guix_mirror_bot pushed a change to branch r-team
in repository guix.

 discard 007a2e2cd1 gnu: r-tidyr: Update to 1.3.2.
 discard 6e60df8a57 gnu: r-rcpparmadillo: Update to 15.2.3-1.
 discard c4e36ad34c gnu: r-tibble: Update to 3.3.1.
 discard 1e5cb79ff0 gnu: r-rlang: Update to 1.1.7.
 discard 3c0f4adb05 gnu: r-tesseract: Update to 5.2.4.
 discard 753aa105db gnu: r-vgam: Update to 1.1-14.
 discard 7585b129ab gnu: r-delaporte: Update to 8.4.3.
 discard 060feda403 gnu: r-stars: Update to 0.7-0.
 discard 53cd69f324 gnu: r-highlight: Update to 0.5.2.
 discard 3345f1d78b gnu: r-mlr3tuning: Update to 1.5.1.
 discard 90f75c5127 gnu: r-mlr3learners: Update to 0.14.0.
 discard a35c366be3 gnu: r-mlr3: Update to 1.3.0.
 discard 1497662277 gnu: r-seurat: Update to 5.4.0.
 discard 5bacae2f8d gnu: r-seuratobject: Update to 5.3.0.
 discard fc9a14bd31 gnu: r-qtl: Update to 1.74.
 discard 01df9fdbff gnu: r-lsa: Update to 0.73.4.
 discard cd0fcbfa4d gnu: r-infer: Update to 1.1.0.
 discard e35fb628ce gnu: r-parsnip: Update to 1.4.1.
 discard fa410ab57f gnu: r-tidypredict: Update to 1.0.1.
 discard b5278cf2bf gnu: r-nanoarrow: Update to 0.7.0-2.
 discard 12efb405da gnu: r-clusterr: Update to 1.3.6.
 discard 60b1ba418b gnu: r-spatstat-utils: Update to 3.2-1.
 discard e69f3d2cfb gnu: r-shapforxgboost: Update to 0.2.0.
 discard e6c930d163 gnu: r-projpred: Update to 2.10.0.
 discard 845f474d5e gnu: r-kendall: Update to 2.2.2.
 discard c764364591 gnu: r-rstantools: Update to 2.6.0.
 discard 6981cce68a gnu: r-rsconnect: Update to 1.7.0.
 discard d99e2dc123 gnu: r-butcher: Update to 0.4.0.
 discard 6209099bca gnu: r-polycor: Update to 0.8-2.
 discard de7c6e9266 gnu: r-forecast: Update to 9.0.0.
 discard 7a9e64e23c gnu: r-knn-covertree: Update to 1.1.
 discard eeed32f7aa gnu: r-anthropometry: Update to 1.21.
 discard 1f2a946137 gnu: r-imager: Update to 1.0.8.
 discard 6f2830e59c gnu: r-hdrcde: Update to 3.5.0.
 discard a68592f1f7 gnu: r-r-devices: Update to 2.17.3.
 discard e525d2be55 gnu: r-lifecycle: Update to 1.0.5.
 discard 0b54efa182 gnu: r-terra: Update to 1.8-93.
 discard b2aa8b04f7 gnu: r-leidenbase: Update to 0.1.36.
 discard 85337b49a1 gnu: r-blme: Update to 1.0-7.
 discard a4263fc5bc gnu: r-sctransform: Update to 0.4.3.
 discard 81ea5a763f gnu: r-arrow: Update to 22.0.0.1.
 discard 07ba5fcb9c gnu: r-gggenes: Update to 0.6.0.
 discard 0fbc7e290e gnu: r-bookdown: Update to 0.46.
 discard 2dec8fe9c5 gnu: r-bqtl: Update to 1.0-39.
 discard f806a1904b gnu: r-pegas: Update to 1.4.
 discard 13b3adc43f gnu: r-lavaan: Update to 0.6-21.
 discard 3eb890a78e gnu: r-msir: Update to 1.4.
 discard 2c2ea93168 gnu: r-testit: Update to 0.15.
 discard 543eb947af gnu: r-shinybs: Update to 0.63.0.
 discard 3aa978a974 gnu: r-future-apply: Update to 1.20.1.
 discard 0f7d11bb3b gnu: r-spam: Update to 2.11-3.
 discard 4a3a203a4b gnu: r-gmisc: Update to 3.1.0.
 discard 20822516ad gnu: r-rncl: Update to 0.8.8.
 discard 14b34d9ff4 gnu: r-sparsevctrs: Update to 0.3.5.
 discard 473ee354ff gnu: r-tidytree: Update to 0.4.7.
 discard b5c1a36c1c gnu: r-tm: Update to 0.7-17.
 discard 9fe6540eca gnu: r-fmesher: Update to 0.6.1.
 discard f4c194583f gnu: r-afex: Update to 1.5-1.
 discard d0f5e85a21 gnu: r-mvabund: Update to 4.2.8.
 discard d358932eff gnu: r-gert: Update to 2.3.1.
 discard 313eb50015 gnu: r-ggeffects: Update to 2.3.2.
 discard 77ffde0f9d gnu: r-tmb: Update to 1.9.19.
 discard bb6f172ce8 gnu: r-bayesplot: Update to 1.15.0.
 discard 205234da3b gnu: r-emmeans: Update to 2.0.1.
 discard ff50d41e87 gnu: r-svdialogs: Update to 1.1.2.
 discard 313d906561 gnu: r-dofuture: Update to 1.1.3.
 discard bbcfe79855 gnu: r-superlearner: Update to 2.0-40.
 discard 9ae4e36516 gnu: r-gam: Update to 1.22-7.
 discard c8070c06a3 gnu: r-abcrf: Update to 2.0.
 discard a09e938a9e gnu: r-nodbi: Update to 0.14.0.
 discard 02311be051 gnu: r-insight: Update to 1.4.4.
 discard 07005b54fa gnu: r-officer: Update to 0.7.2.
 discard 32d15780ea gnu: r-pupillometryr: Update to 0.0.7.
 discard f322140d77 gnu: r-itsadug: Update to 2.5.
 discard 233bc36522 gnu: r-ggsci: Update to 4.2.0.
 discard e76f441b86 gnu: r-ggseqlogo: Update to 0.2.2.
 discard 213d265f10 gnu: r-fsa: Update to 0.10.1.
 discard 8ea34fb801 gnu: r-arules: Update to 1.7.13.
 discard 640356c183 gnu: r-simdesign: Update to 2.22.
 discard c7a80f85c5 gnu: r-fbasics: Update to 4052.98.
 discard 05e23e3bf9 gnu: r-tseries: Update to 0.10-59.
 discard 58df911f48 gnu: r-statnet-common: Update to 4.13.0.
 discard 87d27e961d gnu: r-nanoparquet: Update to 0.4.3.
 discard c9bb0038b7 gnu: r-venndiagram: Update to 1.8.2.
 discard 06e1524830 gnu: r-trycatchlog: Update to 1.3.3.
 discard 397bd21ea8 gnu: r-mice: Update to 3.19.0.
 discard f6493fb794 gnu: r-ordinal: Update to 2025.12-29.
 discard c03fb5c25f gnu: r-statsexpressions: Update to 1.7.2.
 discard b693f97ae1 gnu: r-broom: Update to 1.0.11.
 discard 4de46a137b gnu: r-knitrbootstrap: Update to 1.0.4.
 discard cc5f7ed11f gnu: r-knitr: Update to 1.51.
 discard 5b07882016 gnu: r-rmumps: Update to 5.2.1-36.
 discard 3014b87f49 gnu: r-lamw: Update to 2.2.6.
 discard 16f098136b gnu: r-proxy: Update to 0.4-29.
 discard b1cc77e050 gnu: r-circlize: Update to 0.4.17.
 discard f12975d593 gnu: r-audio: Update to 0.1-12.
 discard 4726c8e79c gnu: r-rcppspdlog: Update to 0.0.24.
 discard 7c605c5540 gnu: r-rcppcctz: Update to 0.2.14.
 discard efaf2f242c gnu: r-ggtangle: Update to 0.1.0.
 discard bdc2beb627 gnu: r-mbess: Update to 4.9.42.
 discard 2ad041a9ab gnu: r-fastglm: Update to 0.0.4.
 discard baa5627995 gnu: r-hmisc: Update to 5.2-5.
 discard a9cad2a939 gnu: r-selectr: Update to 0.5-1.
 discard fb0130f5d1 gnu: r-secretbase: Update to 1.1.0.
 discard 84cac85781 gnu: r-astsa: Update to 2.4.
 discard 5fe1645124 gnu: r-mclogit: Update to 0.9.15.
 discard 3d07fe77e2 gnu: r-ga: Update to 3.2.5.
 discard de4e7d66f7 gnu: r-plumber: Update to 1.3.2.
 discard ce241eb9dc gnu: r-plotmo: Update to 3.7.0.
 discard 831652fd1c gnu: r-plotfunctions: Update to 1.5.
 discard e86a7bc90f gnu: r-oompabase: Update to 3.2.11.
 discard 97e7b82990 gnu: r-ggvenndiagram: Update to 1.5.7.
 discard 48c620cb51 gnu: r-zoo: Update to 1.8-15.
 discard 3f56365b13 gnu: r-climatol: Update to 4.4-0.
 discard b8a65820ab gnu: r-climaemet: Update to 1.5.0.
 discard 56706f52a8 gnu: r-robslopes: Update to 1.1.4.
 discard aafdc4aeaa gnu: r-ggstatsplot: Update to 0.13.4.
 discard 6032aaf4bc gnu: r-ggstats: Update to 0.12.0.
 discard 9f0fe55969 gnu: r-ggfittext: Update to 0.10.3.
 discard d05cba9d7c gnu: r-earth: Update to 5.3.5.
 discard 7c314feba6 gnu: r-data-table: Update to 1.18.0.
 discard cfac5535ea gnu: r-collapse: Update to 2.1.6.
 discard 5760dc550c gnu: r-cardx: Update to 0.3.1.
 discard f0e2d41aed gnu: r-abn: Update to 3.1.13.
 discard c891887181 gnu: r-metap: Update to 1.13.
 discard 4e1256f30f gnu: r-mutoss: Update to 0.1-14.
 discard 34ad6dc664 gnu: r-valr: Update to 0.9.1.
 discard 0fc2c5dbf2 gnu: r-cpp11bigwig: Update to 0.1.3.
 discard 7538efbdae gnu: r-bh: Update to 1.90.0-1.
 discard addbd53f81 gnu: r-testthat: Update to 3.3.2.
 discard 5b42580799 gnu: r-duckdb: Update to 1.4.3.
 discard 3a9ec1f2f9 gnu: r-shinystan: Update to 2.7.0.
 discard 022af270e6 gnu: r-rmapshaper: Add update note.
 discard 985b579385 gnu: r-glmmtmb: Disable one test.
 discard d2d58c156c gnu: r-vcr: Update to 2.1.0.
 discard 528c0ab922 gnu: r-maxlik: Update to 1.5-2.2.
 discard d10a42c454 gnu: r-microbiomestat: Update to 1.3.
 discard 560fad6ee7 gnu: r-paletteer: Update to 1.7.0.
 discard 74c8b12917 gnu: r-futile-logger: Update to 1.4.9.
 discard a9c49d701f gnu: r-yulab-utils: Update to 0.2.3.
 discard cbb40e7ecc gnu: r-aster: Update to 1.3-7.
 discard d476b72921 gnu: r-yaml: Update to 2.3.12.
 discard 07191daa74 gnu: r-wk: Update to 0.9.5.
 discard 7a9877c518 gnu: r-later: Update to 1.4.5.
 discard 062a82f0da gnu: r-redland: Update to 1.0.17-19.
 discard fd1cd37299 gnu: r-loo: Update to 2.9.0.
 discard ebf23b8315 gnu: r-litedown: Update to 0.9.
 discard 74cc5c0979 gnu: r-ctrdata: Update to 1.25.1.
 discard f94541bd30 gnu: r-rcpp: Update to 1.1.1.
 discard 7afd7c4a99 gnu: r-feather: Update to 0.4.0.
 discard e638ba6367 gnu: r-geos: Update to 0.2.5.
 discard f5f6e32939 gnu: r-htmltools: Update to 0.5.9.
 discard ef5c7cb1d6 gnu: r-httr2: Update to 1.2.2.
 discard 8c1a70d327 gnu: r-purrr: Update to 1.2.1.
 discard 620a33d46e gnu: r-e1071: Update to 1.7-17.
 discard f148675840 gnu: r-dbscan: Update to 1.2.4.
 discard 84a9f88a5a gnu: r-extradistr: Update to 1.10.0.1.
 discard df5019026c gnu: r-catdata: Update to 1.2.5.
 discard 41b00daa7d gnu: r-roi: Update to 1.0-2.
 discard ea90de12ce gnu: r-latex2exp: Update to 0.9.8.
 discard 7d9a79b13a gnu: r-xfun: Update to 0.55.
 discard 13d7a21a4c gnu: r-timeseries: Update to 4052.112.
 discard 5203c5c862 gnu: r-vim: Update to 7.0.0.
 discard bcb0b0e381 gnu: r-isoband: Update to 0.3.0.
 discard 9178f8bbc6 gnu: r-reformulas: Update to 0.4.3.1.
 discard 38a70afe89 gnu: r-parallelly: Update to 1.46.1.
 discard cf85f2d84a gnu: r-rlrsim: Update to 3.1-9.
 discard b781770c8c gnu: r-rsqlite: Update to 2.4.5.
 discard 3f62155791 gnu: r-exactextractr: Update to 0.10.1.
 discard 46d3b54809 gnu: r-vroom: Update to 1.6.7.
 discard 2859828a97 gnu: r-parsnip: Update to 1.4.0.
 discard 0afef2f3df gnu: r-tidypredict: Update to 1.0.0.
 discard 93a8d1d493 gnu: r-spatstat: Update to 3.5-0.
 discard 6fc7f938ee gnu: r-spatstat-linnet: Update to 3.4-0.
 discard f4af446560 gnu: r-patrick: Update to 0.3.1.
 discard d37d85bc37 gnu: r-xgboost: Update to 3.1.2.1.
 discard 5a0de3ed66 gnu: r-xml2: Update to 1.5.1.
 discard 9e137fe99d gnu: r-text2vec: Update to 0.6.6.
 discard 14ee4cd7eb gnu: r-yulab-utils: Update to 0.2.2.
 discard b231146071 gnu: r-performance: Update to 0.15.3.
 discard a7f1cf3765 gnu: r-doby: Update to 4.7.1.
 discard f803e14442 gnu: r-piton: Update to 1.0.1.
 discard b56e2b1c52 gnu: r-getoptlong: Update to 1.1.0.
 discard 321ee098a3 gnu: r-globaloptions: Update to 0.1.3.
 discard 8a7dae5927 gnu: r-bindr: Update to 0.1.3.
 discard 30d0e5af67 gnu: r-ggtangle: Update to 0.0.9.
 discard 6beb202bec gnu: r-mirai: Update to 2.5.3.
 discard aa2fd0005a gnu: r-ggpmisc: Update to 0.6.3.
 discard c106bf0afd gnu: r-lme4: Update to 1.1-38.
 discard 173af5fcba gnu: r-bestnormalize: Update to 1.9.2.
 discard 968a6dab50 gnu: r-runner: Update to 0.4.5.
 discard e0717f7b77 gnu: r-rpresto: Update to 1.4.8.
 discard a6f58c5957 gnu: r-gplots: Update to 3.3.0.
 discard 31cc55dede gnu: r-ggthemes: Update to 5.2.0.
 discard e7b586b977 gnu: r-ggbeeswarm: Update to 0.7.3.
 discard c3943c3077 gnu: r-cards: Update to 0.7.1.
 discard 3b21db9238 gnu: r-box: Update to 1.2.1.
 discard 961db3c8bd gnu: r-yaml: Update to 2.3.11.
 discard ec02e08434 gnu: r-testthat: Update to 3.3.1.
 discard bf8429f5f8 gnu: Add r-nlstools.
 discard b57f855cca gnu: Add r-qvcalc.
     add 4f2c1c865e gnu: Add emacs-vulpea.
     add 93d4bbe9b3 gnu: qpwgraph: Update to 0.9.8.
     new 7b7105d6f4 gnu: Add r-qvcalc.
     new 23aca44011 gnu: Add r-nlstools.
     new b0ad568481 gnu: r-testthat: Update to 3.3.1.
     new e71ce36200 gnu: r-yaml: Update to 2.3.11.
     new 54a45841aa gnu: r-box: Update to 1.2.1.
     new 32aef26eef gnu: r-cards: Update to 0.7.1.
     new 91d7a7e5e3 gnu: r-ggbeeswarm: Update to 0.7.3.
     new bac4ab4c89 gnu: r-ggthemes: Update to 5.2.0.
     new 2049a68d4b gnu: r-gplots: Update to 3.3.0.
     new 2dd033510e gnu: r-rpresto: Update to 1.4.8.
     new 49f19234a4 gnu: r-runner: Update to 0.4.5.
     new 81b4d185f0 gnu: r-bestnormalize: Update to 1.9.2.
     new f51ae669f5 gnu: r-lme4: Update to 1.1-38.
     new 877beb84bb gnu: r-ggpmisc: Update to 0.6.3.
     new 9d471c7640 gnu: r-mirai: Update to 2.5.3.
     new dc5daf903c gnu: r-ggtangle: Update to 0.0.9.
     new 0ae14b2ed5 gnu: r-bindr: Update to 0.1.3.
     new ab8d4d74a4 gnu: r-globaloptions: Update to 0.1.3.
     new b3e56b8c7f gnu: r-getoptlong: Update to 1.1.0.
     new 5a6d6a12d9 gnu: r-piton: Update to 1.0.1.
     new dd5756935d gnu: r-doby: Update to 4.7.1.
     new 59efc6a0ab gnu: r-performance: Update to 0.15.3.
     new 84a31306c0 gnu: r-yulab-utils: Update to 0.2.2.
     new 1f58c2752d gnu: r-text2vec: Update to 0.6.6.
     new 047379b713 gnu: r-xml2: Update to 1.5.1.
     new 6f88c8a10b gnu: r-xgboost: Update to 3.1.2.1.
     new ecc50ff018 gnu: r-patrick: Update to 0.3.1.
     new 08862cd0a7 gnu: r-spatstat-linnet: Update to 3.4-0.
     new f377784096 gnu: r-spatstat: Update to 3.5-0.
     new 507b7e0057 gnu: r-tidypredict: Update to 1.0.0.
     new f88d3a7edc gnu: r-parsnip: Update to 1.4.0.
     new ab2f665123 gnu: r-vroom: Update to 1.6.7.
     new a0322e037d gnu: r-exactextractr: Update to 0.10.1.
     new 4766bdb47e gnu: r-rsqlite: Update to 2.4.5.
     new bd28cc570e gnu: r-rlrsim: Update to 3.1-9.
     new de5428c828 gnu: r-parallelly: Update to 1.46.1.
     new c2da7181db gnu: r-reformulas: Update to 0.4.3.1.
     new 155b0b5572 gnu: r-isoband: Update to 0.3.0.
     new e75f23bf8b gnu: r-vim: Update to 7.0.0.
     new 4ac6629d23 gnu: r-timeseries: Update to 4052.112.
     new ffa5c1998d gnu: r-xfun: Update to 0.55.
     new 721a0c5d53 gnu: r-latex2exp: Update to 0.9.8.
     new e7900186d0 gnu: r-roi: Update to 1.0-2.
     new c492b0550e gnu: r-catdata: Update to 1.2.5.
     new 57a3a07b21 gnu: r-extradistr: Update to 1.10.0.1.
     new 791f0bb592 gnu: r-dbscan: Update to 1.2.4.
     new 84cc6690b9 gnu: r-e1071: Update to 1.7-17.
     new fb4e0eaa43 gnu: r-purrr: Update to 1.2.1.
     new 6995f06e07 gnu: r-httr2: Update to 1.2.2.
     new ce79985339 gnu: r-htmltools: Update to 0.5.9.
     new 0bea614596 gnu: r-geos: Update to 0.2.5.
     new 478a353ec6 gnu: r-feather: Update to 0.4.0.
     new 549a12cdd6 gnu: r-rcpp: Update to 1.1.1.
     new e61dd63e12 gnu: r-ctrdata: Update to 1.25.1.
     new f43d281ab9 gnu: r-litedown: Update to 0.9.
     new 00babecba4 gnu: r-loo: Update to 2.9.0.
     new 732f8aecd1 gnu: r-redland: Update to 1.0.17-19.
     new 91c6777a9e gnu: r-later: Update to 1.4.5.
     new 209459ae9f gnu: r-wk: Update to 0.9.5.
     new 1e824d05e1 gnu: r-yaml: Update to 2.3.12.
     new 242c4787fe gnu: r-aster: Update to 1.3-7.
     new f88ae25965 gnu: r-yulab-utils: Update to 0.2.3.
     new 10c3d4d776 gnu: r-futile-logger: Update to 1.4.9.
     new 21ba66dcf6 gnu: r-paletteer: Update to 1.7.0.
     new b01394ad09 gnu: r-microbiomestat: Update to 1.3.
     new cc2eb6218c gnu: r-maxlik: Update to 1.5-2.2.
     new 6b428b3a41 gnu: r-vcr: Update to 2.1.0.
     new f9defad970 gnu: r-glmmtmb: Disable one test.
     new 47057d493c gnu: r-rmapshaper: Add update note.
     new 93c27ead8e gnu: r-shinystan: Update to 2.7.0.
     new f3f94cfd23 gnu: r-duckdb: Update to 1.4.3.
     new 858e249792 gnu: r-testthat: Update to 3.3.2.
     new 0934d7060d gnu: r-bh: Update to 1.90.0-1.
     new 00b531b42e gnu: r-cpp11bigwig: Update to 0.1.3.
     new 473927547d gnu: r-valr: Update to 0.9.1.
     new 2a01856bc1 gnu: r-mutoss: Update to 0.1-14.
     new 7e2138e735 gnu: r-metap: Update to 1.13.
     new d0a61e992c gnu: r-abn: Update to 3.1.13.
     new 3a2fbcf23a gnu: r-cardx: Update to 0.3.1.
     new e59c247471 gnu: r-collapse: Update to 2.1.6.
     new d24c0a8783 gnu: r-data-table: Update to 1.18.0.
     new 7bd7b744b1 gnu: r-earth: Update to 5.3.5.
     new d02d9fb6f4 gnu: r-ggfittext: Update to 0.10.3.
     new 77f08f2a80 gnu: r-ggstats: Update to 0.12.0.
     new 8c2c197e4a gnu: r-ggstatsplot: Update to 0.13.4.
     new 05e8309710 gnu: r-robslopes: Update to 1.1.4.
     new 078790ec52 gnu: r-climaemet: Update to 1.5.0.
     new 8093098fc3 gnu: r-climatol: Update to 4.4-0.
     new 431992e7a6 gnu: r-zoo: Update to 1.8-15.
     new fb23a8db05 gnu: r-ggvenndiagram: Update to 1.5.7.
     new 0e6d2696eb gnu: r-oompabase: Update to 3.2.11.
     new c59d5d6508 gnu: r-plotfunctions: Update to 1.5.
     new b554d076dc gnu: r-plotmo: Update to 3.7.0.
     new 0014683e3b gnu: r-plumber: Update to 1.3.2.
     new 276b7a67d9 gnu: r-ga: Update to 3.2.5.
     new 2dacee5492 gnu: r-mclogit: Update to 0.9.15.
     new a1fe5ccf12 gnu: r-astsa: Update to 2.4.
     new 0c50fc74cd gnu: r-secretbase: Update to 1.1.0.
     new 218dd65cb9 gnu: r-selectr: Update to 0.5-1.
     new 0fd89ad2b6 gnu: r-hmisc: Update to 5.2-5.
     new 10f8ed4cd9 gnu: r-fastglm: Update to 0.0.4.
     new 728ea6a254 gnu: r-mbess: Update to 4.9.42.
     new 38ff41445b gnu: r-ggtangle: Update to 0.1.0.
     new 9bac90d0d9 gnu: r-rcppcctz: Update to 0.2.14.
     new b11e59ec6d gnu: r-rcppspdlog: Update to 0.0.24.
     new 07deca099e gnu: r-audio: Update to 0.1-12.
     new d5c49e9ab8 gnu: r-circlize: Update to 0.4.17.
     new 5eb6adec66 gnu: r-proxy: Update to 0.4-29.
     new 9a907c9972 gnu: r-lamw: Update to 2.2.6.
     new 1a98288c6d gnu: r-rmumps: Update to 5.2.1-36.
     new 09abef51d3 gnu: r-knitr: Update to 1.51.
     new c20a6d38d2 gnu: r-knitrbootstrap: Update to 1.0.4.
     new 0a887c9c3b gnu: r-broom: Update to 1.0.11.
     new d9b2ade138 gnu: r-statsexpressions: Update to 1.7.2.
     new aa78d580fc gnu: r-ordinal: Update to 2025.12-29.
     new 1464e046ca gnu: r-mice: Update to 3.19.0.
     new c4dc05d862 gnu: r-trycatchlog: Update to 1.3.3.
     new 4709aa2e12 gnu: r-venndiagram: Update to 1.8.2.
     new c8d2128f4f gnu: r-nanoparquet: Update to 0.4.3.
     new 99f009e744 gnu: r-statnet-common: Update to 4.13.0.
     new 35b13469eb gnu: r-tseries: Update to 0.10-59.
     new c52874c425 gnu: r-fbasics: Update to 4052.98.
     new 94b28dbd3e gnu: r-simdesign: Update to 2.22.
     new e2f5802da5 gnu: r-arules: Update to 1.7.13.
     new ff98ebdfe9 gnu: r-fsa: Update to 0.10.1.
     new 0db3d64e94 gnu: r-ggseqlogo: Update to 0.2.2.
     new 43a24130aa gnu: r-ggsci: Update to 4.2.0.
     new 67dc226ae5 gnu: r-itsadug: Update to 2.5.
     new 0c8ba82615 gnu: r-pupillometryr: Update to 0.0.7.
     new 02102cc7af gnu: r-officer: Update to 0.7.2.
     new 9a1672ac46 gnu: r-insight: Update to 1.4.4.
     new efdc7a703a gnu: r-nodbi: Update to 0.14.0.
     new f72b81bebb gnu: r-abcrf: Update to 2.0.
     new 4fac49dc51 gnu: r-gam: Update to 1.22-7.
     new 507ae27a20 gnu: r-superlearner: Update to 2.0-40.
     new 84f8fbf02d gnu: r-dofuture: Update to 1.1.3.
     new 2f85c9c90c gnu: r-svdialogs: Update to 1.1.2.
     new a767fca48c gnu: r-emmeans: Update to 2.0.1.
     new 6b55d3b96a gnu: r-bayesplot: Update to 1.15.0.
     new d51fd23277 gnu: r-tmb: Update to 1.9.19.
     new bdb9a18247 gnu: r-ggeffects: Update to 2.3.2.
     new b54d735083 gnu: r-gert: Update to 2.3.1.
     new 564c7583f2 gnu: r-mvabund: Update to 4.2.8.
     new 4bac459741 gnu: r-afex: Update to 1.5-1.
     new 796f385bad gnu: r-fmesher: Update to 0.6.1.
     new f72d19052e gnu: r-tm: Update to 0.7-17.
     new c2954c0bbb gnu: r-tidytree: Update to 0.4.7.
     new 9471da1626 gnu: r-sparsevctrs: Update to 0.3.5.
     new 4b017c5358 gnu: r-rncl: Update to 0.8.8.
     new 60391add36 gnu: r-gmisc: Update to 3.1.0.
     new 16d471d7e0 gnu: r-spam: Update to 2.11-3.
     new dcdf94f332 gnu: r-future-apply: Update to 1.20.1.
     new 725684f461 gnu: r-shinybs: Update to 0.63.0.
     new 2a6394e5d0 gnu: r-testit: Update to 0.15.
     new 12e5fbe79a gnu: r-msir: Update to 1.4.
     new 19c3e92529 gnu: r-lavaan: Update to 0.6-21.
     new 3367003ba3 gnu: r-pegas: Update to 1.4.
     new 5d0f5f2e48 gnu: r-bqtl: Update to 1.0-39.
     new 768ab7aaa9 gnu: r-bookdown: Update to 0.46.
     new 970e0b925c gnu: r-gggenes: Update to 0.6.0.
     new 695036e3c4 gnu: r-arrow: Update to 22.0.0.1.
     new 17ab719f55 gnu: r-sctransform: Update to 0.4.3.
     new adc593a636 gnu: r-blme: Update to 1.0-7.
     new 7c6db7e05d gnu: r-leidenbase: Update to 0.1.36.
     new 316b1532c7 gnu: r-terra: Update to 1.8-93.
     new 2d01576731 gnu: r-lifecycle: Update to 1.0.5.
     new e93915e3e8 gnu: r-r-devices: Update to 2.17.3.
     new 2b8ccd43c0 gnu: r-hdrcde: Update to 3.5.0.
     new f3e7c4177a gnu: r-imager: Update to 1.0.8.
     new 7a65224208 gnu: r-anthropometry: Update to 1.21.
     new 93b8673a16 gnu: r-knn-covertree: Update to 1.1.
     new 64aeb6f6ab gnu: r-forecast: Update to 9.0.0.
     new 81e6847c6e gnu: r-polycor: Update to 0.8-2.
     new 95871f25b4 gnu: r-butcher: Update to 0.4.0.
     new 11fbc0af26 gnu: r-rsconnect: Update to 1.7.0.
     new 22badde3a3 gnu: r-rstantools: Update to 2.6.0.
     new b385404a19 gnu: r-kendall: Update to 2.2.2.
     new 03df9e86c1 gnu: r-projpred: Update to 2.10.0.
     new 3c11077ba6 gnu: r-shapforxgboost: Update to 0.2.0.
     new 381113bdac gnu: r-spatstat-utils: Update to 3.2-1.
     new 0cc48b27ce gnu: r-clusterr: Update to 1.3.6.
     new 73a784b00a gnu: r-nanoarrow: Update to 0.7.0-2.
     new cf499d1b4c gnu: r-tidypredict: Update to 1.0.1.
     new 923aace2bb gnu: r-parsnip: Update to 1.4.1.
     new f91e243821 gnu: r-infer: Update to 1.1.0.
     new 65fc014b6c gnu: r-lsa: Update to 0.73.4.
     new 36104616d3 gnu: r-qtl: Update to 1.74.
     new bc7f818a72 gnu: r-seuratobject: Update to 5.3.0.
     new 27ab343e4d gnu: r-seurat: Update to 5.4.0.
     new 73b841cc4f gnu: r-mlr3: Update to 1.3.0.
     new fcdfdd0c41 gnu: r-mlr3learners: Update to 0.14.0.
     new 59c191d823 gnu: r-mlr3tuning: Update to 1.5.1.
     new f846feed81 gnu: r-highlight: Update to 0.5.2.
     new 30f4c2a70f gnu: r-stars: Update to 0.7-0.
     new b0c914adbb gnu: r-delaporte: Update to 8.4.3.
     new 7c131ed0a4 gnu: r-vgam: Update to 1.1-14.
     new ec3d55b594 gnu: r-tesseract: Update to 5.2.4.
     new 8e7e4d78e2 gnu: r-rlang: Update to 1.1.7.
     new 59def874db gnu: r-tibble: Update to 3.3.1.
     new 948094ebb0 gnu: r-rcpparmadillo: Update to 15.2.3-1.
     new 5fa8e5e548 gnu: r-tidyr: Update to 1.3.2.
     new 0f04efda24 gnu: Add r-tidydr.
     new 195d11cf7a gnu: r-screpertoire: Update to 2.6.2.
     new 7d5921a06f gnu: r-txdbmaker: Update to 1.6.2.
     new 58487fb692 gnu: r-reactome-db: Update to 1.95.0.
     new 0706a943cc gnu: r-systempiperdata: Update to 2.14.2.
     new 722517ba25 gnu: r-anvil: Update to 1.22.3.
     new 3228ba3b51 gnu: r-atena: Update to 1.16.1.
     new 2cbc82bf47 gnu: r-escape: Update to 2.6.2.
     new 2e4641c081 gnu: r-immapex: Update to 1.4.3.
     new 9a3d16e594 gnu: r-edger: Update to 4.8.2.
     new f9542ba178 gnu: r-enhancedvolcano: Update to 1.28.2.
     new 4bfe2a34f0 gnu: r-genomeinfodb: Update to 1.46.2.
     new 9f83b4a7b5 gnu: r-genomicranges: Update to 1.62.1.
     new 29f8a4b322 gnu: r-gsva: Update to 2.4.4.
     new 27d291be6e gnu: r-rcy3: Update to 2.30.1.
     new 6d984e10ec gnu: r-rhdf5: Update to 2.54.1.
     new f52fe1a0d8 gnu: r-rtracklayer: Update to 1.70.1.
     new 850fcaf7eb gnu: r-sesame: Update to 1.28.1.
     new f81f9500d6 gnu: r-tcgautils: Update to 1.30.2.
     new 17c8b38178 gnu: r-transcriptr: Update to 1.38.3.
     new be9c41cf7a gnu: r-spectra: Update to 1.20.1.
     new d116f5be50 gnu: r-systempiper: Update to 2.16.3.
     new f5341753d2 gnu: r-tximport: Update to 1.38.2.
     new 5b3913c5da gnu: r-zellkonverter: Update to 1.20.1.
     new 44e50aba0a gnu: r-graph: Update to 1.88.1.
     new c98679f4aa gnu: r-ggtree: Update to 4.0.4.
     new 3a187c3e82 gnu: r-fgsea: Update to 1.36.2.
     new 6eadc05fe8 gnu: r-enrichplot: Update to 1.30.4.
     new 309c704103 gnu: r-clusterprofiler: Update to 4.18.4.
     new b27fc9d73e gnu: r-yapsa: Update to 1.36.1.
     new 2c79d5c8d2 gnu: r-wppi: Update to 1.18.0.
     new 1e9f91041e gnu: r-flowcore: Update to 2.22.1.
     new d45195ef1d gnu: r-ggcyto: Update to 1.38.1.
     new 6ab38c5c06 gnu: r-flowworkspace: Update to 4.22.1.
     new b3b4b19247 gnu: r-variancepartition: Update to 1.40.1.
     new 61f8885628 gnu: r-ucsc-utils: Update to 1.6.1.
     new 810c3ea429 gnu: r-bioccheck: Update to 1.46.3.
     new d09496cf27 gnu: r-s4arrays: Update to 1.10.1.
     new 5431cb7817 gnu: r-h5mread: Update to 1.2.1.
     new 44ac92f9ba gnu: r-sparsearray: Update to 1.10.8.
     new 4132279b9b gnu: r-mscoreutils: Update to 1.22.1.
     new 188e3b8158 gnu: r-bayesspace: Update to 1.20.2.
     new 1a5534da2c gnu: r-tximeta: Update to 1.28.1.

This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version.  This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:

 * -- * -- B -- O -- O -- O   (007a2e2cd1)
            \
             N -- N -- N   refs/heads/r-team (1a5534da2c)

You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.

Any revisions marked "omit" are not gone; other references still
refer to them.  Any revisions marked "discard" are gone forever.

The 244 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 gnu/packages/audio.scm        |   4 +-
 gnu/packages/bioconductor.scm | 184 +++++++++++++++++++++---------------------
 gnu/packages/cran.scm         |  23 ++++++
 gnu/packages/emacs-xyz.scm    |  46 +++++++++++
 4 files changed, 163 insertions(+), 94 deletions(-)

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