guix_mirror_bot pushed a change to branch tex-team
in repository guix.
discard f08099057a gnu: texlive build system: Install info files and man pages.
discard a72f8684c3 gnu: Fix reproducibility for some TeX Live packages.
add 9afae09f1e gnu: xjobs: Update to 20250529.
add 88ce778dbf gnu: cryfs: Update to 1.0.1.
add 00885d3bcf gnu: Add emacs-winum.
add 4a0fa0bb4c gnu: python-sshfs: Update to 2025.11.0.
add f9ec32e906 gnu: hss: Update to 1.10.
add 45e4f8bf6c gnu: python-asyncssh: Update to 2.22.0.
add a61211c983 gnu: dropbear: Update to 2025.89.
add 396a6ce2da gnu: emacs-winum: Fix build.
add 52366256c4 gnu: qtwebengine: Enable vaapi.
add 3a44ef5472 gnu: shaderc-for-pcsx2: Remove.
add f25464b7d3 gnu: libpng-for-pcsx2: Rename package to libpng-next.
add a6b42e4a3b gnu: pcsx2-patches: Update to 2025.12.11-0.10239de.
add f98affddb4 gnu: pcsx2: Revise package.
add 6c0309adfa gnu: python-pyscroll: Update to 2.31-1.31e1c28.
add 54c880239d gnu: python-neteria: Switch to pyproject-build-system.
add 9c70ddf23e gnu: libxml++: Update to 5.6.0.
add 65f57fc74f gnu: stepmania: Fix compatibility with ffmpeg 8.
add 8aba80b2d0 gnu: oshu: Update to 2.0.3.
add 71c9ffd758 gnu: hyfetch: Update to 2.0.5.
add a63e421bdf gnu: sqlitestudio: Update to 3.4.19.
add 135ff24edb gnu: clifm: Update to 1.26.3.
add d14b1e9379 gnu: mu: Enable tests and readline.
add 145cd3e234 gnu: btop: Update to 1.4.6.
add 1154117b76 gnu: xfel: Update to 1.3.5.
add 70ea187904 gnu: fastfetch-minimal: Update to 2.56.1.
add 85099fdf98 gnu: fastfetch: Fix build.
add e9fcb744f9 gnu: nmrpflash: Update to 0.9.26.
add 3b058b76e2 gnu: debops: Update to 3.2.5.
add 38c5f32d31 gnu: solaar: Update to 1.1.18.
add 965082debe gnu: witr: Update to 0.1.7.
add ec0e7a2481 gnu: emacs-lobsters: Update to 1.2.
add 8699e8a946 gnu: emacs-closql: Update to 2.4.0.
add 7a787b90ce gnu: sbcl-hunchentoot: Update to 1.3.1.
add 47711ec8b1 gnu: emacs-gleam-mode: Update to 1.0.0.
add 7169d247bf gnu: onedrive: Update to 2.5.9.
add 486b322f3d gnu: freerdp: Update to 3.20.0.
add e5c2ab2a95 gnu: Add go-1.26.
add 1c5e70d28c gnu: python-userspacefs: Hardcode location of libfuse.
add db5061929e gnu: libgit2-1.5: Inherit from libgit2-1.7.
add 64b38c9b6f gnu: libgit2-1.6: Inherit from libgit2-1.7.
add ed5bc39621 gnu: libgit2-1.7: Inherit from libgit2-1.8.
add 2e3e470dd8 gnu: libgit2-1.8: Inherit from libgit2-1.9.
add 4018a13473 gnu: libgit2-1.3: Inherit from libgit2-1.5.
add 1e6ccfe65f gnu: Remove libgit2-1.4.
add 06a2b7bd97 system: operating-system-etc-service: Unset GUIX_PROFILE.
add ffb406eb4c scripts: package: Encourage unsetting GUIX_PROFILE.
add 178f556aa9 etc: guix-install.sh: Set XCURSOR_PATH to proper default
value.
add 95cae168cd gnu: bcachefs-static: Do not depend on %current-system in
toplevel.
add 8c9a1f9248 gnu: kwin: Skip failing tests on AArch64.
add 4d89580355 gnu: plasma-desktop: Skip failing test on AArch64.
add 25b63bc43b gnu: emacs-envrc: Update to 0.12-0.06d72d1.
add 06d72239c1 gnu: u-boot-tools: Fix cross-compilation.
add af7d018520 gnu: python-liblarch: Update to 3.2.0-0.fe06860.
add 8f940ef48d gnu: yt-dlp: Update to 2025.12.08.
add 35fee4fd2e build-system: cargo: Use the correct guile-json when
cross-compiling.
add c2b1128c7c gnu: emacs-org-node: Deprecate version 2.
add 8c34dfeec2 doc: Improve building from git instructions.
add f3a64d940b doc: Explain that some test require network when building
from git.
add 450e3f01f7 doc: Better explain extra development tools when building
from git.
add b670a1ed28 gnu: Add emacs-markov-text.
add eb48c7db26 gnu: Remove emacs-idris-mode.
add 1e9581caa3 gnu: Remove idris-wl-pprint.
add c0d1c2760d gnu: Remove idris-bifunctors.
add cee82b7fbf gnu: Remove idris-lens.
add f9e92222d9 gnu: Remove idris-lightyear.
add e89d3a0857 gnu: Remove idris.
add 6bd2a77b7b gnu: Remove (gnu packages idris).
add 61bba2ef6e gnu: Remove openshot.
add 18970fe4e3 gnu: Remove anki.
add 70498a4ade gnu: python-pyqtwebengine-6: Disinherit from
python-pyqtwebengine.
add 843719a57a gnu: Remove python-pyqtwebengine.
add d190f22813 gnu: Remove khmer.
add c3190a925c gnu: Remove florence.
add 03127eb11a gnu: Remove tuxmath.
add e09db4c8f3 gnu: Remove t4k-common.
add 191e59bc1c gnu: Remove easytag.
add d12619fa3b gnu: Remove akonadi-notes.
add e9d632640b gnu: Remove guile-fibers-1.0.
add 301255c5f8 gnu: Remove usage of (gnu packages idris).
add 497b81350a gnu: emacs-restclient: Update to 1.0-0.1800a4e.
add ae77366df7 gnu: Add emacs-org-supertag.
add c2ca6b7947 gnu: php: Update to 8.3.29.
add d4097d3563 gnu: icu4c-77: Apply Mozilla patches.
add b36f3b2810 Revert "gnu: icedove: Build with bundled ICU library to
resolve issues."
add 6371407bde gnu: Add luanti-chatcmdbuilder.
add 1c1407fe79 gnu: Add luanti-whitelist.
add 47af617b5c services: Add luanti-service-type.
add ba78d4d886 gnu: guile-dsv: Update to 0.9.0.
add 6913fd7018 gnu: python-sqlparse: Update to 0.5.5.
add 1502f231ff doc: Remove paragraph stating Xorg display server used by
default.
add 378f985a33 gnu: Add python-klayout.
add c93abddda8 gnu: Add python-liberty-parser.
add 0c39b751d2 gnu: Add lctime.
add 1adf50f5df gnu: Add python-hdlconvertorast.
add 5dca6d6643 gnu: Add python-hdlconvertor.
add ac92638bce services: Add opensnitch-service.
add 864605d5ea gnu: emacs-pdf-tools: Update to 1.3.0.
add 1db475f0a8 gnu: emacs-pdf-tools: Modernize.
add 9256d8ad94 gnu: Add python-customtkinter.
add 4aa418e1c6 gnu: Add koboldcpp.
add 08a2d845b7 .guix-authorizations: Update Hartmut's key.
add 004aedb98d gnu: java-commons-lang3: Update to 3.20.0.
add 690fd9e67b gnu: java-commons-text: Update to 1.15.0.
add c3bead1aba gnu: kodi: Fix build.
add 79e5728136 gnu: pijul: Add git integration.
add c98323de90 guix: lint: Add another package to the minimal variant list.
add e3f856a454 guix: lint: Check if minimal packages should be
native-inputs.
add 3adcd241fa gnu: debianutils: Use po4a-minimal.
add 91d340fe46 gnu: cpuinfo: Update to 0.0-6.b3b2596.
add 5840d7170a gnu: frei0r-plugins: Update source URI.
add 132d4690b9 gnu: spindle: Fix missing dependency.
add 108182dbb5 gnu: velvet: Adjust for GCC@14 and documentation building.
add b9724d5bf0 gnu: phyml: Add font required by documentation.
add a17221bb95 gnu: hh-suite: Adjust for GCC@14.
add 98f9df7ca0 gnu: emacs-lua-mode: 20221027-2.2f6b8d7.
add 3292fb35ba gnu: luanti: Update luanti-paths patch, per upstream
comments.
add f2027e216a gnu: emacs-xyz: Add emacs-nftables-mode.
add 041108bdbd gnu: Add emacs-helm-comint.
add c3311de1ab gnu: onetbb: Update to 2022.3.0.
add 0cc4cf3fe9 gnu: Add upstream-name to some java packages.
add e426045c09 gnu: Fix source-url for some java packages.
add b0e110f20e gnu: ericw-tools: Update to 0.18.2-rc1.
add 2edbd14468 gnu: Remove embree-2.
add 813bca41ed gnu: flatpak: Enable wayland security.
add 5f02ecf097 gnu: flatpak-kcm: Enable wayland.
add bb106f7b85 gnu: flexbar: Update to 3.5.0.
add a651926f55 services: configuration: Generalize 'list-of-packages?'
add 92ffbdd3cf ui: It’s 2026 now!
add d7ad785c6d ssh: Add 'none' to compression for dropbear compatibility.
add 211ee32c95 tests: %test-nss-mdns: Fix test order.
add cf2b740212 gnu: wofi: Update to 1.5.3
add 9b3b541660 gnu: diod: Update to 1.1.0
add 32fca2d366 services: radicale: add shepherd configuration action
add b73427bf6b tests: mail: Add Radicale test.
add 1cbba4f24f gnu: openpmix: Update to 6.0.0.
add 552ca46e7b gnu: openpmix: Simplify.
add 97c360a09c gnu: prrte: Fix compilation.
add c9f41f7202 gnu: elpa: Update to 2025.06.001.
add 32fb77bf65 gnu: Remove ecl-april.
add aa570c5312 gnu: onednn: Update to 3.10.2.
add b7b65c2a14 gnu: aqbanking: Update to 6.8.5.
add c2700f2c0b teams: ruby: Update file matching expression.
add 128940b683 gnu: emacs-varuga: Update to 0.2.0.
add 1b8f32221c gnu: emacs-magit: Update to 4.5.0.
add 47cdef9344 import: elpa: Fix glob->regexp conversion.
add cfbf8ac61c gnu: python-django-environ: Fix build.
add ad5059c951 gnu: python-bash-kernel: Fix propagated-inputs.
add 1d0ac19d81 gnu: python-jupyter-sphinx: Fix build.
add 13f0712bad gnu: gnucap: Fix build.
add 81c9dd8fa5 gnu: gnucap: Beautify package.
add 96547edc50 gnu: Move gnucap to electronics module.
add 2072dd77c3 gnu: electronics: Add gabber to copyright line.
add 54984217ae gnu: emacs-citeproc: Update to 0.9.4-0.a3d62ab.
add a10c8c93a3 gnu: kwin: Disable tests on all architectures.
add 13a0c2298b gnu: taglib: Update to 2.1.1.
add 796c26a1d4 gnu: strawberry: Update to 1.2.14.
add 9f95705df6 gnu: Add taglib-1.
add 736c2f5ac8 gnu: vlc: Fix build.
add c75dafdf4e gnu: emacs-ht: Update to 2.4-0.1c49aad.
add abd8c95ce6 gnu: openconnect: Update to 9.12-0-0dcdff8.
add 354787a4cf gnu: gnudatalanguage: Remove hdf4 from inputs.
add aa26f92659 gnu: Add phonon-qt5.
add be69e10d60 gnu: phonon: Build without Qt5.
add e4f22d9474 gnu: libapparmor: Update to 4.1.2.
add 4695d89ed2 gnu: xpra-5: Update to 5.1.4.
add 91499ad8b4 gnu: Remove python-fusepyng.
add 5d4aabea36 gnu: netcdf: Remove hdf4 input.
add 8747aaeb9c gnu: imv: Update to 5.0.1.
add 90f8250578 gnu: muon: Update to 0.5.0.
add 77f03bc60e gnu: zeal: Remove unreferenced Qt5 input.
add eecb10173b gnu: python-django: Update to 5.2.9 to fix CVEs.
add 09c4de0119 gnu: qtkeychain, qtkeychain-qt6: Update to 0.15.0.
add 78886e0b14 gnu: qxmpp: Update to 1.12.0.
add b8a60753a0 gnu: kaidan: Update to 0.13.0.
add 6c68c95f98 gnu: Add fusion.
add 4dd63bc979 gnu: emacs-lobsters: Update to 1.2.
add 8f42a7fa4b gnu: emacs-marginalia: Update to 2.6.
add 931afed162 gnu: emacs-cape: Update to 2.4.
add c7e661407c gnu: python-platypush: Update to 1.3.14.
add b3311ab56a gnu: webssh: Fix build.
add f264e62dce gnu: webssh: Update to 1.6.3.
add 97fb45ebba gnu: clustershell: Update to 1.9.3.
add d1f0cc1d00 gnu: gnumach: Don't truncate kernel messages.
add 25ed87459e gnu: hurd: Fix select for streamio.
add 3491ba4134 system: hurd: Switch to the Shepherd’s system log.
add c3e5a488af gnu: guix-modules: Update to 0.3.0.
add 30decb5a31 gnu: zint: Update to 2.16.0.
add 547e936b46 gnu: zint: Split Qt GUI into distinct zint-with-qt package.
add 2dde459d7c gnu: libunistring: Resurrect cross-build for MinGW.
add 2a2336209d git-authenticate, inferior: Autoload Git modules.
add 764de5aaaa describe: Define and use ‘modules-from-current-profile’.
add dd027a9847 gnu: texlive: Deprecate in favor of texlive-scheme-full.
add ca833e87aa gnu: xiphos: Refresh deprecated input.
add b9a2524cc8 gnu: asciinema: Update to 3.0.1.
add 47723c58f4 gnu: bmake: Update to 20251111.
add 04069c70ad gnu: bmake: Run tests in check phase.
add 97afa9e4d4 gnu: wget2: Update to 2.2.1.
add 7ffaa66996 gnu: ddrescue: Update to 1.30.
add 49fa9ff3d2 gnu: sage: Add missing standard inputs.
add 23a3e8697a gnu: libgit2-glib: Update to 1.2.1.
add d1c3c29b7f gnu: marble-qt: Rename to marble.
add d264d20d22 gnu: gpsd: Update to 3.27.3.
add 3a9d1ce077 gnu: gpsd: Switch to Qt6.
add b28e95b948 gnu: mkvtoolnix: Update to 97.0
add 4182d48407 gnu: pythonscad: Update to 0.8.4.
add 33748b415d gnu: pythonscad: Improve style.
add 7e59dfdd0c gnu: Add python-setuptools-79.
add e5dc92ad5b gnu: python-cython: Update to 3.1.7.
add 8805f1254a gnu: Add python-cython-next.
add 14103bfffa gnu: python-numpy: Set NumPy 2 as default.
add a61d9576d9 gnu: python-numpy-2: Deprecate by python-numpy.
add cfa74f8fe6 gnu: python-httptools: Update to 0.7.1.
add b6d9518eb9 gnu: python-matplotlib: Update to 3.10.8.
add d048dcb6c7 gnu: python-pandas: Update to 2.3.3.
add 412560b991 gnu: python-msgpack: Update to 1.1.2.
add 522e35507c gnu: python-scipy: Update to 1.16.3.
add 3405dfa5cf gnu: python-pytest-regressions: Update to 2.8.3.
add 01a0f864d6 gnu: python-pytest-regressions: Move to python-check.
add 343060ccb8 gnu: python-h5py: Update to 3.15.1.
add 9546bc3779 gnu: python-blosc: Adjust inputs.
add fac3d45ab2 gnu: python-setuptools-scm-next: Undeprecate.
add 282fc72219 gnu: python-dask: Update to 2025.11.0.
add 0d65e0d419 gnu: Add python-typing-inspection.
add 5506ee8edf gnu: Add python-pytest-run-parallel.
add a4ff6231bc gnu: python-pydantic-core: Update to 2.41.5.
add 3e30d520da gnu: python-pydantic: Update to 2.12.5.
add 27dea453a9 gnu: Add python-pydantic-1.
add cf9ae5db8a gnu: python-pydantic-2: Deprecate by python-pydantic.
add a208946bc1 gnu: python-nbval: Reduce closure size.
add 032757cda8 gnu: python-scikit-learn: Update to 1.7.2.
add 47e0c41547 gnu: python-distributed: Update to 2025.11.0.
add 512eed59c3 gnu: python-numexpr: Update to 2.14.1.
add 210d7913e5 gnu: python-ndindex: Update to 1.10.1.
add 152fa9bf7b gnu: c-blosc2: Update to 2.22.0.
add 5e3e037f61 gnu: python-blosc2: Update to 3.12.2.
add 2f3526cac1 gnu: netcdf: Update to 4.9.2.
add 8161d9e9a1 gnu: python-netcdf4: Update to 1.7.2.
add 0edfe9aa58 gnu: python-pydantic-settings: Update to 2.12.0.
add 664a01f881 gnu: python-casa-formats-io: Fix tests.
add bc52c66725 gnu: Add python-ulid.
add 07938aa170 gnu: Add python-cron-converter.
add ea6428ad5e gnu: Add python-annotated-doc.
add 5ad225d0d4 gnu: Add python-pydantic-extra-types.
add 1cc5a96a7f gnu: python-fastapi: Update to 0.124.0.
add 70bb278f99 gnu: python-astropy-6: Skip some tests.
add c0f24c0277 gnu: python-xmp-toolkit: Update to 2.1.0.
add d9e7d8ce2b gnu: python-django-ninja: Update to 1.5.1.
add 176c37adb7 gnu: python-dendropy: Update to 5.0.8.
add 5f5b55e925 gnu: python-algopy: Update to 0.7.2.
add c072b38d1d gnu: python-cloudpathlib: Fix tests.
add 37624b4037 gnu: python-stwcs: Remove relax-requirements phase.
add 17cc5cf118 gnu: python-astroml: Fix build.
add e2c2b189c5 gnu: python-guardpost: Update to 1.0.4.
add f54829d803 gnu: Add python-py3exiv2.
add eacd4a1472 gnu: didjvu: Update to 0.11.0.
add c9dbfc4783 gnu: python-blacksheep: Update to 2.4.5.
add e4cd7778e7 gnu: checkm: Update to 1.2.4.
add eb29a0256c gnu: blender: Use python-numpy@1.
add eb3e7ccd7f gnu: python-cesium: Update to 0.12.4.
add e0e013d516 gnu: python-ctapipe: Update to 0.28.0.
add 9af58b799f gnu: python-nox: Update to 2025.11.12.
add 04d5af4405 gnu: python-esutil: Fix build with gcc-14.
add 7f35ecb913 gnu: genetic: Use python-pynbody@2.
add e1f12940b9 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
add f70b64b16f gnu: python-gwcs: Remove relax-requirements phase.
add 72a75a1769 gnu: python-jwst: Remove relax-requirements phase.
add e558f3a33d gnu: python-astrodata: Use python-numpy@1.
add 15cf321300 gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
add 9f3bfe6ca2 gnu: python-scikit-image: Update to 0.25.2.
add 10cf7aea62 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
add 32d52d4c75 gnu: python-statmorph: Adjust inputs.
add 2ce2b02d33 gnu: python-jacobi: Fix tests.
add 96df824513 gnu: python-zodipy: Remove relax-requirements phase.
add 2234bb2ee9 gnu: python-kanon: Use python-numpy@1.
add 0519b8d90d gnu: python-linetools: Skip 2 tests.
add f220522986 gnu: cpat: Update to 3.0.5.
add 4e1cc0714d gnu: python-annoy: Add python-h5py.
add 02a3a0310f gnu: python-tables: Update to 3.10.2-0.aad9079.
add 8b9adc53e8 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
add 8d1d8c7fa3 gnu: python-llvmlite: Update to 0.45.0.
add 3b496bc5a1 gnu: python-numba: Update to 0.62.1.
add 984b4dc370 gnu: catch2: Update to 2.13.10.
add cf7349884d gnu: python-xarray: Update to 2025.12.0.
add 85f2cedb5d gnu: python-dask-image: Update to 2025.11.0.
add 9ce312bb3d gnu: python-reproject: Update to 0.19.0.
add 3c5cd67f72 gnu: python-spectral-cube: Update to 0.6.7.
add d82ce6eb11 gnu: python-xarray-einstats: Update to 0.9.1.
add eca3d2a9e1 gnu: python-naima: Update to 0.10.3.
add e8bf7a4cc0 gnu: python-arboreto: Update to 0.1.6-0.79f916b.
add a72b62ab8d gnu: python-arviz: Update to 0.22.0.
add 475effc8ae gnu: python-cleanlab: Fix build.
add 6707b6088c gnu: python-pyopengl: Skip one test.
add b35f3e28c6 gnu: python-modin: Update to 0.37.1.
add 7527c33bd3 gnu: python-jwcrypto: Adjust inputs.
add fee1fd356f gnu: websockify: Update to 0.13.0.
add b88adfea7d gnu: veusz: Update to 4.2.
add 31594d26ad gnu: python-seaborn: Skip 3 tests.
add 5da5f77740 gnu: python-glue-astronomy: Skip 3 tests.
add b2aa4f7136 gnu: Add python-lofar-parameterset.
add 340b05f1cd gnu: python-losoto: Update to 2.6.0.
add 0b0c486283 gnu: python-lofar-h5plot: Use python-numpy@1.
add 5df9f1fa6b gnu: python-meshio: Skip some tests.
add 71aef77fb3 gnu: python-numdifftools: Update to 0.9.42.
add 038af923a4 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
add c3857b2a54 gnu: python-kalepy: Skip 5 tests.
add 9a6e999953 gnu: python-regions: Update to 0.11.
add 2bdb3b6ac7 gnu: python-romancal: Remove relax-requirements phase.
add 5caa35461b gnu: python-hnswlib: Update to 0.8.0.
add e9a8099b61 gnu: python-loompy: Update to 3.0.8.
add 43be55484b gnu: urh: Use python-numpy@1.
add f5039827ec gnu: python-ase: Update to 3.26.0.
add d7aeb41cc9 gnu: python-asap3: Update to 3.13.10.
add f9d3419dcf gnu: python-specutils: Remove relax-requirements phase.
add 64279667e5 gnu: python-jmespath: Switch to pyproject.
add a011dd4789 gnu: python-stcal: Adjust relax-requirments phase.
add 90afe889d9 gnu: python-pytest-randomly: Update to 4.0.1.
add 374c4c2c5c gnu: python-pytest-randomly: Move to python-check.
add e2ab7b3a4b gnu: python-pytest-doctestplus: Update to 1.6.0.
add bfa3194a2e gnu: python-pythran: Clean up artifacts.
add 0c6b8221cf gnu: python-contourpy: Update to 1.3.3.
add bd69c257a5 gnu: python-ipython: Update to 9.8.0.
add fd27231b98 gnu: Add python-ipython-minimal.
add 7ceab0ff67 gnu: python-jupyter-core: Move to jupyter.
add 4b3a69c01e gnu: python-jupyter-core: Update to 5.9.1.
add d347a02023 gnu: python-jupyter-client: Simplfy bootstrapping.
add 9bb23e890e gnu: python-jupyter-client: Move to jupyter.
add a6b37ca86a gnu: Remove python-jupyter-console-minimal.
add b836b9c177 gnu: Add python-pytest-jupyter-minimal.
add 5259549d9e gnu: python-jupyter-client: Update to 8.7.0.
add a10fda636d gnu: python-ipykernel: Update to 7.1.0.
add 75749fbc66 gnu: python-jupyter-console: Update to 6.6.3.
add 723b3fb72f gnu: python-jupyter-console: Move to jupyter.
add 3f5a53102b gnu: Add python-jupyter-client-7.
add 7354c3c8d2 gnu: python-notebook: Fix build.
add 9845c02bfd gnu: python-pycollada: Update to 0.9.2.
add d58464c1c9 gnu: python-pynbody: Use python-ipython-minimal for tests.
add 65289e2cde gnu: crossmap: Update to 0.7.3.
add d944aa0615 gnu: python-awkward-cpp: Update to 47.
add 24c0fca821 gnu: python-awkward: Update to 2.8.5.
add cb48a3e656 gnu: python-anndata: Update to 0.12.7.
add afa0237c90 gnu: Add python-anndata-minimal.
add 672d2733b5 gnu: python-biom-format: Update to 2.1.17.
add 7bbc21b8b6 gnu: endgame-singularity: Update to 1.1.
add 943e719109 gnu: python-scikit-bio: Update to 0.7.1.post1.
add 03194effb4 gnu: Add python-diptest.
add a5f8080014 gnu: pyscenic: Add missing python-diptest.
add 9e2b50885c gnu: python-pandera: Update to 0.27.1.
add 1ccbfdce1d gnu: python-fbpca: Fix tests.
add ee0b054c82 gnu: python-biopython: Update to 1.86.
add b85537291c gnu: python-statsmodels: Update to 0.14.5.
add f1258248c8 gnu: python-scanpy: Update to 1.11.5.
add 313bd251fb gnu: python-circe: Update to 0.3.9.
add 88a0b7db3b gnu: python-cooler: Update to 0.10.4.
add 32ce8fee2d gnu: python-coolbox: Update to 0.3.9.
add 335dae9210 gnu: htseq: Update to 2.0.9.
add 632cf16c9d gnu: python-vaex-core: Update to 4.19.0.
add 346c3ed2ee gnu: python-jupyterlab-widgets: Update to 3.0.12.
add cc6bc800e4 gnu: python-ipywidgets: Update to 8.1.4.
add e1bb2f3ba8 gnu: Add python-array-api-strict.
add d20900eda1 gnu: python-plotly: Update to 5.24.1.
add 2837d27d17 gnu: python-pyudev: Update to 0.24.4.
add e7f938e2e0 gnu: python-numpoly: Update to 1.3.4.
add 392fa1b1e5 gnu: python-chaospy: Update to 4.3.21.
add 9ec97f3257 gnu: tangos: Update to 1.11.0.
add ecf1029360 gnu: Remove python-eventio-1.
add b91891b0ec gnu: Add qdldl.
add fd806a41cf gnu: Add osqp.
add f615e1fcd7 gnu: python-osqp: Update to 1.0.5.
add 012c5a70fa gnu: Add scs.
add c243392b15 gnu: python-scs: Update to 3.2.10.
add 496ccd42ba gnu: python-cvxpy: Update to 1.7.5.
add 110924d1bb gnu: python-fastcluster: Update to 1.3.0.
add 4c97b39204 gnu: Add python-lsprotocol.
add 9da0d44c9b gnu: Add python-pygls.
add 2ad05a6e3d gnu: python-crosshair: Update to 0.0.101.
add 824c19fbef gnu: python-metacells: Simplify.
add 17d47c6dba gnu: python-verde: Update to 1.8.1.
add a5e1770504 gnu: Add python-pyunlocbox.
add 6bf88967a5 gnu: python-pygsp: Update to 0.6.0.
add f3342fbed4 gnu: python-graphtools: Update to 2.1.0.
add 21a0e87ec4 gnu: python-fcsparser: Use python-numpy@1.
add 303e2a21c3 gnu: Add python-scprep.
add be4197fabf gnu: python-magic-impute: Update to 3.0.0.
add 5540ea106d gnu: python-cooltools: Update to 0.7.1.
add c325c7a68a gnu: python-cnmf: Update to 1.7.0.
add 8c68ab0ebf gnu: idr: Fix build.
add fce38e0876 gnu: mageck: Use python-numpy@1.
add 36fc8d9b0f gnu: python-captum: Update to 0.8.0-0.4fade3a.
add b80ffc8b61 gnu: python-cellbender: Update to 0.3.2.
add ba162af2ad gnu: macs-3: Update to 3.0.3.
add 71325a21fb gnu: python-brian2: Update to 2.10.1.
add 89df7b006b gnu: python-presto: Improve package, fix tests.
add 6dfc2aa58d gnu: Add python-apricot-select.
add 7eda59a972 gnu: python-pomegranate: Update to 1.1.0.
add 910886d390 gnu: python-pomegranate: Move to machine-learning.
add f9e531ba4a gnu: python-pyfaidx: Update to 0.9.0.3.
add 95b8189000 gnu: cnvkit: Update to 0.9.12-0.52f367b.
add 20993d0f42 gnu: piglit: Use python-numpy@1.
add c877c31471 gnu: python-tdda: Skip one more test.
add 9d2428e513 gnu: python-deepdish: Use python-numpy@1.
add af91e77063 gnu: python-deeptools: Update to 3.5.6.
add 58469f17aa gnu: python-funsor: Update to 0.4.6.
add c86041dfae gnu: python-mygene: Switch to pyproject.
add 70288c60fa gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
add 73e5552a10 gnu: Add python-stregion.
add f29cb36b42 gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
add ed10910297 gnu: python-gizmo-analysis: Remove relax-requirements phase.
add d9bf8a2803 gnu: python-sep: Remove relax-requirements phase.
add dd97d3bf25 gnu: python-sncosmo: Adjust phases.
add ba1aacf549 gnu: python-specreduce: Remove relax-requirements phase.
add 102cd591e8 gnu: python-utilities-awetzel: Remove relax-requirements
phase.
add 217d9fcb73 gnu: python-episcanpy: Use python-numpy@1.
add 98613f8d8c gnu: python-fenics-ufl-2019: Use python-numpy@1.
add 37612102e5 gnu: python-fenics-ffc: Use python-numpy@1.
add 6c4d7d55d9 gnu: Add python-xarray-dataclass.
add 7b174aac00 gnu: python-multiscale-spatial-image: Update to 2.0.3.
add 1efc54a5e1 gnu: Remove python-xarray-datatree.
add c8c5d917bd gnu: python-glue-qt: Relax requirements for ipython version.
add 6c652aa903 gnu: python-papermill: Reduce closure size; skip 2 tests.
add 3a0d52d222 gnu: python-vector: Update to 1.7.0.
add 7c0cb88507 gnu: python-scikit-learn-1.6: Skip 3 more tests.
add b28f64f097 gnu: boost-numpy: Use python-numpy@1.
add f46d956162 gnu: rdkit: Use python-numpy@1.
add a7b2cbfdba gnu: python-paramz: Use python-numpy@1.
add 02578b1ca9 gnu: python-gpy: Use python-numpy@1.
add 42c6ca0aa1 gnu: python-paramz Move to machinve-learning.
add bbc8b9a5d0 gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3.
add 01b25928b3 gnu: python-spisea: Use python-numpy@1.
add e4fff43657 gnu: python-scikit-surprise: Use python-numpy@1.
add e0a9dfcb8a gnu: Add python-statannotations.
add 6cf4623475 gnu: dolphin-emu: Use python-numpy@1.
add 238b6ecb31 gnu: coda: Use python-numpy@1.
add 3eb1bd31bf gnu: python-dcor: Use python-numpy@1.
add 1642226fae gnu: python-hdf5storage: Use pythno-numpy@1.
add 35495dd761 gnu: python-hic2cool: Fix tests.
add 9cc0baa99b gnu: scvelo: Update to 0.3.3.
add d7dcdbe9f5 gnu: python-sbpy: Skip one doc test.
add 4c642d8544 gnu: pigx-scrnaseq: Use python-numpy@1.
add b152b37d95 gnu: python-hicmatrix: Update to 17.2.
add 43a8d978f3 gnu: python-pygenometracks: Update to 3.9.
add c89bb1b656 gnu: python-pyamg: Update to 5.3.0.
add b8f1e5a2da gnu: python-muon: Use python-numpy@1.
add d1a7fe5d6b gnu: python-salib: Update to 1.5.2.
add b62f311dc9 gnu: python-pyfma: Use python-numpy@1.
add 25d291e925 gnu: python-accupy: Use python-numpy@1.
add d8fcf534c1 gnu: python-quadpy: Use python-numpy@1.
add d261a043cb gnu: python-imagecodecs: Fix build.
add 1f1e78a86e gnu: python-libneuroml: Update to 0.6.7.
add 0c979a75c9 gnu: python-watchfiles: Update to 1.1.1.
add ef180607fc gnu: Add python-narwhals-minimal.
add d05d13d330 gnu: python-narwhals: Update to 2.15.0.
add 755807f6cd gnu: python-pyreadstat: Update to 1.3.2.
add 13546c6a7b gnu: python-pypika-tortoise: Update to 0.6.3.
add 79cffc5115 gnu: python-tortoise-orm: Update to 0.25.3.
add 90ad2ec0ec gnu: python-hyperopt: Fix build.
add 366ab5c36c gnu: python-iced: Update to 0.6.0.
add 9bdc2d33f5 gnu: python-decoupler: Update to 2.1.2.
add cbe7ccf99c gnu: python-liana-py: Update to 1.6.1.
add b576b5ed66 gnu: python-pandas-stubs: Update to 2.3.3.251219.
add 805061635b gnu: python-pytoolconfig: Reduce closure size.
add 9a049d170b gnu: python-lifelines: Simplify tests.
add 3b36abc018 gnu: python-pysm3: Relax requirements for NumPy and SciPy.
add 6f309cae9e gnu: python-mathics-core: Use python-numpy@1.
add bf9a6c0627 gnu: python-metpy: Update to 1.7.1.
add 189a4a1038 gnu: python-numpysane: Use python-numpy@1.
add 5631c76c7f gnu: python-orthopy: Use python-numpy@1.
add 6f384b5df3 gnu: Add python-uuid6.
add 8cb4542770 gnu: python-deepdiff: Update to 8.6.1.
add 49843ae362 gnu: python-pandapower: Update to 3.3.0.
add 5c147a26c7 gnu: python-peaks2utr: Use python-numpy@1.
add 764f5f950e gnu: python-perfplot: Use python-numpy@1.
add 230fd197f1 gnu: Remove python-statannot.
add 7c22b11ff6 gnu: Remove python-watchgod.
add fec4fedc59 gnu: Remove python-webbpsf.
add dc7b59dd2e gnu: Remove ginga-qt5.
add 0735bf2770 gnu: Remove fanc.
add 47414b9580 gnu: openmm: Update to 8.4.0.
add 9f7f0fba5e gnu: Remove python-dask-expr.
add 868cc3453a gnu: python-scikit-survival: Update to 0.26.0.
add 14b22b9bf3 gnu: python-scikit-survival: Fix indentation.
add 5c7b9c43ca gnu: python-phenograph: Fix tests.
add 5dc4ec4e5e gnu: python-pingouin: Fix tests.
add 82b02761ba gnu: python-pot: Update to 0.9.6.post1.
add 4a3c1e4e13 gnu: python-pyemd: Use python-numpy@1.
add d8ce5200e0 gnu: python-pygam: Update to 0.12.0.
add dc42cbcbe5 gnu: python-fastparquet: Update to 2025.12.0.
add a7e6ee5423 gnu: python-pytensor: Update to 2.36.3.
add f372e3146b gnu: python-pymc: Update to 5.27.0.
add 5f4a066413 gnu: openmm: Remove shaky tests.
add 5a37bcc1b3 gnu: python-pymol: Use python-numpy@1.
add 3d087a7084 gnu: Add c-stdaux.
add 694ef35cda gnu: Add c-siphash.
add a5e8dabd2a gnu: Add python-siphash24.
add 2ed64dce31 gnu: python-pytools: Add missing propagated inputs, enable
tests.
add 9f72190909 gnu: python-nanobind: Update to 2.10.2.
add d66a0a0fdf gnu: python-pyopencl: Update to 2026.1.
add 84da5c20d3 gnu: python-pysat: Skip more tests.
add bb265d173a gnu: python-statmorph: Use python-numpy@1.
add 372824cd01 gnu: python-petrofit: Reduce closure size.
add 64a7453ddb gnu: python-qutip: Update to 5.2.2.
add aa6e291915 gnu: Remove music21.
add 95cf78692f gnu: python-cylp: Update to 0.94.0.
add 4fda0bc2af gnu: python-timezonefinder: Use python-numpy@1.
add 78247dc490 gnu: python-mysql-connector-python: Skip one more test.
add 51245d39c9 gnu: python-genomepy: Update to 0.16.3.
add f57631497e gnu: Remove python-aioredis.
add abb6134c03 gnu: Remove python-pynbody-1.
add 934402149f gnu: python-sphinx-autodoc-typehints: Update to 2.3.0.
add 83b6ae8a05 gnu: python-coolbox: Fix inputs.
add 4f5ccd4dc8 gnu: scregseg: Skip 'sanity-check phase.
add e84e23ad7e gnu: python-drep: Skip additional test.
add 8d188eae5f gnu: python-pgmpy: Ignore flaky tests.
add c11aba039c gnu: python-pyts: Update to 0.13.0-0.4f3d97b.
add 2cc14c3cad gnu: python-pyvista: Ignore failing test.
add 813ddcd8c7 gnu: python-daemon: Replace python-lockfile by
python-filelock.
add 7d0182f72b gnu: python-cachecontrol: Remove python-lockfile
propagated-input.
add 11d240819b gnu: duplicity: Remove python-lockfile propagated-input.
add 9b6c0108c4 build-system: python: Accept pyproject
package-with-explicit-python.
add 459f01b408 gnu: python2-pycparser: Migrate to pyproject and decouple.
add b3b52ed417 gnu: python2-cffi: Migrate to pyproject and decouple.
add cc9fe11aa1 gnu: python2-cffi: Move to (gnu packages pypy).
add a6b64b0ac4 gnu: python2-pycparser: Move to (gnu packages pypy).
add 775e65f719 gnu: kapidox: Switch to pyproject.
add 44a8b771a8 gnu: xpra: Switch to pyproject.
add b59071136f gnu: qspectrumanalyzer: Switch to pyproject.
add 7fa052e292 gnu: pass-rotate: Switch to pyproject.
add fbe435f216 gnu: sonata: Switch to pyproject.
add 4fe1937f79 gnu: jupyter: Switch to pyproject.
add 5a89fbb634 gnu: python-ipydatawidgets: Switch to pyproject.
add 6254179435 gnu: fp16: Switch to pyproject.
add f0a899bd86 gnu: quodlibet: Switch to pyproject.
add 49a2cf0f2d gnu: z3: Switch to pyproject.
add 217fb1d9df gnu: python-django-allauth: Update to 65.13.1.
add d2b0e19124 gnu: httpd: Update to 2.4.66.
add 5c077916d0 gnu: bitcoin-core: Update to 30.2.
new 5dfd67b445 gnu: Fix reproducibility for some TeX Live packages.
new d3cb52dad4 gnu: texlive build system: Install info files and man pages.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (f08099057a)
\
N -- N -- N refs/heads/tex-team (d3cb52dad4)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
.guix-authorizations | 2 +-
CODEOWNERS | 4 +-
doc/contributing.texi | 12 +-
doc/guix.texi | 239 +-
etc/guix-install.sh | 2 +-
etc/teams.scm | 4 +-
gnu/bootloader.scm | 11 +-
gnu/home/services/sway.scm | 3 -
gnu/local.mk | 25 +-
gnu/packages/accessibility.scm | 44 -
gnu/packages/admin.scm | 162 +-
gnu/packages/aidc.scm | 45 +-
gnu/packages/algebra.scm | 2 +-
gnu/packages/apparmor.scm | 5 +-
gnu/packages/astronomy.scm | 780 +++---
gnu/packages/backup.scm | 2 +-
gnu/packages/bioinformatics.scm | 1560 ++++++-----
gnu/packages/books.scm | 3 +-
gnu/packages/boost.scm | 2 +-
gnu/packages/bootloaders.scm | 10 +-
gnu/packages/build-tools.scm | 139 +-
gnu/packages/c.scm | 54 +
gnu/packages/check.scm | 73 +-
gnu/packages/chemistry.scm | 4 +-
gnu/packages/clifm.scm | 4 +-
gnu/packages/compression.scm | 4 +-
gnu/packages/crypto.scm | 52 +-
gnu/packages/cybersecurity.scm | 2 +-
gnu/packages/data-language.scm | 6 +-
gnu/packages/databases.scm | 113 +-
gnu/packages/debian.scm | 4 +-
gnu/packages/disk.scm | 4 +-
gnu/packages/django.scm | 35 +-
gnu/packages/djvu.scm | 47 +-
gnu/packages/documentation.scm | 1 -
gnu/packages/education.scm | 225 --
gnu/packages/electronics.scm | 332 +++
gnu/packages/emacs-xyz.scm | 642 +++--
gnu/packages/emulators.scm | 152 +-
gnu/packages/engineering.scm | 257 +-
gnu/packages/file-systems.scm | 32 +-
gnu/packages/finance.scm | 12 +-
gnu/packages/fusion.scm | 96 +
gnu/packages/game-development.scm | 51 +-
gnu/packages/games.scm | 26 +-
gnu/packages/geo.scm | 59 +-
gnu/packages/gl.scm | 2 +-
gnu/packages/gnome.scm | 45 +-
gnu/packages/gnucash.scm | 4 +-
gnu/packages/gnuzilla.scm | 8 +-
gnu/packages/golang.scm | 32 +
gnu/packages/gps.scm | 9 +-
gnu/packages/graph.scm | 117 +-
gnu/packages/graphics.scm | 26 +-
gnu/packages/guile-xyz.scm | 59 +-
gnu/packages/hurd.scm | 4 +-
gnu/packages/icu4c.scm | 27 +-
gnu/packages/idris.scm | 283 --
gnu/packages/image-viewers.scm | 7 +-
gnu/packages/image.scm | 4 +-
gnu/packages/java.scm | 21 +-
gnu/packages/jupyter.scm | 359 ++-
gnu/packages/kde-education.scm | 7 +-
gnu/packages/kde-frameworks.scm | 15 +-
gnu/packages/kde-graphics.scm | 2 +-
gnu/packages/kde-internet.scm | 10 +-
gnu/packages/kde-multimedia.scm | 24 +-
gnu/packages/kde-pim.scm | 26 -
gnu/packages/kde-plasma.scm | 17 +-
gnu/packages/kodi.scm | 8 +-
gnu/packages/libffi.scm | 22 +-
gnu/packages/libunistring.scm | 13 +-
gnu/packages/lisp-xyz.scm | 71 +-
gnu/packages/llvm.scm | 42 +-
gnu/packages/luanti.scm | 49 +
gnu/packages/machine-learning.scm | 625 ++++-
gnu/packages/mail.scm | 4 +-
gnu/packages/maths.scm | 529 ++--
gnu/packages/mp3.scm | 35 +-
gnu/packages/mpd.scm | 36 +-
gnu/packages/music.scm | 176 +-
gnu/packages/oneapi.scm | 8 +-
gnu/packages/opencl.scm | 46 +-
gnu/packages/package-management.scm | 8 +-
gnu/packages/parallel.scm | 102 +-
gnu/packages/password-utils.scm | 11 +-
gnu/packages/patches/anki-mpv-args.patch | 42 -
.../patches/bmake-run-check-separately.patch | 26 +
gnu/packages/patches/cryfs-boost-1.88-fix.patch | 32 +
gnu/packages/patches/cryfs-boost-1.89-fix.patch | 22 +
gnu/packages/patches/freerdp-3.16.0-rpath.patch | 21 -
gnu/packages/patches/gnumach-kmsg-overflow.patch | 59 +
.../guile-fibers-destroy-peer-schedulers.patch | 24 -
gnu/packages/patches/hurd-streamio-select.patch | 88 +
.../icu4c-20548-dateinterval-timezone.patch | 165 ++
...=> icu4c-22132-standardize-vtzone-output.patch} | 13 +-
.../icu4c-23069-rosh-hashanah-postponement.patch | 26 +
.../icu4c-dayperiod-fractional-seconds.patch | 25 +
gnu/packages/patches/icu4c-double-conversion.patch | 200 ++
.../patches/icu4c-dtitvfmt-adopt-calendar.patch | 71 +
gnu/packages/patches/icu4c-wasi-workaround.patch | 802 ++++++
gnu/packages/patches/idris-test-ffi008.patch | 26 -
.../patches/java-commons-lang-fix-dependency.patch | 38 -
gnu/packages/patches/luanti-paths.patch | 72 +-
.../patches/python-daemon-relax-lockfile.patch | 249 ++
...ython-matplotlib-fix-legend-loc-best-test.patch | 84 -
.../patches/python-pyreadstat-link-libiconv.patch | 7 +-
gnu/packages/patches/python-scipy-i686.patch | 49 -
...ython-xmp-toolkit-add-missing-error-codes.patch | 51 -
.../patches/shaderc-for-pcsx2-changes.patch | 543 ----
gnu/packages/patches/stepmania-ffmpeg-compat.patch | 47 +-
gnu/packages/php.scm | 4 +-
gnu/packages/plan9.scm | 77 +-
gnu/packages/protobuf.scm | 2 +-
gnu/packages/pypy.scm | 84 +-
gnu/packages/python-build.scm | 26 +-
gnu/packages/python-check.scm | 217 +-
gnu/packages/python-compression.scm | 43 +-
gnu/packages/python-graphics.scm | 35 +-
gnu/packages/python-science.scm | 2411 ++++++++---------
gnu/packages/python-web.scm | 124 +-
gnu/packages/python-xyz.scm | 1897 +++++++------
gnu/packages/qt.scm | 77 +-
gnu/packages/radio.scm | 29 +-
gnu/packages/rdesktop.scm | 14 +-
gnu/packages/rust-crates.scm | 2824 +++++++++++---------
gnu/packages/sagemath.scm | 11 +
gnu/packages/simulation.scm | 37 +-
gnu/packages/sphinx.scm | 52 +-
gnu/packages/ssh.scm | 40 +-
gnu/packages/statistics.scm | 370 ++-
gnu/packages/sync.scm | 18 +-
gnu/packages/terminals.scm | 26 +-
gnu/packages/texlive.scm | 403 +--
gnu/packages/time.scm | 4 +-
gnu/packages/version-control.scm | 167 +-
gnu/packages/video.scm | 84 +-
gnu/packages/vpn.scm | 82 +-
gnu/packages/vulkan.scm | 16 -
gnu/packages/web.scm | 32 +-
gnu/packages/wget.scm | 4 +-
gnu/packages/xdisorg.scm | 6 +-
gnu/packages/xorg.scm | 40 +-
gnu/services/configuration.scm | 5 +-
gnu/services/games.scm | 215 +-
gnu/services/mail.scm | 10 +-
gnu/services/opensnitch.scm | 230 ++
gnu/system.scm | 3 +
gnu/system/hurd.scm | 4 +-
gnu/system/image.scm | 23 +-
gnu/tests/avahi.scm | 27 +-
gnu/tests/games.scm | 108 +
gnu/tests/mail.scm | 68 +-
gnu/tests/security.scm | 88 +-
guix/build-system/cargo.scm | 2 +-
guix/build-system/python.scm | 5 +-
guix/describe.scm | 22 +
guix/git-authenticate.scm | 25 +-
guix/import/elpa.scm | 2 +-
guix/import/utils.scm | 9 +-
guix/inferior.scm | 2 +-
guix/lint.scm | 11 +-
guix/platform.scm | 7 +-
guix/scripts/package.scm | 1 +
guix/ssh.scm | 2 +-
guix/ui.scm | 4 +-
guix/upstream.scm | 9 +-
po/doc/guix-manual.de.po | 3 -
po/doc/guix-manual.fr.po | 3 -
po/packages/POTFILES.in | 1 -
170 files changed, 12199 insertions(+), 8964 deletions(-)
create mode 100644 gnu/packages/fusion.scm
delete mode 100644 gnu/packages/idris.scm
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gnu/packages/patches/guile-fibers-destroy-peer-schedulers.patch
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copy gnu/packages/patches/{icu4c-icu-22132-fix-vtimezone.patch =>
icu4c-22132-standardize-vtzone-output.patch} (72%)
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gnu/packages/patches/icu4c-23069-rosh-hashanah-postponement.patch
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gnu/packages/patches/icu4c-dayperiod-fractional-seconds.patch
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