guix_mirror_bot pushed a commit to branch r-team
in repository guix.
commit b01394ad097b359fb52256144ae8c7e913a9182a
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Wed Jan 14 17:42:01 2026 +0100
gnu: r-microbiomestat: Update to 1.3.
* gnu/packages/bioconductor.scm (r-microbiomestat): Update to 1.3.
[properties]: Record updater-extra-inputs and updater-extra-native-inputs.
[inputs]: Add nlopt.
[native-inputs]: Add pkg-config.
[propagated-inputs]: Add r-bbmisc, r-dplyr, r-foreach, r-lhs, r-mlr,
r-mlrmbo,
r-paramhelpers, r-rcpp, r-rcpparmadillo, and r-smoof.
Change-Id: Ia326065121daeacb364ab07e82d4435f228f01f7
---
gnu/packages/bioconductor.scm | 24 +++++++++++++++++++-----
1 file changed, 19 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3461983850..0c40a0dea2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015-2025 Ricardo Wurmus <[email protected]>
+;;; Copyright © 2015-2026 Ricardo Wurmus <[email protected]>
;;; Copyright © 2016, 2017, 2018, 2020, 2021 Roel Janssen <[email protected]>
;;; Copyright © 2016 Pjotr Prins <[email protected]>
;;; Copyright © 2016 Ben Woodcroft <[email protected]>
@@ -18515,23 +18515,37 @@ standardization of the analyses and the development
of best practices.")
(define-public r-microbiomestat
(package
(name "r-microbiomestat")
- (version "1.2")
+ (version "1.3")
(source (origin
(method url-fetch)
(uri (cran-uri "MicrobiomeStat" version))
(sha256
(base32
- "1kpc68sl63k104xy7r6f3gxan0yx0rs7ksn8ldbq8xla00ddflgq"))))
- (properties `((upstream-name . "MicrobiomeStat")))
+ "02xg8l4d0z5wrdrm5dj5a0q51vsbhf3f6z2lk8294c4d85s09dhl"))))
+ (properties
+ '((upstream-name . "MicrobiomeStat")
+ (updater-extra-inputs . ("nlopt"))
+ (updater-extra-native-inputs . ("pkg-config"))))
(build-system r-build-system)
- (propagated-inputs (list r-foreach
+ (inputs (list nlopt))
+ (native-inputs (list pkg-config))
+ (propagated-inputs (list r-bbmisc
+ r-dplyr
+ r-foreach
r-ggplot2
r-ggrepel
+ r-lhs
r-lmertest
r-mass
r-matrix
r-matrixstats
+ r-mlr
+ r-mlrmbo
r-modeest
+ r-paramhelpers
+ r-rcpp
+ r-rcpparmadillo
+ r-smoof
r-statmod))
(home-page "https://cran.r-project.org/package=MicrobiomeStat";)
(synopsis "Statistical methods for microbiome compositional data")
