: r-dtt: Update to 0.1-2.1.
add 2ced4fd7d2 gnu: r-lintr: Disable two failing tests.
add c652f0d98e gnu: r-duckdb: Update to 1.4.1.
add 1617d61a08 gnu: r-rversions: Update to 3.0.0.
add 9243d12d28 gnu: r-testthat: Update to 3.3.0.
add fdbbd8d90b gnu: r-tibble: Update to 3.3.0.
add b7b13b8c67 gnu: r-roxygen2: Update to 7.3.3.
add bc9ddfe0c5 gnu: r-sfsmisc: Update to 1.1-22.
add 3f2992265e gnu: r-robustbase: Update to 0.99-6.
add c88e3fe86b gnu: r-plotly: Update to 4.11.0.
add 904566e7e8 gnu: r-purrr: Update to 1.2.0.
add a39c4840a3 gnu: r-shiny: Update to 1.11.1.
add 79f81ecc02 gnu: r-leaflet: Update to 2.2.3.
add 91f0367d7f gnu: r-visnetwork: Update to 2.1.4.
add 4366b69b8e gnu: r-afex: Update to 1.5-0.
add fc58de09e0 gnu: r-elliptic: Update to 1.5-1.
add 788c2eba8b gnu: r-dendextend: Update to 1.19.1.
add 2f2b91f95b gnu: r-viridis: Add missing test input.
add 699f519468 gnu: r-logger: Update to 0.4.1.
add 50ce1936db gnu: r-aer: Update to 1.2-15.
add 029e45f4b9 gnu: r-batchtools: Update to 0.9.18.
add 80d9979292 gnu: r-mlr: Update to 2.19.3.
add dbdfaf2cb7 gnu: r-gsl: Update to 2.1-9.
add b6926012a7 gnu: r-fmesher: Update to 0.5.0.
add 8af27993b4 gnu: r-ggpmisc: Update to 0.6.2.
add 0332698be0 gnu: r-mlr3pipelines: Update to 0.10.0.
add 45ff2d225a gnu: r-flextable: Update to 0.9.10.
add d2224860bc gnu: r-tcltk2: Update to 1.6.1.
add 6908531e46 gnu: r-gargle: Update to 1.6.0.
add 3f249dbadf gnu: r-gmisc: Update to 3.0.4.
add 790af31bee gnu: r-bigrquery: Update to 1.6.1.
add 5f07fdc925 gnu: r-survey: Update to 4.4-8.
add b780de08f7 gnu: r-glmmtmb: Update to 1.1.13.
add 605cfc7c17 gnu: r-vroom: Update to 1.6.6.
add 60964dea19 gnu: r-crul: Update to 1.6.0.
add e3084fb8b3 gnu: r-webmockr: Update to 2.2.0.
add ed17b668bd gnu: r-remacor: Update to 0.0.20.
add 060d77487e gnu: r-udunits2: Update to 0.13.2.2.
add c58bfca33e gnu: r-styler: Update to 1.11.0.
add 209e4ba518 gnu: r-dbplyr: Update to 2.5.1.
add 42cec93fdb gnu: r-later: Update to 1.4.4.
add 9f336f5823 gnu: r-data-tree: Update to 1.2.0.
add 63df4e1b94 gnu: r-fixest: Update to 0.13.2.
add eceba2c56e gnu: r-htmltools: Disable one test.
add b58003bed7 gnu: r-crosstalk: Update to 1.2.2.
add 8261a20447 gnu: r-timedate: Update to 4051.111.
add e729c71f0d gnu: r-nanonext: Update to 1.7.2.
add e50d44c277 gnu: r-ggdist: Disable one network test.
add 28e03d827b gnu: r-rprojroot: Update to 2.1.1.
add 74babcaa8b gnu: r-rmarkdown: Update to 2.30.
add 4cff036dbb gnu: r-evaluate: Update to 1.0.5.
add af251d54d2 gnu: r-gfonts: Disable tests requiring Internet access.
add 37bcb05a86 gnu: r-gwidgets2tcltk: Update to 1.0-9.
add 318c97e92c gnu: r-vcr: Update to 2.0.0.
add 954ce0a568 gnu: r-pkgdown: Update to 2.2.0.
add e548d95712 gnu: r-performance: Update to 0.15.2.
add b481eacbab gnu: r-rio: Update to 1.2.4.
add 9dbd122aa6 gnu: r-workflows: Update to 1.3.0.
add 808bf3f76d gnu: r-ggplot2: Update to 4.0.0.
add f6b29b97b6 gnu: r-ggformula: Update to 1.0.0.
add f1ca8f7ea5 gnu: r-dt: Update to 0.34.0.
add 6de8101712 gnu: r-qtl2: Update to 0.38.
add a328e799e7 gnu: r-futile-logger: Adjust to removed test procedures in
testthat.
add de97154d21 gnu: r-invgamma: Update to 1.2.
add 72daa56a84 gnu: r-emdbook: Update to 1.3.14.
add 05cd678b56 gnu: r-abn: Update to 3.1.9.
add 9917937709 gnu: r-cpp11bigwig: Update to 0.1.2.
add 61d18d715f gnu: r-dsb: Update to 2.0.1.
add ddb133e9ac gnu: r-infusion: Update to 2.3.0.
add 79c2fb3122 gnu: r-netgsa: Update to 4.0.6.
add 5c193342bf gnu: r-numbat: Update to 1.5.1.
add 48eb1967cd gnu: r-restfulr: Update to 0.0.16.
add 26e7763e78 gnu: r-scgate: Update to 1.7.2.
add 393e9aa3c2 gnu: r-valr: Update to 0.8.4.
add 7f220a8605 gnu: r-ggm: Update to 2.5.2.
add 4efcf6cb63 gnu: r-ggpicrust2: Update to 2.5.2.
add 6e1add28c2 gnu: r-classdiscovery: Update to 3.4.9.
add 4274208512 gnu: r-activepathways: Update to 2.0.6.
add e49c5f421c gnu: r-acepack: Update to 1.6.3.
add dcb7418e57 gnu: r-aster: Update to 1.3-6.
add d5e2b83e85 gnu: r-batchjobs: Update to 1.10.
add 78cb3a3480 gnu: r-betareg: Update to 3.2-4.
add 3230848a7c gnu: r-bigassertr: Update to 0.1.7.
add 2929ba6a25 gnu: r-bigstatsr: Update to 1.6.2.
add e8852c0150 gnu: r-boot: Update to 1.3-32.
add 159c816ced gnu: r-broom-helpers: Update to 1.22.0.
add a41d96b6c0 gnu: r-cairo: Update to 1.7-0.
add 6037e848dd gnu: r-cards: Update to 0.7.0.
add 8d6427457e gnu: r-cardx: Update to 0.3.0.
add ac5599c51d gnu: r-castor: Update to 1.8.4.
add 20959f63bf gnu: r-cftime: Update to 1.7.2.
add 2d8358c30f gnu: r-checkmate: Update to 2.3.3.
add 7e3386cd27 gnu: r-clubsandwich: Update to 0.6.1.
add 039523fd0c gnu: r-celestial: Update to 1.5.8.
add e3e02eb755 gnu: r-commonmark: Update to 2.0.0.
add 648d14d387 gnu: r-compquadform: Update to 1.4.4.
add 06917a7385 gnu: r-collapse: Update to 2.1.4.
add d8ebfb9239 gnu: r-collections: Update to 0.3.9.
add 6088f9ef01 gnu: r-correlation: Update to 0.8.8.
add fa57a71b6f gnu: r-cowplot: Update to 1.2.0.
add b0253bd437 gnu: r-crew: Update to 1.3.0.
add bf1d7a264c gnu: r-cubist: Update to 0.5.1.
add 1cdc3b970d gnu: r-cutpointr: Update to 1.2.1.
add 55e5328ee4 gnu: r-data-table: Update to 1.17.8.
add 055d78899c gnu: r-datawizard: Update to 1.3.0.
add 68d99675b5 gnu: r-dbscan: Update to 1.2.3.
add dca743c9b3 gnu: r-deoptimr: Update to 1.1-4.
add fb408a39b5 gnu: r-devtools: Update to 2.4.6.
add def1dfc481 gnu: r-dfidx: Update to 0.2-0.
add c1926ee946 gnu: r-digest: Update to 0.6.38.
add 836fd24420 gnu: r-diptest: Update to 0.77-2.
add 452f5fd1fb gnu: r-dirichletreg: Update to 0.7-2.
add 67e4256fc6 gnu: r-effects: Update to 4.2-4.
add ccbded4857 gnu: r-forcats: Update to 1.0.1.
add fff3cd4bab gnu: r-fuzzyjoin: Update to 0.1.6.1.
add ef4a0f83ab gnu: r-gdtools: Update to 0.4.4.
add 38785bc983 gnu: r-ggbreak: Update to 0.1.6.
add 586844a4fa gnu: r-ggstats: Update to 0.11.0.
add 0783c70509 gnu: r-ggstatsplot: Update to 0.13.3.
add 9cfa51ea7e gnu: r-ggsurvfit: Update to 1.2.0.
add 008435752d gnu: r-gld: Update to 2.6.8.
add 60379681ff gnu: r-glmnet: Update to 4.1-10.
add 969e309b17 gnu: r-gmm: Update to 1.9-1.
add a76654c079 gnu: r-googledrive: Update to 2.1.2.
add c83666449e gnu: r-gunifrac: Update to 1.9.
add 6c47070c2c gnu: r-googlesheets4: Update to 1.1.2.
add 8b903484f0 gnu: r-pbapply: Update to 1.7-4.
add c819c936ed gnu: r-pbkrtest: Update to 0.5.5.
add d9317f8fbe gnu: r-permute: Update to 0.9-8.
add f72c546789 gnu: r-puniform: Update to 0.2.8.
add 7e680e8de8 gnu: r-reshape2: Update to 1.4.5.
add cc08deef91 gnu: r-rpushbullet: Update to 0.3.5.
add 6401e088f8 gnu: r-rush: Update to 0.4.1.
add 4d7abbeeef gnu: r-waldo: Update to 0.6.2.
add bb75540759 gnu: r-bife: Update to 0.7.3.
add 0b1beb47fa gnu: r-bipartite: Update to 2.23.
add 80e038eb1b gnu: r-v8: Update to 8.0.1.
add 754f08dfa8 gnu: r-carrier: Update to 0.3.0.4.
add 85b5a17cb3 gnu: r-climaemet: Update to 1.4.2.
add 76a04c6f49 gnu: r-climatol: Update to 4.3-0.
add c2603d9a9d gnu: r-zcompositions: Update to 1.5.0-5.
add a8062135c6 gnu: r-ggpp: Update to 0.5.9.
add b0b0b3cf79 gnu: r-ggprism: Update to 1.0.7.
add 4c1c499366 gnu: r-ggvenn: Update to 0.1.19.
add f6a1b8cce0 gnu: r-ggvenndiagram: Update to 1.5.4.
add 0993efa5c8 gnu: r-latticeextra: Update to 0.6-31.
add ceb41914ec gnu: r-ggside: Update to 0.4.0.
add db1192278c gnu: r-gprofiler2: Update to 0.2.4.
add 68e56af0e1 gnu: r-openssl: Update to 2.3.4.
add f519088b9c gnu: r-stringr: Update to 1.6.0.
add 7f8f6f868a gnu: r-svglite: Update to 2.2.2.
add 1cc2d9c7bb gnu: r-pagoda2: Update to 1.0.13.
add 5be6ed3502 gnu: r-papaja: Update to 0.1.4.
add ddace41537 gnu: r-paralleldist: Update to 0.2.7.
add a7ac3aad19 gnu: r-pheatmap: Update to 1.0.13.
add b87b86568f gnu: r-philentropy: Update to 0.10.0.
add 6d7bdfa7b1 gnu: r-plm: Update to 2.6-7.
add 944be6c5d1 gnu: r-ecdat: Update to 0.4.7.
add 876888ec7c gnu: r-ecfun: Update to 0.4.0.
add 74086006d8 gnu: r-greg: Update to 2.0.3.
add 025c0a9fd9 gnu: r-magrittr: Update to 2.0.4.
add 623c281a64 gnu: r-marginaleffects: Update to 0.30.0.
add b2935e92b0 gnu: r-matrix: Update to 1.7-4.
add 5a25996b3c gnu: r-matrixtests: Update to 0.2.3.1.
add fa580a5586 gnu: r-mclust: Update to 6.1.2.
add a9ac778089 gnu: r-memoise: Update to 2.0.1.
add 3a3d57e530 gnu: r-mgcv: Update to 1.9-4.
add de29f3ced4 gnu: r-mirai: Update to 2.5.2.
add 366a0fab36 gnu: r-multilevel: Update to 2.7.1.
add d86945b001 gnu: r-shadowtext: Update to 0.1.6.
add 9ff1c574c5 gnu: r-astsa: Update to 2.3.
add fd1dbc1e3c gnu: r-vegan: Update to 2.7-2.
add a9f3b70d26 gnu: r-tgstat: Update to 2.3.29.
add 1329cc9c43 gnu: r-tmvtnorm: Update to 1.7.
add 372eb48130 gnu: r-redux: Update to 1.1.5.
add 4f82df6863 gnu: r-repmis: Update to 0.5.1.
add 04f4943956 gnu: r-morpho: Update to 2.13.
add 7b1f407570 gnu: r-hmisc: Update to 5.2-4.
add f7e1372431 gnu: r-hms: Update to 1.1.4.
add 2c3eb4612e gnu: r-httptest2: Update to 1.2.1.
add d752b26d8c gnu: r-httr2: Update to 1.2.1.
add 2b662314f6 gnu: r-curl: Update to 7.0.0.
add d54126fda5 gnu: r-rstpm2: Update to 1.7.1.
add 93337888a3 gnu: r-safetensors: Update to 0.2.0.
add 5225869c33 gnu: r-shinydashboardplus: Update to 2.0.6.
add 0b23aed08a gnu: r-webfakes: Update to 1.4.0.
add 880a96e7f6 gnu: r-mbess: Update to 4.9.41.
add 05b45dffb6 gnu: r-ggtangle: Update to 0.0.8.
add 7c63bc3b53 gnu: r-spelling: Update to 2.3.2.
add 66fc032055 gnu: r-caper: Update to 1.0.4.
add 2e40f23bd1 gnu: r-mirt: Update to 1.45.1.
add bc0a5efdf7 gnu: r-rgooglemaps: Update to 1.5.3.
add a83fa1869a gnu: r-ggmap: Update to 4.0.2.
add 8bd2058171 gnu: r-colorspace: Update to 2.1-2.
add 6ee8aa9f8b gnu: r-pkgload: Update to 1.4.1.
add f4437aece4 gnu: r-pki: Update to 0.1-15.
add dc5c555c91 gnu: r-rcpp: Update to 1.1.0.
add 53d2c7146d gnu: r-rcppdist: Update to 0.1.1.1.
add d9df3afb31 gnu: r-rcppspdlog: Update to 0.0.23.
add 337ee68d95 gnu: r-rcppxptrutils: Update to 0.1.3.
add e4465e99f1 gnu: r-circstats: Update to 0.2-7.
add 16c9afcc47 gnu: r-ctrdata: Update to 1.25.0.
add 71faaba8b1 gnu: r-ctrialsgov: Update to 0.2.7.
add 651768b2d3 gnu: r-reshape: Update to 0.8.10.
add 112d13da85 gnu: r-ggally: Update to 2.4.0.
add a7b3ea71ea gnu: r-lambertw: Update to 0.6.9-2.
add 00f5cc093e gnu: r-lamw: Update to 2.2.5.
add 8986cfbea4 gnu: r-lmoments: Update to 1.3-2.
add 51d7041ac6 gnu: r-inext: Update to 3.0.2.
add d22bdbfe96 gnu: r-limsolve: Update to 2.0.1.
add aec56c2804 gnu: r-litedown: Update to 0.8.
add d4b66f1257 gnu: r-fitdistrplus: Update to 1.2-4.
add a6510ec135 gnu: r-suntools: Update to 1.1.0.
add 87c286bb85 gnu: r-ksamples: Update to 1.2-12.
add b811f0ceef gnu: r-progressr: Update to 0.18.0.
add 355011b537 gnu: r-lava: Update to 1.8.2.
add 5064c631ff gnu: r-magicaxis: Update to 2.5.1.
add 7d3e9e63e6 gnu: r-psych: Update to 2.5.6.
add 7824621a3d gnu: r-psychotools: Update to 0.7-5.
add 5d8c78c281 gnu: r-psychotree: Update to 0.16-2.
add 78ccf1080f gnu: r-broom: Update to 1.0.10.
add aae4d1b7eb gnu: r-statsexpressions: Update to 1.7.1.
add 2114ac8e20 gnu: r-rsolnp: Update to 2.0.1.
add ed4b774ca7 gnu: r-hardyweinberg: Update to 1.7.9.
add 9cb6e27bd6 gnu: r-smurf: Update to 1.1.8.
add 470258bd2f gnu: r-ggridges: Update to 0.5.7.
add 75ba505bc5 gnu: r-webchem: Update to 1.3.1.
add 22efea675d gnu: r-seriation: Update to 1.5.8.
add 9c0afe752a gnu: r-xfun: Update to 0.54.
add eac504f1b3 gnu: r-utf8: Update to 1.2.6.
add 2014a4e6ab gnu: r-pillar: Update to 1.11.1.
add 03b7b3dfdc gnu: r-name: Update to 0.0.2.
add 4a1e74f7b8 gnu: r-ncdfcf: Update to 0.7.0.
add d7c7a44458 gnu: r-numero: Update to 1.10.1.
add 03af6b5996 gnu: r-quantmod: Update to 0.4.28.
add 1c8cf39127 gnu: r-quarto: Update to 1.5.1.
add 6faebf8596 gnu: r-fresh: Update to 0.2.2.
add e3946e7d1f gnu: r-cubature: Update to 2.1.4.
add d5257ae30e gnu: r-heatmaply: Update to 1.6.0.
add a0ca52285b gnu: r-roptim: Update to 0.1.7.
add 66da5fb258 gnu: r-baseline: Update to 1.3-7.
add 38dc34109c gnu: r-radiant-data: Update to 1.6.8.
add 61e294091a gnu: r-simdesign: Update to 2.21.
add e3ae6392c2 gnu: r-sitar: Update to 1.5.0.
add ec538306a6 gnu: r-vim: Update to 6.2.6.
add c8df11f199 gnu: r-dynutils: Update to 1.0.12.
add 4b3bbbdc95 gnu: r-adbcdrivermanager: Update to 0.20.0.
add 2e4c133def gnu: r-openxlsx: Update to 4.2.8.1.
add 57a3597427 gnu: r-maptree: Update to 1.4-9.
add afea3d95ac gnu: r-promises: Update to 1.5.0.
add cc0c9fd6ab gnu: r-flexparamcurve: Update to 1.5-7.
add 3c9722b29f gnu: r-dtplyr: Update to 1.3.2.
add 784418b560 gnu: r-rastervis: Update to 0.51.7.
add 730ca5a8bb gnu: r-rentrez: Update to 1.2.4.
add 8320e3cd65 gnu: r-renv: Update to 1.1.5.
add 29947e9a71 gnu: r-learnr: Update to 0.11.6.
add c37cff0bca gnu: r-here: Update to 1.0.2.
add 1db45cd146 gnu: r-reticulate: Update to 1.44.0.
add 9f1e17aa7f gnu: r-ggsci: Update to 4.1.0.
add b9691f0076 gnu: r-rstatix: Update to 0.7.3.
add bd35ce5d56 gnu: r-ggpubr: Update to 0.6.2.
add ae09fd5612 gnu: r-factominer: Update to 2.12.
add 50bd789490 gnu: r-pupillometryr: Update to 0.0.6.
add 8b2ee10653 gnu: r-rbibutils: Update to 2.4.
add c215b3f770 gnu: r-rbiom: Update to 2.2.1.
add 8745ff3f21 gnu: r-officer: Update to 0.7.0.
add 1ba74d8946 gnu: r-brglm: Update to 0.7.3.
add 63ba51cf48 gnu: r-acdm: Update to 1.1.0.
add 6b07d859ec gnu: r-insight: Update to 1.4.2.
add bffac25963 gnu: r-sjmisc: Update to 2.8.11.
add d9748a7b03 gnu: r-nodbi: Update to 0.13.1.
add ac238b86f3 gnu: r-argparse: Update to 2.3.1.
add 6de1cce177 gnu: r-deriv: Update to 4.2.0.
add 7ccbee75c2 gnu: r-doby: Update to 4.7.0.
add 75366a6e59 gnu: r-reformulas: Update to 0.4.2.
add 3915a6e9ea gnu: r-blavaan: Update to 0.5-9.
add 36c10e380e gnu: r-brglm2: Update to 1.0.0.
add fe98286d59 gnu: r-proc: Update to 1.19.0.1.
add 4a6547005a gnu: r-netrep: Update to 1.2.9.
add a2cc49796d gnu: r-abctools: Update to 1.1.8.
add eabcd7baaa gnu: r-ggnetwork: Update to 0.5.14.
add 6e78aa0a11 gnu: r-gam: Update to 1.22-6.
add 2ee1fe714e gnu: r-dofuture: Update to 1.1.2.
add af8ff91055 gnu: r-mosaiccore: Update to 0.9.5.
add 3d6aefe539 gnu: r-labelled: Update to 2.16.0.
add fdd9004149 gnu: r-mosaic: Update to 1.9.2.
add 230cc94bd8 gnu: r-svgui: Update to 1.0.2.
add 00e6017444 gnu: r-svdialogs: Update to 1.1.1.
add 4e421b30fb gnu: r-svunit: Update to 1.0.8.
add 1ecf27c369 gnu: r-accelmissing: Update to 2.2.
add de9de22b24 gnu: r-magick: Update to 2.9.0.
add e84d320741 gnu: r-geepack: Update to 1.3.13.
add 53b2752383 gnu: r-tarchetypes: Update to 0.13.2.
add bc12238844 gnu: r-targets: Update to 1.11.4.
add e673cd8eff gnu: r-quickjsr: Update to 1.8.1.
add a386bd3261 gnu: r-acceptancesampling: Update to 1.0.11.
add cf0c3d7162 gnu: r-th-data: Update to 1.1-4.
add 6a169c1324 gnu: r-multcomp: Update to 1.4-29.
add a0d2bcc4c3 gnu: r-emmeans: Update to 2.0.0.
add 8513ec2817 gnu: r-bayesplot: Update to 1.14.0.
add 301d61e9da gnu: r-tmb: Update to 1.9.18.
add 34a5c5dc0e gnu: r-sjstats: Update to 0.19.1.
add 76138aefbf gnu: r-bayestestr: Update to 0.17.0.
add f1e553a637 gnu: r-ggeffects: Update to 2.3.1.
add 255cc3a95c gnu: r-sjplot: Update to 2.9.0.
add 2be4feb20e gnu: r-credentials: Update to 2.0.3.
add 3a0a95de13 gnu: r-usethis: Update to 3.2.1.
add 0acf646fd8 gnu: r-weights: Update to 1.1.2.
add 727842514f gnu: r-biocmanager: Update to 1.30.26.
add a2a7f63274 gnu: r-rgl: Update to 1.3.24.
add 844dc50f84 gnu: r-multidplyr: Update to 0.1.4.
add da7403763a gnu: r-missforest: Update to 1.6.1.
add e2c929e3e5 gnu: r-circular: Update to 0.5-2.
add 47b163f4e3 gnu: r-admisc: Update to 0.39.
add 1dca5189c8 gnu: r-spamm: Update to 4.6.1.
add 9c17413f0b gnu: r-sparsesvd: Update to 0.2-3.
add 89104fa0fc gnu: r-spatialreg: Update to 1.4-2.
add 83630a0e1a gnu: r-qlcmatrix: Update to 0.9.9.
add e74b2a2b8d gnu: r-rnaturalearth: Update to 1.1.0.
add e01260d01b gnu: r-tractor-base: Update to 3.5.0.
add f63eafa6dd gnu: r-gridsvg: Update to 1.7-7.
add fd6e062744 gnu: r-pixmap: Update to 0.4-14.
add 9690aecaa0 gnu: r-rmpfr: Update to 1.1-2.
add 1897ea9aa3 gnu: r-fields: Update to 17.1.
add e34d04148f gnu: r-epi: Update to 2.61.
add f0e39fe2fb gnu: r-ppls: Update to 2.0.0.
add 763360a3cf gnu: r-listenv: Update to 0.10.0.
add 06882ad981 gnu: r-parallelly: Update to 1.45.1.
add 5bbe8b493e gnu: r-future: Update to 1.67.0.
add 1d0044c014 gnu: r-future-apply: Update to 1.20.0.
add 7da6e69945 gnu: r-future-callr: Update to 0.10.2.
add 6b8a5ce32f gnu: r-capushe: Update to 1.1.3.
add a23c188b1e gnu: r-blockmodeling: Update to 1.1.8.
add 6c2c4b853b gnu: r-bayesm: Update to 3.1-7.
add 2d07c4c5c5 gnu: r-tester: Update to 0.3.0.
add be0151783c gnu: r-compositions: Update to 2.0-9.
add e845774272 gnu: r-cobs: Update to 1.3-9-1.
add 09fa0675ae gnu: r-ggextra: Update to 0.11.0.
add c2b947434b gnu: r-ggpattern: Update to 1.2.1.
add 202e449c5a gnu: r-lavaan: Update to 0.6-20.
add d84083a2f1 gnu: r-penalized: Update to 0.9-53.
add ba25b18e32 gnu: r-irace: Update to 4.3.
add 7ac0423c4c gnu: r-apcluster: Update to 1.4.14.
add 8b1ee5f552 gnu: r-lemon: Update to 0.5.2.
add d2f6f34105 gnu: r-units: Update to 1.0-0.
add 62662b9440 gnu: r-clarabel: Update to 0.11.1.
add 1a2c532313 gnu: r-sf: Update to 1.0-22.
add e9c066b948 gnu: r-sftime: Update to 0.3.1.
add 3656b11786 gnu: r-spdep: Update to 1.4-1.
add 64eb3ef208 gnu: r-rms: Update to 8.1-0.
add eb6edf7d27 gnu: r-bookdown: Update to 0.45.
add a0be2e43e0 gnu: r-sampling: Update to 2.11.
add 871c1590d1 gnu: r-rttf2pt1: Update to 1.3.14.
add 567f83bcca gnu: r-extrafontdb: Update to 1.1.
add b8d146d333 gnu: r-extrafont: Update to 0.20.
add 424c95243d gnu: r-msigdbr: Update to 25.1.1.
add 34a70f6626 gnu: r-yulab-utils: Update to 0.2.1.
add dbe855c66f gnu: r-ggplotify: Update to 0.1.3.
add 6aa2396c33 gnu: r-urltools: Update to 1.7.3.1.
add 7bca7cbcf6 gnu: r-ggforce: Update to 0.5.0.
add fb83fa73ea gnu: r-eulerr: Update to 7.0.4.
add 70db6d3401 gnu: r-ggraph: Update to 2.2.2.
add 484d8c111a gnu: r-mlogit: Update to 1.1-3.
add a999215ca7 gnu: r-ggfun: Update to 0.2.0.
add 5239757a0f gnu: r-ggghost: Update to 0.2.3.
add a5b390c477 gnu: r-mapplots: Update to 1.5.3.
add 737d07ceb6 gnu: r-aplot: Update to 0.2.9.
add 3ecfdafa84 gnu: r-ggnewscale: Update to 0.5.2.
add bba933fa19 gnu: r-xml: Update to 3.99-0.20.
add 18d892f949 gnu: r-xml2: Update to 1.4.1.
add f305df067b gnu: r-dae: Update to 3.2.32.
add ac5ed93480 gnu: r-dalex: Update to 2.5.3.
add e9304482b6 gnu: r-enrichwith: Update to 0.4.0.
add 54ba82f825 gnu: r-plot3d: Update to 1.4.2.
add 5d96e68cbb gnu: r-plotroc: Update to 2.3.3.
add 64913496a2 gnu: r-ggfortify: Update to 0.4.19.
add 508df9cf77 gnu: r-uwot: Update to 0.2.4.
add 2aa6eb560d gnu: r-gldex: Update to 2.0.0.9.4.
add 60709b1115 gnu: r-patchwork: Update to 1.3.2.
add 35caf5aa61 gnu: r-harmony: Update to 1.2.4.
add 1af7b8857d gnu: r-covr: Update to 3.6.5.
add 89e4a35378 gnu: r-systemfonts: Update to 1.3.1.
add 96f12e2dfa gnu: r-terra: Update to 1.8-80.
add 95f5591b73 gnu: r-parameters: Update to 0.28.2.
add 82249dde2f gnu: r-pracma: Update to 2.4.6.
add 115f2bd9c0 gnu: r-acebayes: Update to 1.11.
add 3f0ff33591 gnu: r-gamlss-data: Update to 6.0-7.
add 910d9fd767 gnu: r-gamlss: Update to 5.5-0.
add b1175f1d08 gnu: r-seewave: Update to 2.2.4.
add a403fcce49 gnu: r-tree: Update to 1.0-45.
add 27571267b0 gnu: r-treeclust: Update to 1.1-7.1.
add df984f9bb5 gnu: r-gdina: Update to 2.9.12.
add cd23474a8b gnu: r-activpal: Update to 0.1.4.
add 42d83e281e gnu: r-expint: Update to 0.1-9.
add 34b7d17cf3 gnu: r-actuar: Update to 3.3-6.
add 4949a4d39f gnu: r-bmp: Update to 0.3.1.
add 6bdcf865ac gnu: r-imager: Update to 1.0.5.
add 1b892b09d9 gnu: r-adabag: Update to 5.1.
add a8ff16850a gnu: r-icge: Update to 0.4.3.
add 6b41602141 gnu: r-shapes: Update to 1.2.8.
add 8328667c35 gnu: r-shapviz: Update to 0.10.3.
add 792a415057 gnu: r-animation: Update to 2.8.
add d83993af0b gnu: r-anthropometry: Update to 1.20.
add 70ac7d0e61 gnu: r-anytime: Update to 0.3.12.
add 0f731f836a gnu: r-gghighlight: Update to 0.5.0.
add dee1bd1bee gnu: r-rsvg: Update to 2.7.0.
add 39cabfc280 gnu: r-forestplot: Update to 3.1.7.
add edc2b80590 gnu: r-quanteda: Update to 4.3.1.
add f5576d5e92 gnu: r-stm: Update to 1.3.8.
add a8d67300ff gnu: r-mi: Update to 1.2.
add de3606e5bc gnu: r-openmx: Update to 2.22.10.
add c120c5be07 gnu: r-bdgraph: Update to 2.74.
add f2ecbf1ecc gnu: r-butcher: Update to 0.3.6.
add 56480b8690 gnu: r-semplot: Update to 1.1.7.
add da0747c592 gnu: r-cdm: Update to 8.3-14.
add b1a5c601f0 gnu: r-tam: Update to 4.3-25.
add 3182274977 gnu: r-productplots: Update to 0.1.2.
add e0d4cf7d03 gnu: r-packrat: Update to 0.9.3.
add 8bd1e1b39e gnu: r-rsconnect: Update to 1.6.1.
add 50c70b81bf gnu: r-rstantools: Update to 2.5.0.
add 6a8f154373 gnu: r-rstanarm: Update to 2.32.2.
add 5fed62eab1 gnu: r-keyring: Update to 1.4.1.
add 809d612b3b gnu: r-rlinsolve: Update to 0.3.3.
add c92c3d2297 gnu: r-zvcv: Update to 2.1.3.
add f7598c3014 gnu: r-zseq: Update to 0.2.2.
add c8333cc4f4 gnu: r-dcurver: Update to 0.9.3.
add 5a3a889844 gnu: r-projpred: Update to 2.9.1.
add 4362ba0b35 gnu: r-brms: Update to 2.23.0.
add d63ab27112 gnu: r-scatterpie: Update to 0.2.6.
add 2faa7a29d4 gnu: r-boruta: Update to 9.0.0.
add b2a440e104 gnu: r-directlabels: Update to 2025.6.24.
add 1950fe816e gnu: r-phytools: Update to 2.5-2.
add 3430bd2507 gnu: r-hardhat: Update to 1.4.2.
add 1218e00019 gnu: r-mediation: Update to 4.5.1.
add 2409b273b5 gnu: r-tensor: Update to 1.5.1.
add c282985d1a gnu: r-spatstat-explore: Update to 3.5-3.
add b26bbaba91 gnu: r-spatstat-model: Update to 3.4-2.
add 4ab9d2462e gnu: r-spatstat-univar: Update to 3.1-4.
add 41ec7b1569 gnu: r-spatstat-utils: Update to 3.2-0.
add 0165064d98 gnu: r-spatstat-data: Update to 3.1-9.
add 87308f95c6 gnu: r-spatstat-geom: Update to 3.6-0.
add a0d1407902 gnu: r-spatstat-linnet: Update to 3.3-2.
add 410e93dd41 gnu: r-spatstat-random: Update to 3.4-2.
add 7896ee84ee gnu: r-spatstat: Update to 3.4-1.
add d86dd26a1a gnu: r-rfast: Update to 2.1.5.2.
add 4648fa961f gnu: r-clusterr: Update to 1.3.5.
add 91ffcfc5c3 gnu: r-nada: Update to 1.6-1.2.
add 897cfab7fe gnu: r-nanoarrow: Update to 0.7.0-1.
add 9ebd3ebd51 gnu: r-survminer: Update to 0.5.1.
add 670c745c50 gnu: r-igraph: Update to 2.2.1.
add 844939d609 gnu: r-rsample: Update to 1.3.1.
add 6c69162e8a gnu: r-dicekriging: Update to 1.6.1.
add 2c48a875d7 gnu: r-dials: Update to 1.4.2.
add af8103e6d3 gnu: r-tune: Update to 2.0.1.
add 46e5614807 gnu: r-tidyposterior: Update to 1.0.2.
add 7f1dfd9cdf gnu: r-tidytext: Update to 0.4.3.
add 499ed33aab gnu: r-parsnip: Update to 1.3.3.
add a29646ef9d gnu: r-infer: Update to 1.0.9.
add 53de76c690 gnu: r-modeldata: Update to 1.5.1.
add 61a5876a45 gnu: r-tidymodels: Update to 1.4.1.
add 59cedeaac8 gnu: r-altmeta: Update to 4.3.
add a66d8c71c2 gnu: r-seuratobject: Update to 5.2.0.
add f72be247ed gnu: r-seurat: Update to 5.3.1.
add 58306f5633 gnu: r-calculus: Update to 1.1.0.
add 83b6da8765 gnu: r-aws-s3: Update to 0.3.22.
add defedd73d9 gnu: r-lgr: Update to 0.5.0.
add 32ef08621a gnu: r-mlr3filters: Update to 0.9.0.
add c2f81b770f gnu: r-mlr3fselect: Update to 1.4.0.
add e3d672d894 gnu: r-mlr3hyperband: Update to 1.0.0.
add bc48c9b259 gnu: r-mlr3inferr: Update to 0.2.0.
add 2a89db4205 gnu: r-mlr3mbo: Update to 0.3.3.
add fa83ee1e51 gnu: r-mlr3measures: Update to 1.1.0.
add 42772f4f6e gnu: r-mlr3misc: Update to 0.19.0.
add af82f4e4a8 gnu: r-mlr3: Update to 1.2.0.
add 3f9e933ed1 gnu: r-mlr3learners: Update to 0.13.0.
add 4a1b455239 gnu: r-bbotk: Update to 1.8.0.
add 3452358c14 gnu: r-mlr3tuning: Update to 1.5.0.
add da4c40e741 gnu: r-highs: Update to 1.10.0-3.
add 726e680d6a gnu: r-textshaping: Update to 1.0.4.
add bf4c3d8da4 gnu: r-ragg: Update to 1.5.0.
add e27e4029c0 gnu: r-qpdf: Update to 1.4.1.
add 17e2b45e6d gnu: r-pbdmpi: Update to 0.5-4.
add accf5eefa4 gnu: r-pdftools: Update to 3.6.0.
add c00ea654b7 gnu: r-readtext: Update to 0.92.1.
add 2f91a91280 gnu: r-stars: Update to 0.6-8.
add 06766968d5 gnu: r-tmaptools: Update to 3.3.
add fd78c7a820 gnu: r-delaporte: Update to 8.4.2.
add a82ec712d1 gnu: r-qpcr: Update to 1.4-2.
add 31a3752531 gnu: r-gganimate: Update to 1.0.11.
add 40111390bc gnu: r-tfruns: Update to 1.5.4.
add 478ed9e5d4 gnu: r-paws-common: Update to 0.8.5.
add 76074f4060 gnu: r-wordspace: Update to 0.2-9.
add f07a146693 gnu: r-mockery: Update to 0.4.5.
add cb6c0b642f gnu: r-zoib: Update to 1.6.1.
add 2e05a655df gnu: r-gstat: Update to 2.1-4.
add 25bfc60c38 gnu: r-automap: Update to 1.1-20.
add f12f7053db gnu: r-rcpparmadillo: Update to 15.0.2-2.
add e6a5be0b83 gnu: r-rsqlite: Update to 2.4.4.
add 867cfdcd97 gnu: r-runit: Update to 0.4.33.1.
add 6945e681e4 gnu: r-statmod: Update to 1.5.1.
add dd72b03a53 gnu: r-trimcluster: Update to 0.2-0.
add 098b7b9e66 gnu: r-tclust: Update to 2.1-2.
add a0ac846ac9 gnu: r-simr: Update to 1.0.8.
add 78959c736e gnu: r-collapse: Update to 2.1.5.
add 67c20d04ee gnu: r-digest: Update to 0.6.39.
add b3607573c0 gnu: r-quarto: Remove r-ggplot2.
add 53cc31eefa gnu: r-ggplot2: Update to 4.0.1.
add 141733af71 gnu: r-plotrix: Update to 3.8-13.
add 33354cb815 gnu: r-marginaleffects: Update to 0.31.0.
add 76f1c90ec5 gnu: r-httptest: Update to 4.2.3.
add f3da11c331 gnu: r-httptest2: Update to 1.2.2.
add 9101c7b28f gnu: r-gss: Update to 2.2-10.
add 7a6fcd9312 gnu: r-tinytex: Update to 0.58.
add 2c9189a3e3 gnu: r-s7: Update to 0.2.1.
add 2e26653abf gnu: r-adbcdrivermanager: Update to 0.21.0.
add 5cdc2ce2b7 gnu: r-reticulate: Update to 1.44.1.
add 21c4bf1428 gnu: r-fansi: Update to 1.0.7.
add 011b4f5046 gnu: r-officer: Update to 0.7.1.
add 98befda987 gnu: r-th-data: Update to 1.1-5.
add 3e2aa9a827 gnu: r-gert: Update to 2.2.0.
add f3f7186a35 gnu: r-biocmanager: Update to 1.30.27.
add dcfb30ad9a gnu: r-rgl: Update to 1.3.31.
add 7fb6d6c65e gnu: r-future: Update to 1.68.0.
add ab5fa5d9e8 gnu: r-xkcd: Update to 0.1.0.
add 73d1898d69 gnu: r-ggpointdensity: Update to 0.2.1.
add 86b67fee09 gnu: r-xml2: Update to 1.5.0.
add 3b652c53fd gnu: r-rsconnect: Update to 1.6.2.
add abe7e2d34a gnu: r-bridgesampling: Update to 1.2-1.
add 8a9b10754d gnu: r-spatstat-univar: Update to 3.1-5.
add b72bc202a5 gnu: r-spatstat-geom: Update to 3.6-1.
add a7c3a9cba8 gnu: r-lobstr: Update to 1.1.3.
add c2abe13b8f gnu: r-warp: Update to 0.2.2.
add bf3b1a041e gnu: r-slider: Update to 0.3.3.
add 36fba42be4 gnu: r-qtl: Update to 1.72.
add 3532391ccc gnu: r-locpol: Update to 0.9.0.
add b9351be9d9 gnu: r-mlr3cluster: Update to 0.1.12.
add 93ef3bbcb8 gnu: r-downlit: Update to 0.4.5.
add e8224f3e81 gnu: r-paws-common: Update to 0.8.6.
add 98059912dd gnu: r-duckdb: Update to 1.4.2.
add 3b5f808fea gnu: r-readr: Update to 2.1.6.
add fe8a55c0f1 gnu: r-rttf2pt1: Add test inputs.
add e8609b3805 gnu: r-extrafontdb: Add test input.
add 8b7a0cdc98 gnu: r-extrafont: Add test input.
add 1a97739bda guix: Update Bioconductor version to 3.22.
add f54b8586a6 gnu: Add r-seqinfo.
add 6e98baa91e gnu: Add r-convert.
add c5eaf0b436 gnu: Add r-cigarillo.
add 0f37a94753 gnu: Add r-gcptools.
add a1c55d15cd gnu: Add r-immapex.
add 2462a41ccf gnu: Add r-sched.
add 9b6c64c588 gnu: Add r-sqlq.
add cf33494417 gnu: Add r-fscache.
add 918295ec6b gnu: r-tximport: Update to 1.36.1.
add 4c641636e8 gnu: r-biocpkgtools: Update to 1.26.4.
add 6ffc51ff08 gnu: r-s4arrays: Update to 1.8.1.
add f9e94993b8 gnu: r-biocparallel: Update to 1.44.0.
add 4bf3222c93 gnu: r-biomart: Update to 2.66.0.
add b42f0e2573 gnu: r-escape: Update to 2.6.1.
add eada4baa6e gnu: r-annotationhub: Update to 4.0.0.
add 9ddc679a91 gnu: r-biobase: Update to 2.70.0.
add 4c6951ac69 gnu: r-bamsignals: Update to 1.42.0.
add b2dbef37a7 gnu: r-vcr: Skip one more test.
add e1d7c5b864 gnu: r-mscoreutils: Update to 1.21.0.
add c997dff72e gnu: r-baseline: Add missing inputs.
add d86f96e8f3 gnu: r-phyloseq: Update to 1.54.0.
add 308d3daee7 gnu: r-biomformat: Update to 1.38.0.
add 975b968758 gnu: r-metabocoreutils: Update to 1.18.0.
add ad8ce75a78 gnu: r-genomicfeatures: Update to 1.62.0.
add 26b9eb3bf3 gnu: python-jupyter-client-bootstrap: Fix kernelspec script.
add 92095b1a64 gnu: r-mutationalpatterns: Update to 3.19.1.
add 947b8f2889 gnu: r-singler: Update to 2.12.0.
add 1a27b4afb1 gnu: r-scrapper: Update to 1.4.0.
add 0676ec17d1 gnu: r-visnetwork: Fix hash.
add 87127d40e3 gnu: r-greylistchip: Update to 1.42.0.
add 608067ada7 gnu: r-flames: Update to 2.4.1.
add a5eb69894f gnu: r-chemminer: Update to 3.62.0.
add 43cc8cc3bc gnu: r-diffbind: Update to 3.20.0.
add 3ba8560571 gnu: r-barcodetrackr: Disable some tests.
add 0b5b899cad gnu: r-birewire: Update to 3.41.0.
add bc29688d28 gnu: r-bsseq: Update to 1.46.0.
add f5d99d4f68 gnu: r-basilisk-utils: Update to 1.22.0.
add de94260518 gnu: r-transcriptr: Update to 1.37.0.
add 73995d797d gnu: r-ballgown: Update to 2.42.0.
add 9ad27981dc gnu: r-organism-dplyr: Update to 1.37.1.
add 7f5f0f95e3 gnu: r-org-eck12-eg-db: Update to 3.22.0.
add 8149efbbfe gnu: r-org-bt-eg-db: Update to 3.22.0.
add 258ee7c76a gnu: r-org-sc-sgd-db: Update to 3.22.0.
add d7c074931e gnu: r-reactome-db: Update to 1.94.0.
add dddad93263 gnu: r-genomeinfodbdata: Update to 1.2.15.
add 71dac9e05f gnu: r-go-db: Update to 3.22.0.
add 60a5d4c8da gnu: r-org-ce-eg-db: Update to 3.22.0.
add 1b4ba32d13 gnu: r-org-dm-eg-db: Update to 3.22.0.
add e7d3f43044 gnu: r-org-dr-eg-db: Update to 3.22.0.
add fbc9871158 gnu: r-org-hs-eg-db: Update to 3.22.0.
add d5d2452cab gnu: r-org-mm-eg-db: Update to 3.22.0.
add 69b3ea3b70 gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Update to 3.22.1.
add d42a3605cd gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Update to 3.22.0.
add 0c0bfec748 gnu: r-pfam-db: Update to 3.22.0.
add 30b4bae894 gnu: r-adductdata: Update to 1.26.0.
add 0688f366a9 gnu: r-airway: Update to 1.30.0.
add 043362e646 gnu: r-aneufinderdata: Update to 1.38.0.
add 5d7243aca5 gnu: r-arrmdata: Update to 1.46.0.
add 3114e72bc4 gnu: r-bcellviper: Update to 1.46.0.
add ee8057095f gnu: r-biotmledata: Update to 1.34.0.
add c832dd8822 gnu: r-bladderbatch: Update to 1.48.0.
add d88644a366 gnu: r-bodymaprat: Update to 1.26.0.
add 868aafe74c gnu: r-biscuiteerdata: Update to 1.24.0.
add 245343f7f7 gnu: r-breakpointrdata: Update to 1.28.0.
add 47a4a8200c gnu: r-breastcancervdx: Update to 1.48.0.
add 7ba2cea3a1 gnu: r-celldex: Update to 1.20.0.
add 1c2d4ed788 gnu: r-champdata: Update to 2.42.0.
add 76e7c5a0b3 gnu: r-chipexoqualexample: Update to 1.34.0.
add 8ef0774747 gnu: r-chromstardata: Update to 1.36.0.
add d171ef9055 gnu: r-copyhelper: Update to 1.42.0.
add ff6f23d611 gnu: r-derfinderdata: Update to 2.28.0.
add 03d196abdb gnu: r-faahko: Update to 1.50.0.
add 750bbcb1e0 gnu: r-flowsorted-blood-450k: Update to 1.48.0.
add b7fa1f8617 gnu: r-flowsorted-blood-epic: Update to 2.14.0.
add 9ec7aed88a gnu: r-flowworkspacedata: Update to 3.22.0.
add 7e990e77e3 gnu: r-genelendatabase: Update to 1.46.0.
add ec56f3fd98 gnu: r-genomationdata: Update to 1.42.0.
add c4c274a17b gnu: r-golubesets: Update to 1.52.0.
add a5e8bd8bb0 gnu: r-gsvadata: Update to 1.46.0.
add 970722bd7e gnu: r-hellorangesdata: Update to 1.36.0.
add 749da2c3d9 gnu: r-hdcytodata: Update to 1.30.0.
add bda21345c1 gnu: r-illumina450probevariants-db: Update to 1.46.0.
add 24f4092a30 gnu: r-illuminadatatestfiles: Update to 1.48.0.
add 425eb3c44b gnu: r-italicsdata: Update to 2.48.0.
add 34ea1cee15 gnu: r-jaspar2016: Update to 1.38.0.
add 7799bbb00b gnu: r-leukemiaseset: Update to 1.46.0.
add 5493fca295 gnu: r-lungcancerlines: Update to 0.48.0.
add 30b0603042 gnu: r-macrophage: Update to 1.26.0.
add 25ae1d7afb gnu: r-methylaiddata: Update to 1.42.0.
add 91907d506d gnu: r-methylclockdata: Update to 1.18.0.
add 89a68a1ff9 gnu: r-mousegastrulationdata: Update to 1.24.0.
add 0dcaf9e952 gnu: r-minfidata: Update to 0.56.0.
add 07c84c3378 gnu: r-minfidataepic: Update to 1.36.0.
add f5c3ffffe4 gnu: r-minionsummarydata: Update to 1.40.0.
add 6b5c6c3c98 gnu: r-msdata: Update to 0.50.0.
add b21a031f2c gnu: r-msigdb: Update to 1.18.0.
add 4d9e30ff36 gnu: r-pasilla: Update to 1.38.0.
add 23f021ca66 gnu: r-pasillabamsubset: Update to 0.48.0.
add a48a7e18d4 gnu: r-prolocdata: Update to 1.48.0.
add 12ea7957f0 gnu: r-hsmmsinglecell: Update to 1.30.0.
add 2c8f9e2849 gnu: r-all: Update to 1.52.0.
add ceabf1c6c3 gnu: r-affydata: Update to 1.58.0.
add b6fe1946e1 gnu: r-gagedata: Update to 2.48.0.
add 855ab07ccf gnu: r-curatedtcgadata: Update to 1.32.1.
add 6eac374687 gnu: r-rcistarget-hg19-motifdbs-cisbponly-500bp: Update to
1.30.0.
add 1a164623d3 gnu: r-rnaseqdata-hnrnpc-bam-chr14: Update to 0.48.0.
add 3bd16e2ab4 gnu: r-rnbeads-hg19: Update to 1.42.0.
add cda5a8293a gnu: r-rtcga-rnaseq: Update to 20151101.40.0.
add 759af55807 gnu: r-sesamedata: Update to 1.28.0.
add 4cfda4b394 gnu: r-systempiperdata: Update to 2.14.0.
add 6471c2a5c0 gnu: r-tcgabiolinksgui-data: Update to 1.30.0.
add b03727521a gnu: r-tximportdata: Update to 1.38.0.
add c8da499512 gnu: r-zebrafishrnaseq: Update to 1.30.0.
add 86dde2c8f8 gnu: r-abarray: Update to 1.78.0.
add 2474d8e9c5 gnu: r-absseq: Update to 1.64.0.
add ccf68f1205 gnu: r-adacgh2: Update to 2.50.0.
add 757608b91e gnu: r-adam: Update to 1.26.0.
add f0542eb692 gnu: r-adamgui: Update to 1.26.0.
add 71cbd3cc10 gnu: r-adimpute: Update to 1.20.0.
add 8c53d1acea gnu: r-adsplit: Update to 1.80.0.
add 0da1ae458f gnu: r-affixcan: Update to 1.28.0.
add f102cdf51a gnu: r-affyilm: Update to 1.62.0.
add d1348e0450 gnu: r-affylmgui: Update to 1.84.0.
add ff8104361b gnu: r-affyplm: Update to 1.86.0.
add 214a871032 gnu: r-affyrnadegradation: Update to 1.56.0.
add 845cd2216b gnu: r-agdex: Update to 1.58.0.
add 77af9ea22c gnu: r-aggregatebiovar: Update to 1.20.0.
add 9fa2faa785 gnu: r-agilp: Update to 3.42.0.
add 04f9a4a8fc gnu: r-adductomicsr: Update to 1.26.0.
add ee94ef2b04 gnu: r-agimicrorna: Update to 2.60.0.
add f4f047e5e8 gnu: r-aims: Update to 1.42.0.
add c261ad03fb gnu: r-airpart: Update to 1.18.0.
add e5c489593d gnu: r-alabaster-base: Update to 1.10.0.
add 0a0def4df6 gnu: r-alabaster-matrix: Update to 1.10.0.
add 75e08bc2fc gnu: r-alabaster-ranges: Update to 1.10.0.
add 8421e9b8be gnu: r-alabaster-sce: Update to 1.10.0.
add 2017ef7395 gnu: r-alabaster-schemas: Update to 1.10.0.
add 03a3709a9f gnu: r-alabaster-se: Update to 1.10.0.
add fe132d6c11 gnu: r-amountain: Update to 1.36.0.
add 5ea158a7c6 gnu: r-amplican: Update to 1.32.1.
add 770854ad6c gnu: r-amaretto: Update to 1.26.0.
add d0e6fa2e10 gnu: r-anaquin: Update to 2.34.0.
add 3658c5c1fc gnu: r-ancombc: Update to 2.12.0.
add eb701f4e9b gnu: r-animalcules: Update to 1.26.0.
add c02b3d8aa5 gnu: r-annotationhubdata: Update to 1.40.0.
add 828c764431 gnu: r-anvil: Update to 1.22.0.
add 4858be4ae3 gnu: r-anvilbase: Update to 1.4.0.
add dcdedc6a3d gnu: r-anvilgcp: Update to 1.4.1.
add f693c808b8 gnu: r-aldex2: Update to 1.42.0.
add ef30828218 gnu: r-alevinqc: Update to 1.26.0.
add 0b31200dd1 gnu: r-alphabeta: Update to 1.24.0.
add 1a7e6d3ab1 gnu: r-alpsnmr: Update to 4.12.0.
add 4111b220d8 gnu: r-altcdfenvs: Update to 2.72.0.
add 31c3f273dd gnu: r-anf: Update to 1.32.0.
add fe4a10a25f gnu: r-annmap: Update to 1.52.0.
add b7a3c2c3b9 gnu: r-antiprofiles: Update to 1.50.0.
add 4b86e16487 gnu: r-arrayexpress: Update to 1.70.0.
add 9864ec6823 gnu: r-arraymvout: Update to 1.68.0.
add 0367f65aa0 gnu: r-arrayquality: Update to 1.88.0.
add 13b37c0155 gnu: r-asafe: Update to 1.36.0.
add c58253b193 gnu: r-aseb: Update to 1.54.0.
add a3850f133f gnu: r-asgsca: Update to 1.44.0.
add 75d6b06eab gnu: r-asics: Update to 2.26.0.
add 25b7fbda7f gnu: r-aspli: Update to 2.20.0.
add 33c053d69c gnu: r-assessorf: Update to 1.28.0.
add ff3754a066 gnu: r-asset: Update to 2.28.0.
add e14cb43c03 gnu: r-assorthead: Update to 1.4.0.
add c7901887f3 gnu: r-atena: Update to 1.16.0.
add 25d1f06164 gnu: r-atsnp: Update to 1.26.0.
add a654875bef gnu: r-attract: Update to 1.62.0.
add d6fe7685cd gnu: r-awfisher: Update to 1.24.0.
add 78392537a4 gnu: r-awst: Update to 1.18.0.
add d6341c44da gnu: r-baalchip: Update to 1.36.0.
add bcaea13d04 gnu: r-bags: Update to 2.50.0.
add f5594f39e2 gnu: r-basespacer: Update to 1.54.0.
add 17e7db61df gnu: r-bader: Update to 1.48.0.
add 743cdade25 gnu: r-badregionfinder: Update to 1.38.0.
add d8a009374e gnu: r-bambu: Update to 3.12.0.
add 397d8258ae gnu: r-bandits: Update to 1.26.0.
add 5dbeea5795 gnu: r-banocc: Update to 1.34.0.
add 0147404bb7 gnu: r-biocmake: Update to 1.2.0.
add 6519bec081 gnu: r-biocversion: Update to 3.22.0.
add 1ac0a63aaf gnu: r-biocgenerics: Update to 0.56.0.
add 421d310bef gnu: r-breakpointr: Update to 1.28.0.
add 25d5411be5 gnu: r-cardelino: Update to 1.12.0.
add 329c2da147 gnu: r-ccfindr: Update to 1.30.0.
add e361848cbb gnu: r-cellid: Update to 1.18.0.
add 1e78da8c1c gnu: r-chihaya: Update to 1.10.0.
add 921fb5e256 gnu: r-coregx: Update to 2.14.0.
add 17c6f9e672 gnu: r-coverageview: Update to 1.48.0.
add a36509a178 gnu: r-csaw: Update to 1.44.0.
add f613602a29 gnu: r-dama: Update to 1.82.0.
add e7ac089273 gnu: r-damefinder: Update to 1.22.0.
add 6c07edb9ea gnu: r-dearseq: Update to 1.22.0.
add a8e55857d8 gnu: r-decipher: Update to 3.6.0.
add cf22aaaab0 gnu: r-decomptumor2sig: Update to 2.26.0.
add d92233f2a8 gnu: r-decontam: Update to 1.30.0.
add f846737f66 gnu: r-deconvr: Update to 1.16.0.
add 702bda7817 gnu: r-decoupler: Update to 2.16.0.
add f376a758d8 gnu: r-deepsnv: Update to 1.56.0.
add 27c96b602b gnu: r-degreport: Update to 1.46.0.
add 796c99aa4f gnu: r-delayedarray: Update to 0.36.0.
add 253db045cb gnu: r-densvis: Update to 1.20.1.
add 99e4cc308b gnu: r-derfinder: Update to 1.44.0.
add 1031f3f78f gnu: r-derfinderhelper: Update to 1.44.0.
add e73d1c1929 gnu: r-dmrcate: Update to 3.6.0.
add b21d603b5c gnu: r-drimseq: Update to 1.38.0.
add 77b5f47c66 gnu: r-dropletutils: Update to 1.30.0.
add 12783fe41b gnu: r-dss: Update to 2.58.0.
add d3bb1d16eb gnu: r-dyndoc: Update to 1.88.0.
add 5178d1b86f gnu: r-bluster: Update to 1.20.0.
add a7270f28d5 gnu: r-ideoviz: Update to 1.46.0.
add dafacf44bd gnu: r-infercnv: Update to 1.26.0.
add 2c5607c00a gnu: r-iranges: Update to 2.44.0.
add de160465e8 gnu: r-isoformswitchanalyzer: Update to 2.10.0.
add ebda98a6d7 gnu: r-italics: Update to 2.70.0.
add 9f627ea90f gnu: r-nebulosa: Update to 1.20.0.
add 42ca6d1a82 gnu: r-affy: Update to 1.88.0.
add 4a9161a50d gnu: r-affycomp: Update to 1.86.0.
add fc5320ce92 gnu: r-affycontam: Update to 1.68.0.
add fb15b262ea gnu: r-affycoretools: Update to 1.82.0.
add c7c65bfb48 gnu: r-affyio: Update to 1.80.0.
add d8ffb7e692 gnu: r-affxparser: Update to 1.82.0.
add 5aeff684d3 gnu: r-annotate: Update to 1.88.0.
add e39baabb1b gnu: r-annotationdbi: Update to 1.72.0.
add 0ba095db1f gnu: r-annotationfilter: Update to 1.34.0.
add 1b085f7f32 gnu: r-annotationforge: Update to 1.52.0.
add f441ae0aeb gnu: r-aroma-light: Update to 3.40.0.
add b32e604448 gnu: r-biostrings: Update to 2.78.0.
add 37d303ec2d gnu: r-biovizbase: Update to 1.58.0.
add c5969c5efa gnu: r-bsgenome: Update to 1.78.0.
add 96215cd0c1 gnu: r-category: Update to 2.76.0.
add cbdd81bd7a gnu: r-champ: Update to 2.40.0.
add 51fabbda56 gnu: r-chipseeker: Update to 1.46.1.
add cc1e429a69 gnu: r-chipseq: Update to 1.60.0.
add 9f035a6a1e gnu: r-complexheatmap: Update to 2.26.0.
add 5fd41632f3 gnu: r-deseq2: Update to 1.50.2.
add 41a230b13a gnu: r-dexseq: Update to 1.56.0.
add 29026f50d6 gnu: r-diffcyt: Update to 1.30.0.
add fb901c0f0e gnu: r-dirichletmultinomial: Update to 1.52.0.
add 24ae91e612 gnu: r-dittoseq: Update to 1.22.0.
add 1a46eb8dda gnu: r-edaseq: Update to 2.44.0.
add 4ac77c9c01 gnu: r-edger: Update to 4.8.0.
add 8774e36ee5 gnu: r-enmix: Update to 1.46.0.
add 4c7c661dec gnu: r-ensembldb: Update to 2.34.0.
add 0dce5102a5 gnu: r-epidish: Update to 2.26.0.
add 6caf3b433c gnu: r-fastseg: Update to 1.56.0.
add 61e289a2fd gnu: r-gage: Update to 2.60.0.
add ebd25d3892 gnu: r-genefilter: Update to 1.92.0.
add f292cae5cc gnu: r-geneoverlap: Update to 1.46.0.
add c8df59b932 gnu: r-genomation: Update to 1.42.0.
add 9d78edcab4 gnu: r-genomeinfodb: Update to 1.46.0.
add f062fd8147 gnu: r-genomicalignments: Update to 1.46.0.
add 72730b9c44 gnu: r-genomicdatacommons: Update to 1.34.1.
add 6d02a1d27a gnu: r-genomicfiles: Update to 1.46.0.
add 0c93ac0e23 gnu: r-genomicranges: Update to 1.62.0.
add 4e612b7b4b gnu: r-glad: Update to 2.74.0.
add c56f8719f5 gnu: r-globalancova: Update to 4.28.0.
add 172ccd9871 gnu: r-globaltest: Update to 5.64.0.
add abfaadda07 gnu: r-gostats: Update to 2.76.0.
add 5b07f31b27 gnu: r-gseabase: Update to 1.72.0.
add a4b41b600d gnu: r-gsva: Update to 2.4.1.
add 4591c2517c gnu: r-gypsum: Update to 1.6.0.
add c4b1b24539 gnu: r-hpar: Update to 1.52.0.
add f5de907a5e gnu: r-r3cseq: Update to 1.56.0.
add 5219039954 gnu: r-r4rna: Update to 1.38.0.
add 45e3d3851a gnu: r-radiogx: Update to 2.14.0.
add d317a62304 gnu: r-raggedexperiment: Update to 1.34.0.
add 1e14b3a50b gnu: r-rdisop: Update to 1.70.0.
add 0b92c10e0e gnu: r-rhtslib: Update to 3.6.0.
add 4cac362704 gnu: r-rnbeads: Update to 2.28.0.
add 3d61db38d9 gnu: r-rpx: Update to 2.18.0.
add 1c12bf2fdd gnu: r-impute: Update to 1.84.0.
add 5706447768 gnu: r-interactivedisplay: Update to 1.48.0.
add 606f0c17df gnu: r-interactivedisplaybase: Update to 1.48.0.
add ff4e8012e8 gnu: r-keggrest: Update to 1.50.0.
add 104fd49b1d gnu: r-lea: Update to 3.22.0.
add 9e4137a616 gnu: r-lfa: Update to 2.10.0.
add 916af93a71 gnu: r-limma: Update to 3.66.0.
add 44832d77ec gnu: r-made4: Update to 1.84.0.
add 2a82117359 gnu: r-makecdfenv: Update to 1.86.0.
add a27378d66c gnu: r-manor: Update to 1.82.0.
add b5bcbfad30 gnu: r-maser: Update to 1.28.0.
add 1f38bc289c gnu: r-mdqc: Update to 1.72.0.
add 813dc4cc3e gnu: r-metagenomeseq: Update to 1.52.0.
add 5d27013bcb gnu: r-metaneighbor: Update to 1.29.0.
add 3dd4e151f8 gnu: r-methylaid: Update to 1.44.0.
add 0c0ff6b31e gnu: r-methylkit: Update to 1.36.0.
add 7264a72513 gnu: r-mfuzz: Update to 2.70.0.
add 455323ddfc gnu: r-modstrings: Update to 1.26.0.
add 98271d38a3 gnu: r-mosdef: Update to 1.6.0.
add 5ea869dae8 gnu: r-muscat: Update to 1.24.0.
add 854d78ca96 gnu: r-msa: Update to 1.42.0.
add 367c4d88d8 gnu: r-msbackendsql: Update to 1.10.1.
add 3c270b45a6 gnu: r-msexperiment: Update to 1.12.0.
add ad47423289 gnu: r-msnbase: Update to 2.36.0.
add 964796a435 gnu: r-msnid: Update to 1.44.0.
add ad3fa5a05e gnu: r-mzid: Update to 1.48.0.
add 1dd79352a9 gnu: r-mzr: Update to 2.44.0.
add f1395aca7c gnu: r-organismdbi: Update to 1.52.0.
add 50ba3d01af gnu: r-oscope: Update to 1.40.0.
add 6a065aa90e gnu: r-pcaexplorer: Update to 3.4.0.
add f5cad04823 gnu: r-pcamethods: Update to 2.2.0.
add 5066922154 gnu: r-pfamanalyzer: Update to 1.10.0.
add c6590985f6 gnu: r-piano: Update to 2.26.0.
add 79d08cf6cc gnu: r-powertcr: Update to 1.30.0.
add b7ec2ae73c gnu: r-psmatch: Update to 1.14.0.
add e3ed0a7a20 gnu: r-protgear: Update to 1.14.0.
add b2683a0f7c gnu: r-protgenerics: Update to 1.42.0.
add 4d4fdec1ef gnu: r-pwalign: Update to 1.6.0.
add c69a4c2394 gnu: r-rbgl: Update to 1.86.0.
add 8dc787c6bf gnu: r-rcas: Update to 1.36.0.
add f6e90e9a0b gnu: r-rcy3: Update to 2.30.0.
add 85fd8da554 gnu: r-recount: Update to 1.36.0.
add 80fc2de28d gnu: r-regioner: Update to 1.42.0.
add bcf05e59fb gnu: r-reportingtools: Update to 2.50.0.
add 5c85bb3cd1 gnu: r-rhdf5: Update to 2.54.0.
add 8b11833083 gnu: r-rhdf5filters: Update to 1.22.0.
add 90e19f5350 gnu: r-rnaagecalc: Update to 1.22.0.
add 74997bd526 gnu: r-rsamtools: Update to 2.26.0.
add 43d517933b gnu: r-rtcga: Update to 1.40.0.
add 8da0f275ae gnu: r-rtcgatoolbox: Update to 2.40.0.
add 114d9f1ddc gnu: r-rtracklayer: Update to 1.70.0.
add 3c6a701fd9 gnu: r-saturn: Update to 1.18.0.
add 823dab4d56 gnu: r-scannotatr: Update to 1.16.0.
add eb8cbfa30e gnu: r-scdblfinder: Update to 1.24.0.
add d88c8d9148 gnu: r-scmap: Update to 1.32.0.
add c066175fd6 gnu: r-screpertoire: Update to 2.5.8.
add ecfad3935c gnu: r-scrnaseq: Update to 2.24.0.
add 1c47451163 gnu: r-scry: Update to 1.22.0.
add 6ef205c3b9 gnu: r-seqarray: Update to 1.50.0.
add 3229b19856 gnu: r-seqlogo: Update to 1.76.0.
add 44b8a84a6e gnu: r-seqpattern: Update to 1.42.0.
add a386b4e5b7 gnu: r-sesame: Update to 1.28.0.
add 510761a0e4 gnu: r-shinymethyl: Update to 1.46.0.
add 77b8e1a182 gnu: r-shortread: Update to 1.68.0.
add 5649119263 gnu: r-sictools: Update to 1.40.0.
add 12cc15c883 gnu: r-simona: Update to 1.8.0.
add 46dfa55cea gnu: r-simplifyenrichment: Update to 2.4.0.
add 0fddafde4d gnu: r-singscore: Update to 1.30.0.
add f3c28f8165 gnu: r-tcgautils: Update to 1.29.5.
add 63e633a419 gnu: r-tkwidgets: Update to 1.88.0.
add 159982c45b gnu: r-toast: Update to 1.24.0.
add e0fd2113ae gnu: r-trackviewer: Update to 1.46.0.
add df5e2e61f5 gnu: r-trajectoryutils: Update to 1.18.0.
add 82787ef390 gnu: r-trna: Update to 1.28.0.
add c461566734 gnu: r-trnadbimport: Update to 1.28.0.
add 5dc9d6ac36 gnu: r-scds: Update to 1.26.0.
add c5f3b0ed15 gnu: r-slingshot: Update to 2.18.0.
add 855bda6b66 gnu: r-spectra: Update to 1.20.0.
add 7961223126 gnu: r-stager: Update to 1.32.0.
add bbda45f3f9 gnu: r-stringdb: Update to 2.22.0.
add e4b376d81c gnu: r-structstrings: Update to 1.26.0.
add d2b9cf3d56 gnu: r-structuralvariantannotation: Update to 1.26.0.
add ebc35e47e9 gnu: r-summarizedexperiment: Update to 1.40.0.
add 9f4377fe4e gnu: r-survcomp: Update to 1.60.0.
add f0758c60cb gnu: r-sva: Update to 3.58.0.
add e4ace9a1ee gnu: r-systempiper: Update to 2.16.0.
add 69167a3a26 gnu: r-topgo: Update to 2.62.0.
add 340c52678f gnu: r-txdbmaker: Update to 1.6.0.
add 0cd32ffe14 gnu: r-tximport: Update to 1.38.1.
add 6a7e94e75e gnu: r-variantannotation: Update to 1.56.0.
add e7ab2cc4bf gnu: r-vsn: Update to 3.78.0.
add 15e079259c gnu: r-xina: Update to 1.28.0.
add 75426d57c7 gnu: r-xmapbridge: Update to 1.68.0.
add 64dadad94e gnu: r-xvector: Update to 0.50.0.
add 59ae731c75 gnu: r-zellkonverter: Update to 1.20.0.
add bed3d1ca07 gnu: r-geneplotter: Update to 1.88.0.
add a129044714 gnu: r-oligoclasses: Update to 1.72.0.
add 8241a94bb1 gnu: r-oligo: Update to 1.74.0.
add 4a704cfc97 gnu: r-qfeatures: Update to 1.20.0.
add 03dbe8dac7 gnu: r-quantsmooth: Update to 1.76.0.
add c119d8842b gnu: r-qvalue: Update to 2.42.0.
add f6a9f76b47 gnu: r-apcomplex: Update to 2.76.0.
add 84fd1418a8 gnu: r-apeglm: Update to 1.32.0.
add e6fed4c342 gnu: r-mbecs: Update to 1.14.0.
add bbe970dcee gnu: r-mbkmeans: Update to 1.26.0.
add 0d98fdc92f gnu: r-multibac: Update to 1.20.0.
add 1c16c183fc gnu: r-multtest: Update to 2.66.0.
add d5a0bb460a gnu: r-graph: Update to 1.88.0.
add f261424a42 gnu: r-ggtreeextra: Update to 1.20.0.
add 8f992faaf6 gnu: r-pepsnmr: Update to 1.28.0.
add 63d270fea3 gnu: r-chippeakanno: Update to 3.44.0.
add 708b05a627 gnu: r-matrixgenerics: Update to 1.22.0.
add 4659be0572 gnu: r-marray: Update to 1.88.0.
add 096cdbaf01 gnu: r-cghbase: Update to 1.70.0.
add d6c8144665 gnu: r-cghcall: Update to 2.72.0.
add 4b2274878b gnu: r-qdnaseq: Update to 1.46.0.
add 94346b525a gnu: r-bayseq: Update to 2.44.0.
add dc7a7f62a3 gnu: r-chipcomp: Update to 1.40.0.
add c322013a0b gnu: r-riboprofiling: Update to 1.39.1.
add ab339acd31 gnu: r-riboseqr: Update to 1.44.0.
add 7752f6cea2 gnu: r-interactionset: Update to 1.38.0.
add 010cb53db1 gnu: r-genomicinteractions: Update to 1.44.0.
add 8eb01c469e gnu: r-ctc: Update to 1.84.0.
add bce8408835 gnu: r-goseq: Update to 1.62.0.
add 59180b0c1d gnu: r-glimma: Update to 2.20.0.
add be29ffd9ed gnu: r-glmgampoi: Update to 1.22.0.
add 313eb26770 gnu: r-rots: Update to 2.2.0.
add a1cc77674a gnu: r-plgem: Update to 1.82.0.
add d338e1cfc1 gnu: r-plyranges: Update to 1.30.1.
add d8d9533ed5 gnu: r-inspect: Update to 1.40.0.
add 882eab98aa gnu: r-dnabarcodes: Update to 1.40.0.
add 6954572314 gnu: r-ruvseq: Update to 1.44.0.
add 038e69805b gnu: r-biocneighbors: Update to 2.4.0.
add be65efcfe3 gnu: r-scaledmatrix: Update to 1.18.0.
add 7475d495f7 gnu: r-treeio: Update to 1.34.0.
add 1c74743c30 gnu: r-treesummarizedexperiment: Update to 2.18.0.
add a1590effc6 gnu: r-ggtree: Update to 4.0.1.
add 9672601222 gnu: r-metapod: Update to 1.18.0.
add 8b835586f5 gnu: r-biocsingular: Update to 1.26.1.
add 094c5ca1ac gnu: r-destiny: Update to 3.24.0.
add f0a441f2a8 gnu: r-chipexoqual: Update to 1.34.0.
add 85da81840d gnu: r-dnacopy: Update to 1.84.0.
add 828f34f080 gnu: r-hmmcopy: Update to 1.52.0.
add c5caa604a1 gnu: r-ebseq: Update to 2.8.0.
add 2956a02295 gnu: r-karyoploter: Update to 1.36.0.
add ae4712e58c gnu: r-lpsymphony: Update to 1.38.0.
add e84f95d06a gnu: r-ihw: Update to 1.38.0.
add 4818e326d8 gnu: r-icobra: Update to 1.38.0.
add 02e8f35898 gnu: r-residualmatrix: Update to 1.20.0.
add 2e8a79026a gnu: r-batchelor: Update to 1.26.0.
add 195790856a gnu: r-mast: Update to 1.36.0.
add fcd65ee498 gnu: r-monocle: Update to 2.38.0.
add c1a79ebfea gnu: r-sangerseqr: Update to 1.46.0.
add 293a21f260 gnu: r-noiseq: Update to 2.54.0.
add 1c233955e9 gnu: r-scdd: Update to 1.34.0.
add 372600be6a gnu: r-scone: Update to 1.34.0.
add 1db87305ff gnu: r-geoquery: Update to 2.78.0.
add b7a807b537 gnu: r-illuminaio: Update to 0.52.0.
add 98a4a816d0 gnu: r-siggenes: Update to 1.84.0.
add 679e502754 gnu: r-bumphunter: Update to 1.52.0.
add 8793067e6b gnu: r-bumpymatrix: Update to 1.18.0.
add 0969e4406f gnu: r-mia: Update to 1.18.0.
add 976f53c3ce gnu: r-microbiome: Update to 1.32.0.
add efe308ba53 gnu: r-milor: Update to 2.6.0.
add 2fe66474b4 gnu: r-minfi: Update to 1.56.0.
add 782fd7172a gnu: r-missmethyl: Update to 1.44.0.
add a251dca099 gnu: r-methylumi: Update to 2.56.0.
add 9ebc80618e gnu: r-lefser: Update to 1.20.2.
add ada4210359 gnu: r-lumi: Update to 2.62.0.
add 4c460ab4b8 gnu: r-linnorm: Update to 2.34.0.
add 7e294e7038 gnu: r-ioniser: Update to 2.34.0.
add 0bc867019d gnu: r-tradeseq: Update to 1.24.0.
add f9ef4c68db gnu: r-varianttools: Update to 1.51.0.
add becb321df0 gnu: r-heatplus: Update to 3.18.0.
add 92e98c7fff gnu: r-helloranges: Update to 1.36.0.
add c72b80fa38 gnu: r-gosemsim: Update to 2.36.0.
add c40a0d45bf gnu: r-anota: Update to 1.58.0.
add f37e0c6075 gnu: r-anota2seq: Update to 1.32.0.
add 914d3670ac gnu: r-fcscan: Update to 1.24.0.
add 30d49ffef3 gnu: r-fgsea: Update to 1.36.0.
add 807a8ae9c7 gnu: r-dose: Update to 4.4.0.
add 6df0a55a90 gnu: r-enrichedheatmap: Update to 1.40.0.
add fd0a17f2d1 gnu: r-enrichplot: Update to 1.30.3.
add f2f6630769 gnu: r-clusterprofiler: Update to 4.18.2.
add b7296244cb gnu: r-clusterexperiment: Update to 2.30.0.
add d36b275212 gnu: r-mlinterfaces: Update to 1.90.0.
add 000042b8d1 gnu: r-annaffy: Update to 1.82.0.
add 9df122e080 gnu: r-a4core: Update to 1.58.0.
add 8e38519541 gnu: r-a4classif: Update to 1.58.0.
add 133a6ac469 gnu: r-a4preproc: Update to 1.58.0.
add 6e0dcebabd gnu: r-a4reporting: Update to 1.58.0.
add 9737af1c9d gnu: r-a4base: Update to 1.58.0.
add 764be589aa gnu: r-a4: Update to 1.58.0.
add c4bac25dff gnu: r-abseqr: Update to 1.28.0.
add 6dcc83da2b gnu: r-bacon: Update to 1.38.0.
add aa377b2ea7 gnu: r-motifdb: Update to 1.52.0.
add fdb61b51e9 gnu: r-motifbreakr: Update to 2.24.0.
add 6ac6236cbd gnu: r-motifstack: Update to 1.54.0.
add 08a5cf9ca5 gnu: r-genomicscores: Update to 2.22.0.
add f01c1a4641 gnu: r-genomicstate: Update to 0.99.17.
add fa60955eb6 gnu: r-atacseqqc: Update to 1.34.0.
add f0207e737f gnu: r-gofuncr: Update to 1.30.0.
add b7910e08f7 gnu: r-annotationtools: Update to 1.84.0.
add 6209863d3d gnu: r-allelicimbalance: Update to 1.48.0.
add 6ec5191db1 gnu: r-aucell: Update to 1.32.0.
add 032c415c8e gnu: r-ebimage: Update to 4.52.0.
add 6c78345785 gnu: r-yamss: Update to 1.36.0.
add 00c03118ac gnu: r-gtrellis: Update to 1.42.0.
add e4d11a2023 gnu: r-somaticsignatures: Update to 2.46.0.
add 2eb4c881d4 gnu: r-yapsa: Update to 1.36.0.
add 1b84e983af gnu: r-gcrma: Update to 2.82.0.
add b3b0286d35 gnu: r-quantro: Update to 1.44.0.
add aea400b35d gnu: r-yarn: Update to 1.36.0.
add 359c2e05f0 gnu: r-roar: Update to 1.46.0.
add 1277ab018c gnu: r-massspecwavelet: Update to 1.76.0.
add 9ae4c7f035 gnu: r-xcms: Update to 4.8.0.
add 1cf9b69523 gnu: r-wrench: Update to 1.28.0.
add 42857275a9 gnu: r-wiggleplotr: Update to 1.34.0.
add 46c6f73156 gnu: r-widgettools: Update to 1.88.0.
add fff41b13ed gnu: r-webbioc: Update to 1.82.0.
add 98182abe01 gnu: r-zinbwave: Update to 1.32.0.
add eb521b1828 gnu: r-zfpkm: Update to 1.32.0.
add 0860440b31 gnu: r-rbowtie2: Update to 2.16.0.
add 9263d5ad28 gnu: r-progeny: Update to 1.32.0.
add f950b9dbef gnu: r-arrmnormalization: Update to 1.50.0.
add 2381c8aecb gnu: r-biocfilecache: Update to 3.0.0.
add 46017c4c47 gnu: r-iclusterplus: Update to 1.46.0.
add 9c10f14c7c gnu: r-rbowtie: Update to 1.50.0.
add 01f25e3fcf gnu: r-sgseq: Update to 1.44.0.
add 5b6778251f gnu: r-rhisat2: Update to 1.26.0.
add 98d6af94b8 gnu: r-quasr: Update to 1.50.0.
add bfdad169dd gnu: r-rqc: Update to 1.44.0.
add 34bcbd950c gnu: r-multidataset: Update to 1.38.0.
add c28de91b71 gnu: r-ropls: Update to 1.42.0.
add ab84a7429b gnu: r-biosigner: Update to 1.38.0.
add e82d12d6eb gnu: r-annotatr: Update to 1.36.0.
add 458fcade10 gnu: r-rsubread: Update to 2.24.0.
add e97ec7284a gnu: r-flowai: Update to 1.40.0.
add e48f590494 gnu: r-consensusclusterplus: Update to 1.74.0.
add bf257c2af5 gnu: r-cytolib: Update to 2.22.0.
add 5b691db080 gnu: r-flowcore: Update to 2.22.0.
add a98bbb51d2 gnu: r-flowmeans: Update to 1.70.0.
add 36069ad20b gnu: r-ncdfflow: Update to 2.56.0.
add 7429442059 gnu: r-ggcyto: Update to 1.38.0.
add 3e63b1e1e9 gnu: r-flowviz: Update to 1.74.0.
add 58a9b3a486 gnu: r-flowclust: Update to 3.48.0.
add ab3abb566d gnu: r-rprotobuflib: Update to 2.22.0.
add 5c06e639bb gnu: r-flowworkspace: Update to 4.22.0.
add f4b7a09969 gnu: r-flowstats: Update to 4.22.0.
add f340ee6bb5 gnu: r-opencyto: Update to 2.22.0.
add 137d826db0 gnu: r-cytoml: Update to 2.22.0.
add b3f1de601b gnu: r-flowsom: Update to 2.18.0.
add 8250926e64 gnu: r-mixomics: Update to 6.34.0.
add 483c61d534 gnu: r-depecher: Update to 1.26.0.
add 22841146f4 gnu: r-rcistarget: Update to 1.29.0.
add 0caebbf845 gnu: r-chicago: Update to 1.38.0.
add 0db11c336b gnu: r-cicero: Update to 1.28.0.
add 32c0eef1f0 gnu: r-circrnaprofiler: Update to 1.24.0.
add 4833e87410 gnu: r-genie3: Update to 1.32.0.
add ecb0bb9ff2 gnu: r-roc: Update to 1.86.0.
add ee1a8f785c gnu: r-watermelon: Update to 2.16.0.
add 07c16d2827 gnu: r-gdsfmt: Update to 1.46.0.
add 389b0a6f58 gnu: r-bigmelon: Update to 1.36.0.
add ab58162180 gnu: r-wavcluster: Update to 2.44.0.
add b45bf581ba gnu: r-tilingarray: Update to 1.88.0.
add d07d07d626 gnu: r-variantfiltering: Update to 1.46.0.
add cab337f056 gnu: r-variancepartition: Update to 1.40.0.
add 00ce45bb92 gnu: r-htqpcr: Update to 1.64.0.
add add04e3034 gnu: r-ucell: Update to 2.14.0.
add 35fede579d gnu: r-ucsc-utils: Update to 1.6.0.
add dd6d2ad049 gnu: r-unifiedwmwqpcr: Update to 1.46.0.
add 6b3953ee5d gnu: r-universalmotif: Update to 1.28.0.
add 9f1df24607 gnu: r-ace: Update to 1.28.0.
add 2babf60afe gnu: r-acgh: Update to 1.88.0.
add b03ce433c3 gnu: r-acme: Update to 2.66.0.
add c6cbcf50ca gnu: r-acde: Update to 1.40.0.
add 7afcc0ca0c gnu: r-bicare: Update to 1.68.0.
add 55f5fc265e gnu: r-bifet: Update to 1.30.0.
add 1bcb8d52ce gnu: r-rsbml: Update to 2.68.0.
add 6fe6808db0 gnu: r-hybridmtest: Update to 1.54.0.
add faae229469 gnu: r-hypergraph: Update to 1.82.0.
add d04d5d492c gnu: r-hyperdraw: Update to 1.62.0.
add 2a2c134f7d gnu: r-chemmineob: Update to 1.48.0.
add 3fc8dc7fdf gnu: r-fmcsr: Update to 1.52.0.
add 2fce84f3f5 gnu: r-bioassayr: Update to 1.48.0.
add a80f9b8719 gnu: r-biobroom: Update to 1.42.0.
add 8bf2be75d7 gnu: r-graphite: Update to 1.56.0.
add 82a4f3ef07 gnu: r-reactomepa: Update to 1.54.0.
add bc97bd411f gnu: r-ebarrays: Update to 2.74.0.
add 99464bb630 gnu: r-biocbaseutils: Update to 1.12.0.
add 97016e98b6 gnu: r-bioccheck: Update to 1.46.0.
add 1342508c1a gnu: r-biocgraph: Update to 1.72.0.
add bc12f737c6 gnu: r-biocstyle: Update to 2.38.0.
add 4869ec092a gnu: r-biocviews: Update to 1.78.0.
add 9c151c02fb gnu: r-experimenthub: Update to 3.0.0.
add 5d9d7a3164 gnu: r-experimenthubdata: Update to 1.36.0.
add 5aee5423cb gnu: r-grohmm: Update to 1.44.0.
add 6b7057d56e gnu: r-multiassayexperiment: Update to 1.36.1.
add e8a1a26e27 gnu: r-biocor: Update to 1.34.0.
add e949a69e10 gnu: r-biocpkgtools: Update to 1.27.12.
add 21be32b521 gnu: r-biocset: Update to 1.24.0.
add 87a11d69c6 gnu: r-biocworkflowtools: Update to 1.36.0.
add 95a5e84c38 gnu: r-biodist: Update to 1.82.0.
add 875edbbcf7 gnu: r-rgreat: Update to 2.12.1.
add 8a38952f0b gnu: r-m3c: Update to 1.32.0.
add eae44928da gnu: r-icens: Update to 1.82.0.
add 54ef097071 gnu: r-preprocesscore: Update to 1.72.0.
add 2f81d29fe2 gnu: r-s4arrays: Update to 1.10.0.
add 87dd8093e2 gnu: r-s4vectors: Update to 0.48.0.
add 4c895c454c gnu: r-rgraphviz: Update to 2.54.0.
add a6a2a8a344 gnu: r-fishpond: Update to 2.16.0.
add 528e1f19ba gnu: r-fithic: Update to 1.36.0.
add 9a3212754b gnu: r-h5mread: Update to 1.2.0.
add 97e237bcf7 gnu: r-hitc: Update to 1.54.0.
add 2dfd0bec3e gnu: r-hdf5array: Update to 1.38.0.
add 1797aba70d gnu: r-rhdf5lib: Update to 1.32.0.
add 922e9334c1 gnu: r-beachmat: Update to 2.26.0.
add 7443c565ff gnu: r-beachmat-hdf5: Update to 1.8.0.
add a6afc4a575 gnu: r-beaddatapackr: Update to 1.62.0.
add 3d91f6a72d gnu: r-cner: Update to 1.46.0.
add 958dfc42db gnu: r-tfbstools: Update to 1.48.0.
add f51829c2d1 gnu: r-maftools: Update to 2.26.0.
add cb6b7ca64a gnu: r-motifmatchr: Update to 1.32.0.
add 7904e9b728 gnu: r-chromvar: Update to 1.32.0.
add c2047053c9 gnu: r-singlecellexperiment: Update to 1.32.0.
add 8e5e4c4a7b gnu: r-scuttle: Update to 1.20.0.
add 573de09389 gnu: r-scater: Update to 1.38.0.
add 16f00216ad gnu: r-scran: Update to 1.38.0.
add 21efa1a295 gnu: r-sparsearray: Update to 1.10.2.
add a8a0853e31 gnu: r-sparsematrixstats: Update to 1.22.0.
add 987e2d7c07 gnu: r-spatialexperiment: Update to 1.20.0.
add 40225786c4 gnu: r-delayedmatrixstats: Update to 1.32.0.
add 0e5fa6a0e2 gnu: r-msfeatures: Update to 1.18.0.
add f3839a257e gnu: r-biocio: Update to 1.20.0.
add 9e718a65bd gnu: r-msmseda: Update to 1.48.0.
add b41b9d1c4d gnu: r-msmstests: Update to 1.48.0.
add ccf77ddf07 gnu: r-catalyst: Update to 1.34.1.
add 03fb8b030f gnu: r-ggbio: Update to 1.58.0.
add 7201a66cb3 gnu: r-gviz: Update to 1.54.0.
add f114fbaf5f gnu: r-gwascat: Update to 2.42.0.
add e74755b6f1 gnu: r-gwastools: Update to 1.56.0.
add 066270af1e gnu: r-kegggraph: Update to 1.70.0.
add ea86c510d2 gnu: r-ldblock: Update to 1.40.0.
add f9e2f26f43 gnu: r-parody: Update to 1.68.0.
add 3eda99f186 gnu: r-pathview: Update to 1.50.0.
add b114962042 gnu: r-snprelate: Update to 1.44.0.
add d075f5fe3f gnu: r-snpstats: Update to 1.60.0.
add 379e68afb4 gnu: r-guitar: Update to 2.26.0.
add f55f7add71 gnu: r-megadepth: Update to 1.20.0.
add 0d5bd5b048 gnu: r-beclear: Update to 2.26.0.
add 9c6512c77e gnu: r-bgeecall: Update to 1.26.0.
add 03a7812a8d gnu: r-bgeedb: Update to 2.36.0.
add bc0b1a3145 gnu: r-biobtreer: Update to 1.22.0.
add 088304d2f8 gnu: r-minet: Update to 3.68.0.
add 1dd3d45e78 gnu: r-genetclassifier: Update to 1.50.0.
add a67efdfbcb gnu: r-dir-expiry: Update to 1.18.0.
add 39425581fc gnu: r-basic4cseq: Update to 1.46.0.
add ee72d162d4 gnu: r-basics: Update to 2.22.0.
add 2ddcaae239 gnu: r-basicstarrseq: Update to 1.38.0.
add 0d3be6072d gnu: r-basilisk: Update to 1.22.0.
add 3f617d9740 gnu: r-bayesknockdown: Update to 1.36.0.
add 57eb7719c6 gnu: r-bayesspace: Update to 1.20.0.
add b346fc99c0 gnu: r-baynorm: Update to 1.28.0.
add fdea6ced03 gnu: r-bbcanalyzer: Update to 1.40.0.
add 473cd02dd9 gnu: r-bcrank: Update to 1.72.0.
add d212a4534c gnu: r-biocthis: Update to 1.20.0.
add 70871e17b3 gnu: r-biodb: Update to 1.18.0.
add 851f169fc7 gnu: r-mvcclass: Update to 1.84.0.
add 33783c23ae gnu: r-biomvcclass: Update to 1.78.0.
add e736705c10 gnu: r-biomvrcns: Update to 1.50.0.
add 766e19ead8 gnu: r-bionero: Update to 1.18.0.
add b32387c382 gnu: r-bionet: Update to 1.70.0.
add 93c5b348cf gnu: r-bioqc: Update to 1.38.0.
add f58601d80a gnu: r-biotip: Update to 1.24.0.
add 1360407283 gnu: r-biotmle: Update to 1.34.0.
add 10543af612 gnu: r-dada2: Update to 1.38.0.
add 830314ef8a gnu: r-dmrseq: Update to 1.30.0.
add c8ddd5a8cf gnu: r-omicade4: Update to 1.50.0.
add c3c37b84b8 gnu: r-biscuiteer: Update to 1.24.0.
add 950b72b066 gnu: r-tcgabiolinks: Update to 2.38.0.
add 63462c07a3 gnu: r-tricycle: Update to 1.18.0.
add 519a57ba60 gnu: r-tximeta: Update to 1.28.0.
add e82d807f1c gnu: r-selectr: Update to 0.5-0.
add 8e2a59ead2 gnu: r-qs2: Update to 0.1.6.
add 50db9628fc gnu: r-sfsmisc: Update to 1.1-23.
add c8085b8007 gnu: r-abn: Update to 3.1.12.
add a3efacb364 gnu: r-ggside: Update to 0.4.1.
add 71346f767d gnu: r-geometries: Update to 0.2.5.
add 066c228ded gnu: r-cubature: Update to 2.1.4-1.
add c5c0f904e2 gnu: r-insight: Update to 1.4.3.
add 86b2c8dbc7 gnu: r-brglm2: Update to 1.0.1.
add 9815cbb2a0 gnu: r-rapidjsonr: Update to 1.2.1.
add 0dbe03afac gnu: r-parameters: Update to 0.28.3.
add 5a1c4c2301 gnu: r-spatstat-explore: Update to 3.6-0.
add de9a97ede6 gnu: r-spatstat-random: Update to 3.4-3.
add fb331f1eff gnu: r-mlr3measures: Update to 1.2.0.
add 27530f1000 gnu: r-highs: Update to 1.12.0-1.
add e646f12a9d gnu: r-paws-common: Update to 0.8.7.
add b44debeed4 gnu: r-rcpparmadillo: Update to 15.2.2-1.
add 4812369fa5 gnu: r-msigdbr: Enable tests.
add eec6a55ed4 gnu: r-gutils: Add missing input and patch for testthat
compatibility.
add d5ff1cf682 gnu: r-tidytext: Add missing input.
add a4543d40cc gnu: r-rvenn: Skip four tests.
add 3938247527 gnu: r-manipulatewidget: Skip bad tests.
add e18ec2c142 gnu: r-rpresto: Disable tests.
add 8252a13fb4 gnu: r-ihw: Add missing test inputs.
add 38894961c2 gnu: r-mosaic: Add missing test inputs.
add a4af63d388 gnu: r-bindr: Adjust for testthat compatibility.
add 37a20d67b7 gnu: r-trycatchlog: Adjust for testthat compatibility.
add 77cc7fba69 gnu: r-seqminer: Disable two tests.
add 99449eafb6 gnu: r-metabocoreutils: Update to 1.18.1.
add 94262f11fb gnu: r-papaja: Add missing input and enable all tests.
add 6e31271d2f gnu: r-annotationhubdata: Add missing input.
add 5492b50068 gnu: r-tcgautils: Update to 1.30.1.
add 1ec0fb5d18 gnu: r-abaenrichment: Adjust for testthat compatibility.
add 0b8a12d2b2 gnu: r-ggmosaic: Make compatible with latest ggplot2.
add 1464b58032 gnu: r-gchain: Update to 0.2.0-2.19f8bb9.
add 084ab3ba79 gnu: r-ggvenn: Add missing test input.
add c2b7144a80 gnu: r-mi: Add missing inputs and skip bad test.
add 7ef8abcf75 gnu: r-latex2exp: Skip bad test.
add fd626f1972 gnu: r-operator-tools: Adjust for testthat compatibility.
add 328d27e116 gnu: r-cytoexplorer: Skip tests using with_mock.
add 5ad6d7a3ed gnu: r-ggtern: Update to 4.0.0.
add 4f3cd77c1f gnu: r-spatstat-model: Update to 3.5-0.
add 170b001457 gnu: r-jsonify: Update to 1.2.3.
add 059ef94cce gnu: r-gensa: Update to 1.1.15.
add 3749ffe16e gnu: r-geojsonsf: Update to 2.0.5.
add 0e41a338cb gnu: r-tsp: Update to 1.2.6.
add 4176953c94 gnu: r-word2vec: Update to 0.4.1.
add 0392c1ba81 gnu: r-doc2vec: Update to 0.2.2.
add efdaebc3cc gnu: r-sf: Update to 1.0-23.
add e3bae84b0b gnu: r-sfheaders: Update to 0.4.5.
add 1f3a3dd9fc gnu: r-lintr: Update to 3.3.0-1.
add 36bfefc8db gnu: r-terra: Update to 1.8-86.
add 6051b6e737 gnu: r-mlr3fselect: Update to 1.5.0.
add dce9abc1f1 gnu: r-mlr3inferr: Update to 0.2.1.
add 22c9b4e430 gnu: r-bbotk: Update to 1.8.1.
add 15acb64a28 gnu: r-btm: Update to 0.3.8.
add 2efb4f3bd4 gnu: r-ztpln: Update to 0.1.3.
add 5270da7968 gnu: boost: Fix build on non-x86_64 non-mingw32.
add c248c4442b system: examples: Add machine argument to qemu for hurd64
add 8c1fa0ed12 services: hurd-vm: Add machine argument for qemu for 64 bit
images.
add 6618803875 monad-repl: Improve docstring for "verbosity" meta command.
add 94f881388d gnu: pixman: auto-detect arm-simd optimizations for arm32
targets.
add 2a1f1162e5 gnu: tensorflow-lite: Fix build.
add c517ea78b4 gnu: Add movit.
add 9ce1332e32 gnu: mlt: Update to 7.34.1.
add 3b0f3169c3 gnu: gcal: Cleanup.
add 68aeff43a5 gnu: gcal: Move from (gnu packages gcal) to (gnu packages
calendar).
add 33c84c9626 gnu: Add perl-digest-sha3.
add 2ececb30fd gnu: adaptivecpp: Update to 25.10.0.
add 1d0c5c1bd3 gnu: emacs-cond-let: Update to 0.2.0.
add 5219965148 gnu: emacs-corfu: Update to 2.5.
add 0d2d439ff5 gnu: emacs-cape: Update to 2.3.
add ab27d3ee9a gnu: emacs-debbugs: Update to 0.46.
add 33667223e3 gnu: emacs-consult: Update to 3.0.
add 200154b70f gnu: emacs-marginalia: Update to 2.5.
add 86e8b6a869 gnu: emacs-tempel: Update to 1.8.
add 21d547688d gnu: emacs-xelb: Update to 0.22.
add 3c8853fa7f gnu: emacs-ement: Update to 0.17.
add 0b42a0fd3b gnu: emacs-orgit: Update to 2.1.0.
add 05c5d39ff6 gnu: emacs-orgit-forge: Update to 1.1.0.
add 56797f2af7 gnu: emacs-vertico: Update to 2.6.
add c6e6d113d0 gnu: emacs-modus-themes: Update to 5.1.0.
add 3b22197b0f gnu: emacs-standard-themes: Update to 3.0.2.
add 01bb0f2aa1 gnu: emacs-ef-themes: Update to 2.0.1.
add 5eb9fda4d9 gnu: niri: Restore installation of bin/niri.
add 4d2a4dde6e gnu: xwayland-satellite: Fix installation.
add 336ba8de2f gnu: mame: Fix build.
add 4e71ab18de gnu: trilinos-serial-xyce, trilinos-parallel-xyce: Update
to 14.4.0.
add 2069513380 gnu: xyce-serial, xyce-parallel: Update to 7.10.0.
add 2b7e7a0165 gnu: livemedia-utils: Use gexps.
add 4be2dc6bd3 gnu: livemedia-utils: Update to 2025.11.06.
add 068752bdc6 gnu: libredwg: Fix build.
add 81daa9ab9f gnu: tmux: Update to 3.6.
add b422f0c493 gnu: tensorflow-lite: Update to 2.16.2.
add 13f29e11fd gnu: xshogi: Fix build.
add b889d944a7 gnu: wev: Update to 1.1.0.
add c62b3b1988 gnu: perl-tidy: Update to 20250912.
add b4555f7fe9 gnu: fuzzel: Update to 1.13.1.
add 3b5ef8ef85 gnu: maak: Update to 0.2.12.
add 0871d3a9ed gnu: calibre: Update to 8.15.0.
add 27b24a58cb gnu: Add openjdk25.
add 3e93af90ae gnu: perl-test-perltidy: Update to 20230226.
add fae1e8e218 gnu: clusterssh: Refresh input.
add 062a3f260a gnu: perl-critic: Refresh input.
add 9cb133491b gnu: perltidy: Deprecate.
add 9f0526cc13 gnu: weechat: Update to 4.8.0.
add 5de79373c2 gnu: openjdk: ensure new versions can be found by the
updater.
add b7a93ce80c gnu: gerbv: Move to electronics.
add c0f165f0fd gnu: apycula: Update to 0.28.
add 1a1ed88d89 gnu: systemc: Update to 3.0.2.
add 4a47e22573 gnu: python-cocotb: Update to 2.0.1.
add 733fc8eceb gnu: vlc: Fix build with newer livemedia-utils.
add 9bdf65dedc gnu: python-cmaes: Update to 0.12.0.
add 2445bc955b gnu: bdb-5.3: Do not inherit from bdb-4.8.
add d32c8fadd0 gnu: bdb: Do not inherit from bdb-4.8.
add dd6560c4e0 gnu: Remove bdb-4.8.
add d94438acbd gnu: bitcoin-cash-node: Refresh input.
add 0fc08ce2bd gnu: bitcoin-core: Improve package.
add c012b79655 gnu: flightgear: Update to 2024.1.3.
add 0d306cec37 gnu: hyprutils: Update to 0.10.4.
add ecb3a862f1 gnu: hyprgraphics: Update to 0.4.0.
add bcec0e51e3 gnu: aquamarine: Update to 0.10.0.
add 375dddd1cf gnu: hyprlang: Update to 0.6.6.
add d4b4a6ae8d gnu: xdg-desktop-portal-hyprland: Update to 1.3.11.
add 6a740795e3 gnu: hyprland: Update to 0.52.1.
add 542fbd7848 gnu: hyprpaper: Update to 0.7.6.
add b873908a2a gnu: nicotine+: Add python-pycairo input.
add c7da8b6129 gnu: go-cloud-google-com-go-compute-metadata: Update to
0.8.0.
add c84d7c006c gnu: Add go-go-opentelemetry-io-auto-sdk.
add cc8f0325b8 gnu: go-go-opentelemetry-io-otel: Update to 1.37.0.
add a35ba22385 gnu:
go-go-opentelemetry-io-contrib-instrumentation-net-http-otelhttp: Update to
0.62.0.
add 105e986734 gnu: Add
go-go-opentelemetry-io-contrib-instrumentation-google-golang-org-grpc-otelgrpc.
add a2107b25d7 gnu: Add go-github-com-googleapis-gax-go-v2.
add 1aff5ba71e gnu: Add
go-github-com-googleapis-enterprise-certificate-proxy.
add bcf3645582 gnu: Add go-github-com-google-s2a-go.
add 85a5eb9ee9 gnu: Add go-cloud-google-com-go-auth.
add 0195255d75 gnu: Add go-cloud-google-com-go-auth-oauth2adapt.
add 79ec6628b9 gnu: Add go-github-com-a8m-tree.
add cf611327f4 gnu: Add go-github-com-aalpar-deheap.
add eeff8e681f gnu: Add go-github-com-abbot-go-http-auth
add b6987c589b gnu: Add go-github-com-nfnt-resize.
add ba64dcf162 gnu: Add go-github-com-anacrolix-ffprobe.
add aa7c7f72ad gnu: Add go-github-com-anacrolix-dms.
add 29d8d15eed gnu: Add go-github-com-appscode-go-querystring.
add 50dbd432fc gnu: Add go-github-com-azure-azure-sdk-for-go-sdk-internal.
add 21db9b5003 gnu: Add go-github-com-azure-azure-sdk-for-go-sdk-azcore.
add e446980197 gnu: Add
go-github-com-azuread-microsoft-authentication-library-for-go.
add 7d1dbf532e gnu: Add
go-github-com-azure-azure-sdk-for-go-sdk-azidentity.
add 6d78b2bffa gnu: Add
go-github-com-azure-azure-sdk-for-go-sdk-storage-azblob.
add 8f14e79833 gnu: Add
go-github-com-azure-azure-sdk-for-go-sdk-storage-azfile.
add 15ff22eb81 gnu: Add go-github-com-bradenaw-juniper.
add d0fd333a5e gnu: Add go-github-com-bradfitz-iter.
add 4b6f6116f4 gnu: Add go-github-com-buengese-sgzip.
add 1e44558d9d gnu: Add go-github-com-calebcase-tmpfile
add 4f23f3d885 gnu: Add go-github-com-chilts-sid
add 40ce942de6 gnu: Add go-github-com-heimdalr-dag.
add 13a91ac4df gnu: Add go-github-com-cloudinary-cloudinary-go-v2.
add d1d55f6703 gnu: Add go-github-com-geoffgarside-ber.
add 5e2c24798b gnu: Add go-github-com-cloudsoda-sddl.
add 85cf4b7311 gnu: Add go-github-com-cloudsoda-go-smb2.
add c164488363 gnu: Add go-github-com-colinmarc-hdfs-v2.
add b0c1610622 gnu: Add go-github-com-cronokirby-saferith.
add a07cb7ae92 gnu: Add go-github-com-dropbox-dropbox-sdk-go-unofficial-v6.
add cad9cf4805 gnu: Add go-github-com-dsnet-try.
add ee5dd04847 gnu: Add go-github-com-panjf2000-ants-v2.
add c1ce1659b6 gnu: Add go-github-com-lpar-date.
add 7194a6d276 gnu: Add go-github-com-modocache-gover.
add 8bd67b7af9 gnu: Add go-github-com-dnaeon-go-vcr.
add cdadf4480d gnu: go-gopkg-in-dnaeon-go-vcr-v3: Update to 3.2.2.
add 63f29e08c8 gnu: go-gopkg-in-dnaeon-go-vcr-v4: Update to 4.0.6.
add de104247cb gnu: Add go-github-com-snabb-httpreaderat.
add bfc731d3c1 gnu: Add go-github-com-winfsp-cgofuse.
add 612a9b562d gnu: Add go-github-com-files-com-files-sdk-go-v3.
add fb4c32b45e gnu: Add go-github-com-go-resty-resty-v2.
add e6dfc01f32 gnu: Add go-github-com-emersion-go-imap-uidplus.
add 8c9eaa5bd9 gnu: Add go-github-com-protonmail-go-mime.
add f3c6382e8d gnu: Add go-github-com-protonmail-gopenpgp-v2.
add 6cb8480d5b gnu: Add go-github-com-protonmail-bcrypt.
add 98e1563d8a gnu: Add go-github-com-protonmail-go-srp.
add 65406213eb gnu: Add go-github-com-protonmail-go-mbox.
add 4cf3bcd1e8 gnu: Add go-github-com-protonmail-gluon.
add ee587e7684 gnu: Add go-github-com-henrybear327-go-proton-api.
add b971ee72ee gnu: Add go-github-com-relvacode-iso8601.
add 3429a69eca gnu: Add go-github-com-henrybear327-proton-api-bridge.
add 69c0bfbb99 gnu: Add go-github-com-ibm-go-sdk-core.
add 6a9e596032 gnu: Add go-github-com-spacemonkeygo-monkit-v3.
add fdb1ef8d1d gnu: Add go-github-com-zeebo-errs.
add a68707d3e7 gnu: Add go-github-com-zeebo-float16.
add d660119064 gnu: Add go-github-com-zeebo-sudo.
add bac21a2f76 gnu: Add go-github-com-zeebo-structs.
add 27a9ef62d7 gnu: Add go-github-com-zeebo-incenc.
add 332fe087eb gnu: Add go-github-com-zeebo-admission-v3.
add b077b5817f gnu: Add go-github-com-zeebo-goof.
add 6cbd7532a3 gnu: Add go-github-com-jtolio-crawlspace.
add ecb989160a gnu: Add go-github-com-jtolio-crawlspace-tools.
add 6f91b26dc7 gnu: Add go-github-com-jtolds-tracetagger-v2.
add 923626d4f5 gnu: Add go-github-com-bmkessler-fastdiv.
add 0e9ba9bee5 gnu: Add go-github-com-jtolio-noiseconn.
add 46d9e2ca69 gnu: Add go-github-com-koofr-go-httpclient.
add e0db7372da gnu: Add go-github-com-koofr-go-koofrclient.
add 38cffa58ba gnu: Add go-github-com-lanrat-extsort.
add 89fe443c48 gnu: Add go-github-com-max-sum-base32768.
add e8a2f30bdf gnu: Add go-github-com-minio-xxml.
add f842ab680d gnu: Add go-github-com-sony-gobreaker.
add ace88336ed gnu: Add go-github-com-oracle-oci-go-sdk-v65.
add bffd266e42 gnu: Add go-github-com-jeffail-gabs.
add 98bcae4a8d gnu: Add go-github-com-pengsrc-go-shared.
add 5b0b39440a gnu: Add go-github-com-putdotio-go-putio.
add 439c30b17b gnu: Add go-github-com-putdotio-go-putio-for-rclone.
add c2cdc97917 gnu: Add go-github-com-shabbyrobe-gocovmerge.
add be956cba63 gnu: Add go-github-com-ryszard-goskiplist.
add d9ba71939c gnu: Add go-github-com-rclone-gofakes3.
add f3ae27fa84 gnu: Add go-github-com-t3rm1n4l-go-mega.
add e0d82b4381 gnu: Add go-github-com-unknwon-goconfig.
add dac72783f6 gnu: Add go-github-com-rasky-go-xdr.
add 13d0fb4371 gnu: Add go-github-com-willscott-go-nfs-client.
add 29c9d5db40 gnu: Add go-github-com-willscott-go-nfs.
add 40744d1205 gnu: Add go-github-com-yunify-qingstor-sdk-go-v3.
add a2bb6a3883 gnu: Add go-goftp-io-server-v2.
add 0dfb530ae3 gnu: Add go-google-golang-org-api.
add 1501cbccee gnu: Add go-gopkg-in-validator-v2.
add 0c75247f73 gnu: Add go-storj-io-drpc.
add 3fabddae1c gnu: Add go-storj-io-picobuf.
add aee7f98a9b gnu: Add go-storj-io-eventkit.
add 4e746f05da gnu: Add go-storj-io-common.
add 64fa05fd4a gnu: Add go-storj-io-infectious.
add e645491770 gnu: Add go-storj-io-uplink.
add 5c533cf90f gnu: Add go-github-com-dop251-scsu.
add 2cb6ef2db7 gnu: Add go-golang-org-x-mobile.
add ac8d0d3701 gnu: go-go-etcd-io-bbolt: Update to 1.4.3.
add 600ae9af6a gnu: rclone: Update to 1.71.2.
add 0efffc51a5 gnu: wcslib: Fix source URL.
add 08243fb6fe gnu: python-astropy-iers-data: Update to
0.2025.11.10.0.38.31.
add 489b1dd335 gnu: python-asdf: Update to 5.1.0.
add 945b4166bc gnu: python-asdf-astropy: Update to 0.9.0.
add e003a89662 gnu: Add specification-astropy-data.
add bf645aa895 gnu: python-astropy: Add missing coordinates data file.
add 7b2c0c8a66 gnu: python-pyvo: Update to 1.8.
add 3a81584342 gnu: python-reproject: Clean up __pycache__ after tests.
add f690a8b0bf gnu: python-pyregion: Simplify and improve package.
add c8a3d6163a gnu: python-pyavm: Update to 0.9.8.
add 986421642b gnu: python-sunpy: Update to 7.0.3.
add 1f218230cd gnu: python-roman-datamodels: Update to 0.28.1.
add e6b0eaacfa gnu: python-spherical-geometry: Update to 1.3.4.
add 869c1eec0e gnu: python-stsci-imagestats: Update to 1.8.4.
add 23bae6f231 gnu: Add fortran-forutils.
add 30d7ec81f1 gnu: python-camb: Update to 1.6.5.
add a522a71d6e gnu: ginga: Add python-setuptools-scm to native inputs.
add 20bbeb0686 gnu: python-cmyt: Remove redundant relax-requirements phase.
add eff9431476 gnu: python-linetools: Reduce closure size.
add a9547a6c09 gnu: python-cobaya: Update to 3.6.
add af5a06c2f3 gnu: casacore: Update to 3.8.0.
add 75840da919 gnu: python-colossus: Update to 1.3.9-1.8c5546e.
add 2995fa0c0e gnu: python-coolest: Update to 0.1.11.
add 89008ad84c gnu: Add python-fgivenx.
add 15af1d55df gnu: Add python-nestcheck.
add a310072bef gnu: python-lenstronomy: Enable more tests and adjust
inputs.
add 090b085de1 gnu: Add python-lenstronomy-minimal.
add 6ac1397796 gnu: python-unyt: Update to 3.0.4.
add ccf4371026 gnu: python-yt: Update to 4.4.2.
add 4675385120 gnu: python-pixell: Update to 0.31.3.
add 0b23274127 gnu: python-stwcs: Update to 1.7.5.
add 74f26ccb38 gnu: python-astroscrappy: Update to 1.3.0.
add 1f36997f5b gnu: python-bayesicfitting: Update to 3.2.5.
add 0605bbf203 gnu: Add python-gwcs-0.21.
add df8015fd26 gnu: python-pynbody: Update to 2.3.3.
add 037e52cc88 gnu: python-soxs: Update to 5.0.1.
add 67f1d3faac gnu: python-jwst: Update to 1.20.2.
add d6b9b85df0 gnu: python-czml3: Update to 3.0.0.
add ad7580de94 gnu: Add python-pypeit.
add 64d05da7b1 gnu: python-specreduce: Update to 1.7.0.
add 0ff818bddc gnu: Add python-lsstdesc-coord.
add 10bd0e1e60 gnu: Add python-galsim.
add 8c4aee0388 gnu: Add python-romanisim.
add 1ae738c24a gnu: python-romancal: Update to 0.21.0.
add 7f15034d9e gnu: python-asdf-compression: Update to 0.1.0.
add 0b71833fa3 gnu: python-asdf-compression: Fix indentation.
add b1828a545a gnu: python-astroplan: Simplify package.
add ea5d98a0f3 gnu: python-fitsio: Update to 1.3.0.
add e5d5b63bb3 gnu: python-pyxsim: Update to 4.4.3.
add 6594e780f9 gnu: python-spisea: Update to 2.1.15.
add e135600f0e gnu: celestia-content: Update to 0.0.0-2.e707d64.
add ebc6de5f5d gnu: imppg: Update to 2.1.0.
add 22f7668008 gnu: phd2: Update to 2.6.13-2.7ed00ec.
add 888b41dbbf gnu: splash: Update to 3.11.6.
add 61396c638b gnu: tangos: Update to 1.10.0.
add 29327df985 gnu: tenmon: Update to 20251101.
add 02a6678052 gnu: uraniborg: Update to 0.0.14.
add 26e10e2541 gnu: Add python-astrodata.
add ec0ef475b5 gnu: Add python-astromartini.
add 017519b67e gnu: Add python-glue-geospatial.
add 470dd23942 gnu: Add python-rush.
add da5ce58900 gnu: Add python-represent.
add df333bc40a gnu: Add python-orbitalpy.
add 853501a25d gnu: Add python-spacetrack.
add bca183e092 gnu: gnuastro: Update to 0.24.
add fd11c1d5d9 doc: cookbook: Fix typo.
add 9436acc15c nls: Update translations.
new ee7cc6d82a gnu: linux-libre: Update to 6.17.9.
new fae64cdbf4 gnu: linux-libre 6.12: Update to 6.12.59.
new cf2e30b596 gnu: linux-libre 6.6: Update to 6.6.117.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (bead7ab82a)
\
N -- N -- N refs/heads/kernel-updates (cf2e30b596)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
.guix-authorizations | 2 +
Makefile.am | 1 -
doc/build.scm | 4 +-
doc/guix-cookbook.texi | 7 +-
doc/guix.texi | 4 +-
doc/htmlxref.cnf | 4 +-
doc/local.mk | 3 +-
etc/committer.scm.in | 33 +-
gnu/bootloader/grub.scm | 8 +
gnu/build/image.scm | 60 +-
gnu/local.mk | 7 +-
gnu/machine/hetzner.scm | 2 +-
gnu/packages/admin.scm | 10 +-
gnu/packages/algebra.scm | 8 +-
gnu/packages/astronomy.scm | 1699 +-
gnu/packages/audio.scm | 10 +-
.../aux-files/linux-libre/6.18-x86_64.conf | 12797 ----
gnu/packages/aux-files/run-in-namespace.c | 15 +-
gnu/packages/backup.scm | 32 -
gnu/packages/base.scm | 6 +
gnu/packages/bioconductor.scm | 3443 +-
gnu/packages/bioinformatics.scm | 306 +-
gnu/packages/bittorrent.scm | 3 +-
gnu/packages/books.scm | 38 +
gnu/packages/boost.scm | 91 +-
gnu/packages/build-tools.scm | 4 +-
gnu/packages/c.scm | 4 +-
gnu/packages/calendar.scm | 83 +-
gnu/packages/check.scm | 24 +-
gnu/packages/cmake.scm | 8 +-
gnu/packages/code.scm | 2 +-
gnu/packages/compression.scm | 19 +-
gnu/packages/cpp.scm | 61 +-
gnu/packages/cran.scm | 3984 +-
gnu/packages/crypto.scm | 4 +-
gnu/packages/databases.scm | 32 +-
gnu/packages/dbm.scm | 65 +-
gnu/packages/debug.scm | 44 +-
gnu/packages/{pikchr.scm => diagram.scm} | 36 +-
gnu/packages/disk.scm | 28 +-
gnu/packages/dns.scm | 4 +-
gnu/packages/duckdb.scm | 4 +-
gnu/packages/ebook.scm | 4 +-
gnu/packages/electronics.scm | 531 +-
gnu/packages/emacs-xyz.scm | 505 +-
gnu/packages/embedded.scm | 128 +-
gnu/packages/emulators.scm | 4 +-
gnu/packages/engineering.scm | 69 +-
gnu/packages/file-systems.scm | 55 +-
gnu/packages/finance.scm | 20 +-
gnu/packages/fonts.scm | 76 +-
gnu/packages/fontutils.scm | 210 +-
gnu/packages/fortran-xyz.scm | 73 +
gnu/packages/freedesktop.scm | 12 +-
gnu/packages/game-development.scm | 2 +-
gnu/packages/games.scm | 85 +-
gnu/packages/gcal.scm | 69 -
gnu/packages/geo.scm | 111 +-
gnu/packages/glib.scm | 2 +-
gnu/packages/gnome.scm | 2 +-
gnu/packages/gnucash.scm | 2 +-
gnu/packages/gnupg.scm | 9 -
gnu/packages/golang-build.scm | 110 +
gnu/packages/golang-check.scm | 147 +-
gnu/packages/golang-compression.scm | 33 +
gnu/packages/golang-crypto.scm | 49 +
gnu/packages/golang-maths.scm | 26 +
gnu/packages/golang-web.scm | 2293 +-
gnu/packages/golang-xyz.scm | 1326 +-
gnu/packages/graph.scm | 2 +-
gnu/packages/graphics.scm | 2 +-
gnu/packages/guile-xyz.scm | 28 +-
gnu/packages/hardware.scm | 8 +-
gnu/packages/i2p.scm | 2 +-
gnu/packages/image-processing.scm | 14 +-
gnu/packages/image-viewers.scm | 6 +-
gnu/packages/image.scm | 2 +-
gnu/packages/irc.scm | 6 +-
gnu/packages/java.scm | 12 +-
gnu/packages/javascript.scm | 8 +-
gnu/packages/jupyter.scm | 88 +-
gnu/packages/kde-graphics.scm | 2 +-
gnu/packages/kde-internet.scm | 26 -
gnu/packages/language.scm | 157 +-
gnu/packages/libreoffice.scm | 167 +-
gnu/packages/librewolf.scm | 12 +-
gnu/packages/libusb.scm | 206 +-
gnu/packages/license.scm | 80 +-
gnu/packages/linux.scm | 45 +-
gnu/packages/lisp-xyz.scm | 30 +
gnu/packages/machine-learning.scm | 33 +-
gnu/packages/mail.scm | 69 +-
gnu/packages/maths.scm | 162 +-
gnu/packages/medical.scm | 48 +-
gnu/packages/messaging.scm | 51 +-
gnu/packages/mpd.scm | 14 +-
gnu/packages/networking.scm | 45 +-
gnu/packages/nicotine.scm | 1 +
gnu/packages/ninja.scm | 4 +-
gnu/packages/nss.scm | 4 +-
gnu/packages/opencog.scm | 2 +-
gnu/packages/openkinect.scm | 10 +-
gnu/packages/package-management.scm | 6 +-
gnu/packages/parallel.scm | 33 +-
gnu/packages/password-utils.scm | 2 +-
gnu/packages/patches/amd-smi-python.patch | 101 +
.../emacs-elisp-autofmt-fix-region-send.patch | 50 +
.../python-piexif-fix-tests-with-pillow-7.2.patch | 66 +-
gnu/packages/patches/slurm-drmaa-25.patch | 29 +
.../patches/vlc-livemedia-2024.11.28.patch | 45 +
gnu/packages/perl-check.scm | 9 +-
gnu/packages/perl.scm | 52 +-
gnu/packages/photo.scm | 2 +-
gnu/packages/plotutils.scm | 2 +-
gnu/packages/poedit.scm | 2 +-
gnu/packages/pretty-print.scm | 2 +-
gnu/packages/prolog.scm | 4 +-
gnu/packages/pulseaudio.scm | 4 +-
gnu/packages/python-check.scm | 89 +-
gnu/packages/python-crypto.scm | 35 -
gnu/packages/python-science.scm | 130 +-
gnu/packages/python-web.scm | 50 +-
gnu/packages/python-xyz.scm | 1878 +-
gnu/packages/qt.scm | 53 +-
gnu/packages/radio.scm | 14 +-
gnu/packages/rdf.scm | 2 +-
gnu/packages/rocm.scm | 85 +-
gnu/packages/scanner.scm | 1 +
gnu/packages/scheme.scm | 5 +-
gnu/packages/serialization.scm | 54 +-
gnu/packages/simulation.scm | 349 +-
gnu/packages/specifications.scm | 109 +
gnu/packages/sphinx.scm | 287 +-
gnu/packages/spreadsheet.scm | 4 +-
gnu/packages/statistics.scm | 165 +-
gnu/packages/sycl.scm | 11 +-
gnu/packages/sync.scm | 176 +-
gnu/packages/telephony.scm | 2 +-
gnu/packages/terminals.scm | 33 +-
gnu/packages/text-editors.scm | 52 +
gnu/packages/textutils.scm | 6 +-
gnu/packages/tmux.scm | 4 +-
gnu/packages/tryton.scm | 77 +-
gnu/packages/valgrind.scm | 57 +-
gnu/packages/version-control.scm | 246 +-
gnu/packages/video.scm | 135 +-
gnu/packages/vim.scm | 24 -
gnu/packages/virtualization.scm | 5 +-
gnu/packages/vpn.scm | 63 -
gnu/packages/web-browsers.scm | 22 +-
gnu/packages/web.scm | 12 +-
gnu/packages/wm.scm | 140 +-
gnu/packages/xdisorg.scm | 110 +-
gnu/packages/xfce.scm | 4 +-
gnu/packages/xml.scm | 6 +-
gnu/packages/xorg.scm | 2 +
gnu/services/virtualization.scm | 7 +
gnu/system/examples/bare-hurd64.tmpl | 2 +-
gnu/system/examples/devel-hurd64.tmpl | 2 +-
gnu/system/image.scm | 38 +-
gnu/tests/foreign.scm | 19 +-
gnu/tests/guix.scm | 2 -
guix/build-system/r.scm | 2 +-
guix/build/cmake-build-system.scm | 6 +-
guix/graph.scm | 6 +-
guix/hg-download.scm | 2 +-
guix/import/cran.scm | 43 +-
guix/import/pypi.scm | 87 +-
guix/monad-repl.scm | 4 +-
guix/scripts/shell.scm | 22 +-
guix/svn-download.scm | 2 +-
guix/ui.scm | 4 +-
po/doc/guix-cookbook.de.po | 8 +-
po/doc/guix-cookbook.es.po | 8 +-
po/doc/guix-cookbook.fr.po | 8 +-
po/doc/guix-cookbook.it.po | 8 +-
po/doc/guix-cookbook.pt_BR.po | 8 +-
po/doc/guix-cookbook.ru.po | 8 +-
po/doc/guix-cookbook.sk.po | 8 +-
po/doc/guix-cookbook.sv.po | 10 +-
po/doc/guix-cookbook.ta.po | 821 +
po/doc/guix-cookbook.zh_CN.po | 10 +-
po/doc/guix-manual.de.po | 33 +-
po/doc/guix-manual.fr.po | 32 +-
po/doc/guix-manual.ru.po | 16 +-
po/doc/local.mk | 1 +
po/doc/po4a.cfg | 2 +-
po/guix/LINGUAS | 1 +
po/guix/fr.po | 105 +-
po/guix/nl.po | 473 +-
po/guix/pt.po | 25 +
po/guix/pt_BR.po | 131 +-
po/packages/LINGUAS | 1 +
po/packages/POTFILES.in | 3 +-
po/packages/ta.po | 70223 +++++++++++++++++++
tests/import/cran.scm | 24 +-
196 files changed, 86693 insertions(+), 20726 deletions(-)
delete mode 100644 gnu/packages/aux-files/linux-libre/6.18-x86_64.conf
rename gnu/packages/{pikchr.scm => diagram.scm} (66%)
delete mode 100644 gnu/packages/gcal.scm
create mode 100644 gnu/packages/patches/amd-smi-python.patch
create mode 100644
gnu/packages/patches/emacs-elisp-autofmt-fix-region-send.patch
create mode 100644 gnu/packages/patches/slurm-drmaa-25.patch
create mode 100644 gnu/packages/patches/vlc-livemedia-2024.11.28.patch
create mode 100644 po/doc/guix-cookbook.ta.po
create mode 100644 po/guix/pt.po
create mode 100644 po/packages/ta.po