guix_mirror_bot pushed a change to branch crypto-team
in repository guix.
omit 85bff3d583 gnu: beancount: Remove and replace by beancount-3.
omit d1181caf74 gnu: cpuinfo: Update to 0.0-7.c4b4f4b.
omit d58c13dd00 gnu: emacs-substitute: Update to 0.5.0.
omit b861a3787b gnu: emacs-consult: Update to 3.2.
omit 88e5efec9f gnu: iverilog: Update to 20251012.
omit 81e39f4878 gnu: mcy: Update to 0.61.
omit 79ba1666c0 gnu: eqy: Update to 0.61.
omit 8783bf40f0 gnu: sby: Update to 0.61.
omit 9cd9c75eed gnu: verilator: Update to 5.044.
omit ffbe51f928 gnu: python-liberty-parser: Update to 0.0.29.
omit b1de93f0ba gnu: python-blacksheep: Update to 2.4.6.
omit a412fdb1d4 gnu: openscad: Update dependency on tbb.
omit 1afa90ee1e gnu: mold: Update dependency on tbb.
omit c8756794f5 gnu: dyninst: Update dependency on tbb.
omit bcf642e9cd gnu: mu: Update to 1.12.15.
omit 4d8a1fe042 gnu: r-terra: Update dependency on tbb.
omit c6e2e0f6dd gnu: r-quanteda: Update dependency on tbb.
omit 88251570b0 gnu: pagmo: Update dependency on tbb.
omit acdbbcb998 gnu: manifold: Update to 3.3.2.
omit 5854428560 gnu: Add m8c-serial.
omit 2b94eecd0c gnu: m8c: Update to 2.2.3.
omit 858680ba46 gnu: ccid: Switch to meson-build-system
omit 1dca21412f gnu: pcsc-lite: Update to 2.4.0
omit 4e22152163 gnu: python-gnupg: Update to 0.5.6.
omit 45af1b1f88 gnu: nettle: Update to 3.10.2.
omit 09fc2f243c gnu: nettle: Modernize.
omit 8cd8f0841e gnu: libfido2: Update to 1.16.0.
omit 0a9e1cb58b gnu: libressl: Update to 4.2.1.
omit 363e2be2b6 gnu: libssh2: Update to 1.11.1.
omit 946e370302 gnu: gnupg: Update to 2.4.8.
omit 1087e41a9b gnu: mailcap: Modernize package style.
omit a58de0b454 gnu: mailcap: Update to 2.1.54.
omit a8b817fa51 gnu: Remove dataparksearch.
omit 4a92f8749a gnu: Add projectm-sdl.
omit 0b03c48afc gnu: imgui: Keep binary_to_compressed_c.cpp.
omit b148f252e5 gnu: Add projectm-presets.
omit 117bdea3f6 gnu: Add projectm.
omit af484418a5 gnu: Add projectm-eval.
omit af0678f5e4 gnu: python-pyzmq: Do not run flaky tests.
omit 2a7acb7ed5 etc: Add csantosb to reproduciblebuilds team.
omit 93d4bbe9b3 gnu: qpwgraph: Update to 0.9.8.
omit 4f2c1c865e gnu: Add emacs-vulpea.
omit 69f5f4f2a5 gnu: qgpgme-qt6: Rename to qgpgme.
omit 6d99610cb1 gnu: qgpgme: Rename to qgpgme-qt5.
omit 8e592f6172 gnu: kget: Add qpgme input.
omit 063bd57be0 gnu: kmailcommon: Correct input for Qt6.
omit e2650c24a2 gnu: kwallet: Correct input for Qt6.
omit c9891ea8a3 gnu: Remove taglib-next.
omit f3cf50451f gnu: python-pytaglib: Update dependency on taglib.
omit cddffe7f42 gnu: emacs-beancount: Update to 0.9.0-0.8a564f5.
omit 42ac7c8c66 gnu: beancount-3: Update to 3.2.0.
omit 8f3dbad02a gnu: beanquery: Ignore failing tests.
omit 5dc0d3be31 gnu: texlive build system: Install info files and man pages.
omit 8cf44901b6 gnu: Fix reproducibility for some TeX Live packages.
omit 34158d7948 gnu: Remove nyxt.
omit c74399edaf gnu: Remove emacs-nyxt.
omit dd336e4810 gnu: Remove xxkb.
omit 91cc91fb61 gnu: Remove python-islenska.
omit 4948c022d5 gnu: python-lief: Update to 0.17.2.
omit 7770c4c6c3 gnu: python-forbiddenfruit: Fix build.
omit 5e436dacef gnu: python-flask-cors: Update to 6.0.2.
omit 06345e1dd3 gnu: Remove python-sqlalchemy-stubs.
omit 6b664c2a27 gnu: Remove sqlcrush.
omit 69180224cd gnu: python-brian2tools: Switch to pyproject.
omit 08913c5a2e gnu: python-pyxel: Switch to pyproject.
omit 2aa7e12727 gnu: python-pyspoa: Switch to pyproject.
omit 74f534d949 gnu: python-pytorch: Switch to pyproject.
omit c5a9e72b8f gnu: python-pypairix: Fix package.
omit 32727afc6f gnu: hg-commitsigs: Switch to pyproject.
omit 70db24a614 gnu: mercurial: Switch to pyproject.
omit d10527c3c9 gnu: flair: Switch to pyproject.
omit 88d70b0915 gnu: syncplay: Switch to pyproject.
omit 08bd82f41e gnu: gmsh: Switch to pyproject.
omit 2907695671 gnu: ringdecomposerlib: Switch to pyproject.
omit f38eba4859 gnu: python-celery: Update to 5.6.2.
omit a1c95160ed gnu: python-kombu: Update to 5.6.0.
omit a60892363b gnu: python-click-plugins-1: Add a maintenance note.
omit d1af47afc8 gnu: python-celery: Fix build on CI.
omit db380b0d3d gnu: python-pyjanitor: Update to 0.32.5.
omit 2445517ee7 gnu: python-pandas-flavor: Update to 0.8.1.
omit 0521936841 gnu: h-client: Switch to pyproject.
omit 4e227eb5f1 gnu: hplip: Switch to pyproject.
omit c53a968583 gnu: sugar-datastore: Switch to pyproject.
omit ee2765c3a6 gnu: sugar: Switch to pyproject.
omit 288b00468f gnu: electron-cash: Switch to pyproject.
omit 8f3262ad63 gnu: rdkit: Switch to pyproject.
omit e55d512f83 gnu: createrepo-c: Switch to pyproject.
omit a5a22e75a4 gnu: gemmi: Switch to pyproject.
omit ded4073912 gnu: python-xapp: Drop uneeded arguments.
omit 23a8734630 gnu: libxapp: Switch to pyproject.
omit 0c3a469a04 gnu: libcap-ng: Update to 0.9.
omit 69092b838e gnu: Add python-flask-paginate.
omit 91ed5d9263 gnu: darkman: Update to 2.3.0.
omit 0563a985ba gnu: Add go-github-com-lmittmann-tint.
omit dfe4f86ee1 gnu: quodlibet: Fix operon GI path.
omit b990bcbbe6 gnu: fastfetch-minimal: Update to 2.57.0
omit 15e5b75df7 gnu: python-scikit-misc: Don't propagate python-numpydoc.
omit 35ec94ad58 gnu: python-pynetdicom: Don't propagate python-numpydoc.
omit b833238962 gnu: python-liana-py: Don't propagate python-numpydoc.
omit e8740dc621 gnu: python-tmx: Switch to pyproject.
omit c1ab4db7d9 gnu: assword: Rename to impass.
omit 02d5ada7e6 gnu: python-jsonnet: Switch to pyproject.
omit 134eb1b8e3 gnu: python-pygame: Update to 2.6.1.
omit da142d03d0 gnu: terminator: Switch to pyproject.
omit 3037710556 gnu: python-librecaptcha: Switch to pyproject.
omit 8caf1ceb8c gnu: weechat-wee-slack: Update to 2.11.0.
omit d2ee6423b5 gnu: python-ruffus: Switch to pyproject.
omit 6d5f92d7ed gnu: python-geosketch: Update to 1.3.
omit c12271bf4f gnu: calibre: Update to 8.16.2.
omit b8935035e3 gnu: python-xsge: Switch to pyproject.
omit 08b7cb622d gnu: Bump rocm to version 7.1.0
omit c6fbec50f4 gnu: guile: Add 3.0.11.
omit 493d2f38ca tests: Adjust to Guile 3.0.10+.
omit 797b9436d2 gnu: Remove hdf4-alt.
omit be96a252df gnu: coda: Remove hdf4 input.
omit 169652f7f4 gnu: Remove hdf4.
omit eec7ed347b gnu: hdf4-alt: Disinherit from hdf4.
omit b8cee7f284 gnu: Remove python-pyhdf.
omit b0097b87fd gnu: Remove python-hdf4.
omit e246cf2200 gnu: Remove gctp.
omit e4ff466764 gnu: Remove hdf-eos5.
omit aca1bb0c03 gnu: Remove hdf-eos2.
omit ddfef54fb5 gnu: python-sphinx-autoapi: Update to 3.6.1.
omit ed69909557 gnu: python-brian2tools: Fix build.
omit 9fd8ba94fa gnu: python-scanrbp: Include data in package.
omit fc44f69b10 gnu: python-domain-connect: Remove unused inputs.
omit 884ea043db gnu: nml: Switch to pyproject.
omit 9283251b3c gnu: grokmirror: Update to 2.0.12.
omit 7c2ba97b96 gnu: shirah: Switch to pyproject.
omit 9e8027f94b gnu: python-biothings-client: Update to 0.4.1.
omit 3d6fbf76c1 gnu: patatt: Switch to pyproject.
omit fef425c710 gnu: temper-exporter: Switch to pyproject.
omit 0f18ca3f61 gnu: python-pyinotify: Reduce package closure size.
omit 236b3b668a gnu: gnome-plots: Switch to pyproject.
omit 4109fd96ad gnu: python-libevdev: Update to 0.13.1.
omit 2d2b592977 gnu: mkbootimg: Switch to copy-build-system.
omit cde8b9aeb5 gnu: mdpo: Update to 2.1.4.
omit 3f4cf18e1e gnu: python-pymd4c: Update to 1.3.0.
omit e7d64d2cc6 gnu: Add python-importlib-metadata-argparse-version.
omit 5fae37a72d gnu: Add python-md-ulb-pwrap.
omit 814e4bfa67 gnu: Add python-unicode-linebreak.
omit 03112d5a44 gnu: python-dbusmock: Update to 0.37.2.
omit 7d90d59e1d gnu: python-pyinotify: Switch to pyproject.
omit 0a68814a3c gnu: python-jinja2-time: Disable tests.
omit 3b23f601b7 gnu: python-pypeg2: Switch to pyproject.
omit fb43b7ac6d gnu: python-jellyfish: Update to 1.2.1.
omit bf9a3416ab gnu: python-emoji-for-gh-md-to-html: Switch to pyproject.
omit 6e699a8144 gnu: python-pebble: Update to 5.1.3.
omit 5862537982 gnu: python-notify2: Switch to pyproject.
omit 69b99ec0ca gnu: python-jinja2-time: Switch to pyproject.
omit eac066ab01 gnu: python-crossenv: Update to 1.6.1.
omit 0f16888a58 gnu: magic: Update to 8.3.590.
omit 7db4266d84 gnu: m8c: Update to 2.2.2.
omit ee40b43150 gnu: python-django-allauth: Update to 65.13.1.
omit 237b52da20 gnu: z3: Switch to pyproject.
omit a426cfd6a5 gnu: quodlibet: Switch to pyproject.
omit 3bc2f68365 gnu: fp16: Switch to pyproject.
omit 82c5229109 gnu: python-ipydatawidgets: Switch to pyproject.
omit 58985be544 gnu: jupyter: Switch to pyproject.
omit fa7931e71c gnu: sonata: Switch to pyproject.
omit bdbb3f2e8b gnu: pass-rotate: Switch to pyproject.
omit aab47ec28e gnu: qspectrumanalyzer: Switch to pyproject.
omit cfc5c5ce59 gnu: xpra: Switch to pyproject.
omit 1890dc4a76 gnu: kapidox: Switch to pyproject.
omit 0067aefeb6 gnu: python2-pycparser: Move to (gnu packages pypy).
omit da44247bd7 gnu: python2-cffi: Move to (gnu packages pypy).
omit abac9bbad8 gnu: python2-cffi: Migrate to pyproject and decouple.
omit 841d29cd26 gnu: python2-pycparser: Migrate to pyproject and decouple.
omit b39eea07ae build-system: python: Accept pyproject
package-with-explicit-python.
omit d8ac3bc137 gnu: duplicity: Remove python-lockfile propagated-input.
omit 3b865cc317 gnu: python-cachecontrol: Remove python-lockfile
propagated-input.
omit 2492766f93 gnu: python-daemon: Replace python-lockfile by
python-filelock.
omit b0896df20e gnu: python-pyvista: Ignore failing test.
omit b5d9e87fa7 gnu: python-pyts: Update to 0.13.0-0.4f3d97b.
omit 9c86277b4d gnu: python-pgmpy: Ignore flaky tests.
omit 2c8647fabe gnu: python-drep: Skip additional test.
omit e83629c6c9 gnu: scregseg: Skip 'sanity-check phase.
omit 43790c1d0c gnu: python-coolbox: Fix inputs.
omit 9100178872 gnu: python-sphinx-autodoc-typehints: Update to 2.3.0.
omit 2f6ea408d3 gnu: Remove python-pynbody-1.
omit 71a2c3ceeb gnu: Remove python-aioredis.
omit 3a9528b68e gnu: python-genomepy: Update to 0.16.3.
omit 273b22158c gnu: python-mysql-connector-python: Skip one more test.
omit 79321019de gnu: python-timezonefinder: Use python-numpy@1.
omit 2dd2e86284 gnu: python-cylp: Update to 0.94.0.
omit 003121c3aa gnu: Remove music21.
omit 115238d7ec gnu: python-qutip: Update to 5.2.2.
omit dd54595684 gnu: python-petrofit: Reduce closure size.
omit 661c974fa7 gnu: python-statmorph: Use python-numpy@1.
omit 553fcd822c gnu: python-pysat: Skip more tests.
omit faed98ff40 gnu: python-pyopencl: Update to 2026.1.
omit 9aa869eea2 gnu: python-nanobind: Update to 2.10.2.
omit 3da83118bc gnu: python-pytools: Add missing propagated inputs, enable
tests.
omit 1f9e71bc69 gnu: Add python-siphash24.
omit a4c52b2591 gnu: Add c-siphash.
omit fb7139ad64 gnu: Add c-stdaux.
omit ed0e5fa4db gnu: python-pymol: Use python-numpy@1.
omit 2ff921a582 gnu: openmm: Remove shaky tests.
omit 6497fe80ca gnu: python-pymc: Update to 5.27.0.
omit 0a0811e353 gnu: python-pytensor: Update to 2.36.3.
omit fb0f081f84 gnu: python-fastparquet: Update to 2025.12.0.
omit 45342949c9 gnu: python-pygam: Update to 0.12.0.
omit b4b741d8a8 gnu: python-pyemd: Use python-numpy@1.
omit c5ffe5463d gnu: python-pot: Update to 0.9.6.post1.
omit c5267a746b gnu: python-pingouin: Fix tests.
omit c5ca5189ce gnu: python-phenograph: Fix tests.
omit e94869fe0c gnu: python-scikit-survival: Fix indentation.
omit ff862ec6df gnu: python-scikit-survival: Update to 0.26.0.
omit faa17615c3 gnu: Remove python-dask-expr.
omit 21dc790aa8 gnu: openmm: Update to 8.4.0.
omit 745b167ff3 gnu: Remove fanc.
omit 95efbabe4e gnu: Remove ginga-qt5.
omit dc3e3854ed gnu: Remove python-webbpsf.
omit 7ceac0e653 gnu: Remove python-watchgod.
omit 3a982b293d gnu: Remove python-statannot.
omit ca0b9532b8 gnu: python-perfplot: Use python-numpy@1.
omit 4bee89e9ab gnu: python-peaks2utr: Use python-numpy@1.
omit c7eaab59c1 gnu: python-pandapower: Update to 3.3.0.
omit 70bd0ee395 gnu: python-deepdiff: Update to 8.6.1.
omit 176ec8022c gnu: Add python-uuid6.
omit 3c8f19d05e gnu: python-orthopy: Use python-numpy@1.
omit d401209f98 gnu: python-numpysane: Use python-numpy@1.
omit 8dfedc85ca gnu: python-metpy: Update to 1.7.1.
omit 20bc296d19 gnu: python-mathics-core: Use python-numpy@1.
omit 88d6a7040b gnu: python-pysm3: Relax requirements for NumPy and SciPy.
omit 62c1d35d31 gnu: python-lifelines: Simplify tests.
omit c334f6652b gnu: python-pytoolconfig: Reduce closure size.
omit 6715b2bbb3 gnu: python-pandas-stubs: Update to 2.3.3.251219.
omit 5e302ca610 gnu: python-liana-py: Update to 1.6.1.
omit 22cb31ef18 gnu: python-decoupler: Update to 2.1.2.
omit 4418f58a3d gnu: python-iced: Update to 0.6.0.
omit e1968e2209 gnu: python-hyperopt: Fix build.
omit e0eb24970c gnu: python-tortoise-orm: Update to 0.25.3.
omit 64a3c5e479 gnu: python-pypika-tortoise: Update to 0.6.3.
omit 5d6f741cf7 gnu: python-pyreadstat: Update to 1.3.2.
omit ef3d015d40 gnu: python-narwhals: Update to 2.15.0.
omit c40b161e0f gnu: Add python-narwhals-minimal.
omit bb791c062f gnu: python-watchfiles: Update to 1.1.1.
omit df8ce4cbc7 gnu: python-libneuroml: Update to 0.6.7.
omit 86e2df0c73 gnu: python-imagecodecs: Fix build.
omit 3d34ef2d0c gnu: python-quadpy: Use python-numpy@1.
omit c01549a726 gnu: python-accupy: Use python-numpy@1.
omit 4e8d60b5e2 gnu: python-pyfma: Use python-numpy@1.
omit b88f610356 gnu: python-salib: Update to 1.5.2.
omit 65932afca1 gnu: python-muon: Use python-numpy@1.
omit e35ba6a1fc gnu: python-pyamg: Update to 5.3.0.
omit bb2797b2fd gnu: python-pygenometracks: Update to 3.9.
omit 55d9893b78 gnu: python-hicmatrix: Update to 17.2.
omit 493d97f767 gnu: pigx-scrnaseq: Use python-numpy@1.
omit 59fa97ac70 gnu: python-sbpy: Skip one doc test.
omit b3cd375df6 gnu: scvelo: Update to 0.3.3.
omit ae69352f27 gnu: python-hic2cool: Fix tests.
omit 4469d63da3 gnu: python-hdf5storage: Use pythno-numpy@1.
omit 19995384aa gnu: python-dcor: Use python-numpy@1.
omit f52e8b9df5 gnu: coda: Use python-numpy@1.
omit 9248162c8f gnu: dolphin-emu: Use python-numpy@1.
omit b4733bb2c2 gnu: Add python-statannotations.
omit 82eecc6e0c gnu: python-scikit-surprise: Use python-numpy@1.
omit b88af4c69e gnu: python-spisea: Use python-numpy@1.
omit a7cc114d81 gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3.
omit 1e7d8cf3fe gnu: python-paramz Move to machinve-learning.
omit c6123e5141 gnu: python-gpy: Use python-numpy@1.
omit e0c0cf27e7 gnu: python-paramz: Use python-numpy@1.
omit 48e2259b21 gnu: rdkit: Use python-numpy@1.
omit 6786fc3996 gnu: boost-numpy: Use python-numpy@1.
omit a199dde0a2 gnu: python-scikit-learn-1.6: Skip 3 more tests.
omit f4d3acf2cf gnu: python-vector: Update to 1.7.0.
omit 0519ddaa34 gnu: python-papermill: Reduce closure size; skip 2 tests.
omit f6bba86c81 gnu: python-glue-qt: Relax requirements for ipython version.
omit c53bf6bbb9 gnu: Remove python-xarray-datatree.
omit 474d47d359 gnu: python-multiscale-spatial-image: Update to 2.0.3.
omit 00914c0f25 gnu: Add python-xarray-dataclass.
omit b912010586 gnu: python-fenics-ffc: Use python-numpy@1.
omit 77b45f4f52 gnu: python-fenics-ufl-2019: Use python-numpy@1.
omit f11b4ef829 gnu: python-episcanpy: Use python-numpy@1.
omit 14c09c227e gnu: python-utilities-awetzel: Remove relax-requirements
phase.
omit 04d58412cb gnu: python-specreduce: Remove relax-requirements phase.
omit 71a4430f6e gnu: python-sncosmo: Adjust phases.
omit 8317af26da gnu: python-sep: Remove relax-requirements phase.
omit 4ac8c80726 gnu: python-gizmo-analysis: Remove relax-requirements phase.
omit 4f377a0493 gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
omit b49ef25275 gnu: Add python-stregion.
omit 61e58fc173 gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
omit bf308e0fa3 gnu: python-mygene: Switch to pyproject.
omit e9254a548f gnu: python-funsor: Update to 0.4.6.
omit bc0f8f28dd gnu: python-deeptools: Update to 3.5.6.
omit 928df16816 gnu: python-deepdish: Use python-numpy@1.
omit 88df9ea2f7 gnu: python-tdda: Skip one more test.
omit c51de941c7 gnu: piglit: Use python-numpy@1.
omit 8f8c2000f1 gnu: cnvkit: Update to 0.9.12-0.52f367b.
omit b770d7cf8a gnu: python-pyfaidx: Update to 0.9.0.3.
omit b02e79fa9d gnu: python-pomegranate: Move to machine-learning.
omit 657d50498c gnu: python-pomegranate: Update to 1.1.0.
omit 8b6273058a gnu: Add python-apricot-select.
omit 5a538af9b7 gnu: python-presto: Improve package, fix tests.
omit 08912799cc gnu: python-brian2: Update to 2.10.1.
omit 522142c52c gnu: macs-3: Update to 3.0.3.
omit 95de2f9dbd gnu: python-cellbender: Update to 0.3.2.
omit 6dc3bceeac gnu: python-captum: Update to 0.8.0-0.4fade3a.
omit 339fba164c gnu: mageck: Use python-numpy@1.
omit 16f24224fc gnu: idr: Fix build.
omit dee799cc32 gnu: python-cnmf: Update to 1.7.0.
omit 7ee6afdb7a gnu: python-cooltools: Update to 0.7.1.
omit 5467c351a3 gnu: python-magic-impute: Update to 3.0.0.
omit a6de7feea1 gnu: Add python-scprep.
omit bbb849e0b7 gnu: python-fcsparser: Use python-numpy@1.
omit 0f1a5acffe gnu: python-graphtools: Update to 2.1.0.
omit 1e21e3277d gnu: python-pygsp: Update to 0.6.0.
omit 7233484b31 gnu: Add python-pyunlocbox.
omit b34b384794 gnu: python-verde: Update to 1.8.1.
omit 376a456a03 gnu: python-metacells: Simplify.
omit 663f965669 gnu: python-crosshair: Update to 0.0.101.
omit d7ab70675c gnu: Add python-pygls.
omit 4723c0adce gnu: Add python-lsprotocol.
omit 60322b6acd gnu: python-fastcluster: Update to 1.3.0.
omit b3c9f36b26 gnu: python-cvxpy: Update to 1.7.5.
omit b4f19306b7 gnu: python-scs: Update to 3.2.10.
omit 497382c93b gnu: Add scs.
omit 989bc9c306 gnu: python-osqp: Update to 1.0.5.
omit 167b2246c0 gnu: Add osqp.
omit f3e861b0fc gnu: Add qdldl.
omit edb6b6b50c gnu: Remove python-eventio-1.
omit b8d65fa788 gnu: tangos: Update to 1.11.0.
omit c694252eb9 gnu: python-chaospy: Update to 4.3.21.
omit 5c08931ef6 gnu: python-numpoly: Update to 1.3.4.
omit 04644cb733 gnu: python-pyudev: Update to 0.24.4.
omit 7698175520 gnu: python-plotly: Update to 5.24.1.
omit c3b4072081 gnu: Add python-array-api-strict.
omit 2c258097fa gnu: python-ipywidgets: Update to 8.1.4.
omit 3a0c3c7e7b gnu: python-jupyterlab-widgets: Update to 3.0.12.
omit 33baa62a66 gnu: python-vaex-core: Update to 4.19.0.
omit 72e6135e2e gnu: htseq: Update to 2.0.9.
omit 7c403c85c0 gnu: python-coolbox: Update to 0.3.9.
omit 049615178b gnu: python-cooler: Update to 0.10.4.
omit 5106b875b6 gnu: python-circe: Update to 0.3.9.
omit 4d31b58c5d gnu: python-scanpy: Update to 1.11.5.
omit 8bb662c94c gnu: python-statsmodels: Update to 0.14.5.
omit d263c70cad gnu: python-biopython: Update to 1.86.
omit 208847ed6c gnu: python-fbpca: Fix tests.
omit 8ea9df4e7c gnu: python-pandera: Update to 0.27.1.
omit 30337d9d3b gnu: pyscenic: Add missing python-diptest.
omit 7e98ffdc1b gnu: Add python-diptest.
omit 82fd773987 gnu: python-scikit-bio: Update to 0.7.1.post1.
omit 0e004f929e gnu: endgame-singularity: Update to 1.1.
omit 3b87a6b081 gnu: python-biom-format: Update to 2.1.17.
omit 69f482e0dc gnu: Add python-anndata-minimal.
omit ba80b38199 gnu: python-anndata: Update to 0.12.7.
omit 7064fad895 gnu: python-awkward: Update to 2.8.5.
omit 1d69653b9c gnu: python-awkward-cpp: Update to 47.
omit e07a6d4e58 gnu: crossmap: Update to 0.7.3.
omit c0bf3fe234 gnu: python-pynbody: Use python-ipython-minimal for tests.
omit fc74ea568a gnu: python-pycollada: Update to 0.9.2.
omit a4a2b9c63d gnu: python-notebook: Fix build.
omit 628fa0cb6b gnu: Add python-jupyter-client-7.
omit 48cf3ddcaf gnu: python-jupyter-console: Move to jupyter.
omit d0e0167fe4 gnu: python-jupyter-console: Update to 6.6.3.
omit 6ec4115cd8 gnu: python-ipykernel: Update to 7.1.0.
omit 49660ca51c gnu: python-jupyter-client: Update to 8.7.0.
omit 622d640115 gnu: Add python-pytest-jupyter-minimal.
omit 0baa694a04 gnu: Remove python-jupyter-console-minimal.
omit ad14d59a41 gnu: python-jupyter-client: Move to jupyter.
omit 23c480017b gnu: python-jupyter-client: Simplfy bootstrapping.
omit 86223bcd2f gnu: python-jupyter-core: Update to 5.9.1.
omit d804a3285d gnu: python-jupyter-core: Move to jupyter.
omit de03ae06a5 gnu: Add python-ipython-minimal.
omit ccac51e0dd gnu: python-ipython: Update to 9.8.0.
omit a981fe8482 gnu: python-contourpy: Update to 1.3.3.
omit 842a75b4cb gnu: python-pythran: Clean up artifacts.
omit 508cb76ef5 gnu: python-pytest-doctestplus: Update to 1.6.0.
omit 3373b27198 gnu: python-pytest-randomly: Move to python-check.
omit 48afd3b356 gnu: python-pytest-randomly: Update to 4.0.1.
omit 7538f46b56 gnu: python-stcal: Adjust relax-requirments phase.
omit bdeb5780a1 gnu: python-jmespath: Switch to pyproject.
omit 2e8cb7b1b5 gnu: python-specutils: Remove relax-requirements phase.
omit 8ef64739fc gnu: python-asap3: Update to 3.13.10.
omit ce37c85b20 gnu: python-ase: Update to 3.26.0.
omit d7c585bcd8 gnu: urh: Use python-numpy@1.
omit 37cdc670e4 gnu: python-loompy: Update to 3.0.8.
omit cae8ccf23c gnu: python-hnswlib: Update to 0.8.0.
omit b1ee7497dc gnu: python-romancal: Remove relax-requirements phase.
omit 3b712b1fd0 gnu: python-regions: Update to 0.11.
omit 71373fcd4b gnu: python-kalepy: Skip 5 tests.
omit 11654d75e1 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
omit 8fdac8094b gnu: python-numdifftools: Update to 0.9.42.
omit d4d9c8fef9 gnu: python-meshio: Skip some tests.
omit 2cb9576584 gnu: python-lofar-h5plot: Use python-numpy@1.
omit 843837c39e gnu: python-losoto: Update to 2.6.0.
omit 95a79f65a7 gnu: Add python-lofar-parameterset.
omit c0ef1b180d gnu: python-glue-astronomy: Skip 3 tests.
omit a4eec9039e gnu: python-seaborn: Skip 3 tests.
omit d9740cec42 gnu: veusz: Update to 4.2.
omit cc2c2c8687 gnu: websockify: Update to 0.13.0.
omit 60294be185 gnu: python-jwcrypto: Adjust inputs.
omit f2f6ddc711 gnu: python-modin: Update to 0.37.1.
omit ae3a73b740 gnu: python-pyopengl: Skip one test.
omit a2e37deb4e gnu: python-cleanlab: Fix build.
omit 5f715a7ce7 gnu: python-arviz: Update to 0.22.0.
omit 5a28096d0b gnu: python-arboreto: Update to 0.1.6-0.79f916b.
omit 4009ea0c25 gnu: python-naima: Update to 0.10.3.
omit 363ee38b1b gnu: python-xarray-einstats: Update to 0.9.1.
omit a133eebca4 gnu: python-spectral-cube: Update to 0.6.7.
omit 501fcb28cd gnu: python-reproject: Update to 0.19.0.
omit f6cfa8a273 gnu: python-dask-image: Update to 2025.11.0.
omit a54be8f9bc gnu: python-xarray: Update to 2025.12.0.
omit b31da61776 gnu: catch2: Update to 2.13.10.
omit 5922c74fc3 gnu: python-numba: Update to 0.62.1.
omit 9926caa8ce gnu: python-llvmlite: Update to 0.45.0.
omit a365096f70 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
omit a8fe49df89 gnu: python-tables: Update to 3.10.2-0.aad9079.
omit aa18c69c7e gnu: python-annoy: Add python-h5py.
omit d3503d09d8 gnu: cpat: Update to 3.0.5.
omit fef5ca6ae5 gnu: python-linetools: Skip 2 tests.
omit 931bf7b4a5 gnu: python-kanon: Use python-numpy@1.
omit ae1f85cc96 gnu: python-zodipy: Remove relax-requirements phase.
omit b454cf06f4 gnu: python-jacobi: Fix tests.
omit bfa7f48f10 gnu: python-statmorph: Adjust inputs.
omit b8c79890fe gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
omit 507e621c32 gnu: python-scikit-image: Update to 0.25.2.
omit af97e239ad gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
omit 777224e3c8 gnu: python-astrodata: Use python-numpy@1.
omit 2146a67ed6 gnu: python-jwst: Remove relax-requirements phase.
omit caf255db90 gnu: python-gwcs: Remove relax-requirements phase.
omit 38a29751e6 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
omit a3d0520789 gnu: genetic: Use python-pynbody@2.
omit 7fd24fbcc0 gnu: python-esutil: Fix build with gcc-14.
omit aa7e267646 gnu: python-nox: Update to 2025.11.12.
omit e649388fe1 gnu: python-ctapipe: Update to 0.28.0.
omit 0917cc4137 gnu: python-cesium: Update to 0.12.4.
omit d02d6cfb11 gnu: blender: Use python-numpy@1.
omit 2738f7c5e2 gnu: checkm: Update to 1.2.4.
omit 2949116099 gnu: python-blacksheep: Update to 2.4.5.
omit 31ed9eab0e gnu: didjvu: Update to 0.11.0.
omit b2aa2f08c8 gnu: Add python-py3exiv2.
omit 530813cee4 gnu: python-guardpost: Update to 1.0.4.
omit 82bb02adb3 gnu: python-astroml: Fix build.
omit 43128e864d gnu: python-stwcs: Remove relax-requirements phase.
omit 5b5102aff4 gnu: python-cloudpathlib: Fix tests.
omit 426a55f9b0 gnu: python-algopy: Update to 0.7.2.
omit 5afbcac026 gnu: python-dendropy: Update to 5.0.8.
omit e69b0efd24 gnu: python-django-ninja: Update to 1.5.1.
omit 7a42c1af22 gnu: python-xmp-toolkit: Update to 2.1.0.
omit 1a36931a59 gnu: python-astropy-6: Skip some tests.
omit e5fa47f38d gnu: python-fastapi: Update to 0.124.0.
omit b88f06f194 gnu: Add python-pydantic-extra-types.
omit 844dcbc33e gnu: Add python-annotated-doc.
omit 5463e7f617 gnu: Add python-cron-converter.
omit f669ee7141 gnu: Add python-ulid.
omit e39b261f2b gnu: python-casa-formats-io: Fix tests.
omit ea9e534dee gnu: python-pydantic-settings: Update to 2.12.0.
omit 95b1d4aa28 gnu: python-netcdf4: Update to 1.7.2.
omit 35010a0013 gnu: netcdf: Update to 4.9.2.
omit 1f6e4d82a9 gnu: python-blosc2: Update to 3.12.2.
omit 95bd15f732 gnu: c-blosc2: Update to 2.22.0.
omit 1eba52f037 gnu: python-ndindex: Update to 1.10.1.
omit 552986e156 gnu: python-numexpr: Update to 2.14.1.
omit 9bc2fdb29d gnu: python-distributed: Update to 2025.11.0.
omit 819d81da6e gnu: python-scikit-learn: Update to 1.7.2.
omit 0c2d1d021c gnu: python-nbval: Reduce closure size.
omit 6988a9e161 gnu: python-pydantic-2: Deprecate by python-pydantic.
omit d41a97bc78 gnu: Add python-pydantic-1.
omit 87ae29d5e3 gnu: python-pydantic: Update to 2.12.5.
omit 7901e55a77 gnu: python-pydantic-core: Update to 2.41.5.
omit d40d53bdad gnu: Add python-pytest-run-parallel.
omit 3b2f1d22cf gnu: Add python-typing-inspection.
omit e07bda04da gnu: python-dask: Update to 2025.11.0.
omit 3292cdeca3 gnu: python-setuptools-scm-next: Undeprecate.
omit ace0fffbef gnu: python-blosc: Adjust inputs.
omit d83dfbc42b gnu: python-h5py: Update to 3.15.1.
omit 079566f3b4 gnu: python-pytest-regressions: Move to python-check.
omit 8ebefbd30e gnu: python-pytest-regressions: Update to 2.8.3.
omit 1401529e99 gnu: python-scipy: Update to 1.16.3.
omit cb4ae0a22d gnu: python-msgpack: Update to 1.1.2.
omit ec47d8bf7b gnu: python-pandas: Update to 2.3.3.
omit b5cfb3dd30 gnu: python-matplotlib: Update to 3.10.8.
omit 6934413815 gnu: python-httptools: Update to 0.7.1.
omit e5121ac948 gnu: python-numpy-2: Deprecate by python-numpy.
omit fb9714fecc gnu: python-numpy: Set NumPy 2 as default.
omit b14bbfc5fd gnu: Add python-cython-next.
omit 5b62245e6b gnu: python-cython: Update to 3.1.7.
omit 47ebb276e6 gnu: Add python-setuptools-79.
omit ed44363a70 gnu: pythonscad: Improve style.
omit d26fc3d0f7 gnu: pythonscad: Update to 0.8.4.
omit 9ade48d3fc gnu: mkvtoolnix: Update to 97.0
omit c7bded2e4e gnu: gpsd: Switch to Qt6.
omit fca5fe5609 gnu: gpsd: Update to 3.27.3.
omit 1b1f1d2646 gnu: marble-qt: Rename to marble.
omit 6386862477 gnu: libgit2-glib: Update to 1.2.1.
omit 8fae043ed5 gnu: sage: Add missing standard inputs.
omit fbf08dab60 gnu: ddrescue: Update to 1.30.
omit a22cfe1aa2 gnu: wget2: Update to 2.2.1.
omit e9f9ec005f gnu: bmake: Run tests in check phase.
omit 9bab9ce132 gnu: bmake: Update to 20251111.
omit 7967639c80 gnu: asciinema: Update to 3.0.1.
omit a9269b1335 gnu: xiphos: Refresh deprecated input.
omit 7b82042f96 gnu: texlive: Deprecate in favor of texlive-scheme-full.
omit 2a8b9e980f describe: Define and use ‘modules-from-current-profile’.
omit f5fcdbb051 git-authenticate, inferior: Autoload Git modules.
omit ef9248dc42 gnu: libunistring: Resurrect cross-build for MinGW.
omit 65273cb09a gnu: zint: Split Qt GUI into distinct zint-with-qt package.
omit 5161a61db5 gnu: zint: Update to 2.16.0.
omit a771f74098 gnu: guix-modules: Update to 0.3.0.
omit f539769457 system: hurd: Switch to the Shepherd’s system log.
omit 106c61dab2 gnu: hurd: Fix select for streamio.
omit e40f77d022 gnu: gnumach: Don't truncate kernel messages.
omit bcfec3fb29 gnu: clustershell: Update to 1.9.3.
omit 6682362561 gnu: webssh: Update to 1.6.3.
omit a14c7786d5 gnu: webssh: Fix build.
omit f51a0dba1f gnu: python-platypush: Update to 1.3.14.
omit 8a6266d082 gnu: emacs-cape: Update to 2.4.
omit c634710674 gnu: emacs-marginalia: Update to 2.6.
omit ddd18a5bc9 gnu: emacs-lobsters: Update to 1.2.
omit fa26515261 gnu: Add fusion.
omit b297845f5d gnu: kaidan: Update to 0.13.0.
omit 79d3d16066 gnu: qxmpp: Update to 1.12.0.
omit c536810fad gnu: qtkeychain, qtkeychain-qt6: Update to 0.15.0.
omit 992a9e38a7 gnu: python-django: Update to 5.2.9 to fix CVEs.
omit daf91ee1dc gnu: zeal: Remove unreferenced Qt5 input.
omit 47cd67d2e9 gnu: muon: Update to 0.5.0.
omit 2fea1cc791 gnu: imv: Update to 5.0.1.
omit ce70316b6a gnu: netcdf: Remove hdf4 input.
omit 89d632e419 gnu: Remove python-fusepyng.
omit f5a3a313bd gnu: xpra-5: Update to 5.1.4.
omit 45a9098ed6 gnu: libapparmor: Update to 4.1.2.
omit bd2341514c gnu: phonon: Build without Qt5.
omit 9d5e815a43 gnu: Add phonon-qt5.
omit 2fbe364d09 gnu: gnudatalanguage: Remove hdf4 from inputs.
omit 43a38f8f58 gnu: openconnect: Update to 9.12-0-0dcdff8.
omit eb4bec2928 gnu: emacs-ht: Update to 2.4-0.1c49aad.
omit 66d80e9ddf gnu: vlc: Fix build.
omit 023d14bdba gnu: Add taglib-1.
omit 535e8fa717 gnu: strawberry: Update to 1.2.14.
omit 57d8c406e1 gnu: taglib: Update to 2.1.1.
add 4d32b17c19 gnu: sbcl-cl-change-case: Update to 1.0.
add 69aa6ecdba etc: teams: Add MATE team.
add a6e5f1239b gnu: hurd: Add libxcrypt dependency.
add 1804c4f90b gnu: sudo: Add libxcrypt dependency on the Hurd.
add 93e81e1c96 gnu: python-codespell: Update inputs.
add 89e8c55f2b gnu: quickjs-ng: Resolve build issue with x86-32 platform.
add f70ff35ae2 gnu: Add cl-iparse.
add 57b78bcaef gnu: Add polycat.
add 44895f73e7 gnu: Add unity-test.
add 5f974caf64 gnu: iniparser: Update to 4.2.6.
add 7c0d9f6a2c gnu: hyprgraphics: Update to 0.5.0.
add 0c4cbfe0c4 gnu: Add hyprtoolkit.
add 094ab0b8b4 gnu: hyprutils: Update to 0.11.0.
add d38156a795 gnu: Add hyprwire.
add 0932150cf1 gnu: hyprpaper: Update to 0.8.1.
add c3f1640ace gnu: Add hyprland-guiutils.
add c524007dc8 gnu: hyprland: Update to 0.53.1.
add 741738a042 gnu: sbcl-trivial-mimes: Use new repository and homepage
URLs
add 7bc6207a11 gnu: sbcl-trivial-mimes: Update to 1.1.0-3.8b1ea12.
add 43498d3ea1 gnu: xandikos: Fix entry point script.
add 8a2a2a54b5 gnu: emacs-guix: Update to 0.5.2-10.bccba0c.
add ab644ad9ae gnu: sonata: Update to 1.7.3.
add 5379ca9718 gnu: python-pyzmq: Do not run flaky tests.
add fc53f7c831 Revert "gnu: python-pyzmq: Do not run flaky tests."
add 1d455fb8bf tests: install: Fix timezone check.
add 4721bafdad gnu: monero: Update to 0.18.4.5.
add 32c21b83ae gnu: monero-gui: Update to 0.18.4.5.
add f6828ef8b3 gnu: python-hdbscan: Update to 0.8.41.
add 2f3d9566a9 gnu: sbcl-simple-rgb: Add comment on versioning.
add 696b85377d doc: Rename package variants index anchor terms.
add a1e5b01d6d teams: hpc: Adopt parallel module.
add 58da9c2f7e gnu: parallel: Modernize.
add 1a612a9edf gnu: parallel: Build info files.
add 044108d022 gnu: Add libxcrypt-without-failure-tokens.
add cfc5ec77a7 gnu: guile-2.2.4: Fix build by using
libxcrypt-without-failure-tokens.
add 512d49f073 gnu: install-starfive-visionfive2-uEnv.txt: Remove "~%".
add 7782a47f7f gnu: make-u-boot-installer: Use the original file name.
add 9015ab3622 gnu: install-starfive-visionfive2-uEnv.txt: Set extra
options.
add c7951a9566 gnu: linux-libre 6.17-riscv: Enable CONFIG_SCSI_VIRTIO.
add 2cb6948dc2 gnu: visionfive2: Update the module commentary.
add e67189651f guix-install.sh: Make /etc/profile.d/zzz-guix.sh usable in
set -u shells
add 29b168b81a gnu: python-pytorch: Patch Python build.
add a661f9c9d4 teams: hpc: Adopt opencl.
add b8e0abc060 gnu: qemu: Disable failing migration-test on AArch64.
add db49a8c1f3 gnu: ispc: Update to 1.29.1.
add cca0fc99f8 gnu: ispc: Refresh package.
add 0fb6feed2c gnu: lc0: Update dependency on onednn.
add 91f1db6186 gnu: rust-crates: Add ‘package:’ prefix for replaced crates.
add 01b97dff35 import: crate: Generate comments with ‘TODO REVIEW:’ prefix.
add cd86148bf3 teams: Add cnx to team sysadmin.
add ecd597ab52 gnu: emacs-shell-maker: Update to 0.84.7.
add e610fa5557 gnu: Add emacs-acp.
add aa6add1ca8 gnu: Add emacs-agent-shell.
add 1fc556b686 import: elpa: Fix repo url for melpa git recipes.
add fbb160cb0e gnu: emacs-org-node: Update to 3.12.1.
add f8e440518f gnu: emacs-guix: Update to 0.6.1.
add f3d48e6024 gnu: emacs-all-the-icons: Update to 5.0.0-0.4778632.
add bf2636df4f gnu: emacs-all-the-icons-dired: Update to 2.0-0.e157f06.
add 1c477aea8d gnu: emacs-dumb-jump: Update to 0.5.4-0.1ff02c7.
add 811ee1ab9f import: nuget: Add tests and documentation.
add 71e1787a35 import: nuget: Fix bug in version spec parsing.
add 1ed700f8f9 gnu: Add libsquish.
add f3f90bbbce gnu: vcmi: Update to 1.7.1.
add ae83e93c42 gnu: openttd-opengfx: Update to 8.0.
add 7d62c05d21 gnu: openttd-engine: Update to 15.0.
add acb2ca2712 gnu: emacs-paren-face: Update to 1.2.3.
add 2a9e61ba60 gnu: Add collada-dom.
add 0e743dcde1 gnu: bullet: Enable multithreading.
add 48178b1ed7 gnu: mygui-gl: Disable deprecated code compilation.
add e331d1abdf gnu: openscenegraph: Add collada-dom to inputs.
add edb30c4b54 gnu: openmw-openscenegraph: Update to ff19a670.
add 3cbaaa77cd gnu: openmw: Update to 0.50.0.
add c0c184a0c7 gnu: openscenegraph: Drop the labels for inputs.
add d48e1c7196 services: <greetd-terminal-configuration>: Default
initial-session-command to (greetd-user-session).
add 1c1c9e1398 gnu: trealla: Update to 2.88.4.
add fee676c728 gnu: Add icu4c-78.
add c65c25e82b gnu: Remove icu4c-71.
add c746f8e06e gnu: Remove icu4c-75.
add 7fec4d42e5 gnu: nss-rapid: Update to 3.119.1.
add 679e30988b gnu: firefox-l10n: Update to
da03d1507bcec6952b788a21f3cfa95673b1da4c.
add 2c34e9ccb6 gnu: librewolf: Update to 147.0.1-3 [security-fixes].
add 6a483ed7c6 gnu: collectd: Enable more plugins.
add 11f9ab1d82 gnu: python-jupytext: Fix tests.
add d97cbcb4ad gnu: sbcl-cl-posix-mqueue: Update to 0.1.3.
add 7061beccb2 gnu: sbcl-cl-posix-mqueue: Format to modern style for all
inputs.
add 2f1be81280 gnu: Add clasp-list-named-class.
add 4e2de18be2 gnu: trealla: Update to 2.89.1.
add 864d15bd08 gnu: taglib: Update to 2.1.1.
add d04cf2533e gnu: strawberry: Update to 1.2.14.
add 8e7d7e089c gnu: Add taglib-1.
add bf9ff2c42e gnu: vlc: Fix build.
add 9da529f150 gnu: emacs-ht: Update to 2.4-0.1c49aad.
add 2944e4c7ee gnu: openconnect: Update to 9.12-0-0dcdff8.
add 4e85e37372 gnu: gnudatalanguage: Remove hdf4 from inputs.
add e69450b105 gnu: Add phonon-qt5.
add bf1d5406e5 gnu: phonon: Build without Qt5.
add f3e0d55ad0 gnu: libapparmor: Update to 4.1.2.
add 8e56004e12 gnu: xpra-5: Update to 5.1.4.
add 4a99d97082 gnu: Remove python-fusepyng.
add 8682fec172 gnu: netcdf: Remove hdf4 input.
add 2f8557a710 gnu: imv: Update to 5.0.1.
add fa0e9e0008 gnu: muon: Update to 0.5.0.
add 14a687789d gnu: zeal: Remove unreferenced Qt5 input.
add 70fcd644e9 gnu: python-django: Update to 5.2.9 to fix CVEs.
add 17af41c93a gnu: qtkeychain, qtkeychain-qt6: Update to 0.15.0.
add 48194b0bdf gnu: qxmpp: Update to 1.12.0.
add d7e3106696 gnu: kaidan: Update to 0.13.0.
add fc9829ea66 gnu: Add fusion.
add d695b30a16 gnu: emacs-lobsters: Update to 1.2.
add 295b03a0e1 gnu: emacs-marginalia: Update to 2.6.
add 868efdba06 gnu: emacs-cape: Update to 2.4.
add 436f4d6781 gnu: python-platypush: Update to 1.3.14.
add a57d118d7d gnu: webssh: Fix build.
add 1136d91212 gnu: webssh: Update to 1.6.3.
add 62651b54df gnu: clustershell: Update to 1.9.3.
add 4a7a397bfa gnu: gnumach: Don't truncate kernel messages.
add 8c4e05c771 gnu: hurd: Fix select for streamio.
add 048385a09a system: hurd: Switch to the Shepherd’s system log.
add 9c2b889e22 gnu: guix-modules: Update to 0.3.0.
add ee0035963b gnu: zint: Update to 2.16.0.
add 3a3c560aad gnu: zint: Split Qt GUI into distinct zint-with-qt package.
add e6f84b7aed gnu: libunistring: Resurrect cross-build for MinGW.
add 2f2b9bda93 git-authenticate, inferior: Autoload Git modules.
add 7f923c8efe describe: Define and use ‘modules-from-current-profile’.
add e1a0692e66 gnu: texlive: Deprecate in favor of texlive-scheme-full.
add 0f2d9765af gnu: xiphos: Refresh deprecated input.
add 3414eff7f0 gnu: asciinema: Update to 3.0.1.
add 52574accc1 gnu: bmake: Update to 20251111.
add 167829ebf3 gnu: bmake: Run tests in check phase.
add 3879685625 gnu: wget2: Update to 2.2.1.
add eb21b3e556 gnu: ddrescue: Update to 1.30.
add 48c37d257c gnu: sage: Add missing standard inputs.
add 7917f2eece gnu: libgit2-glib: Update to 1.2.1.
add dd9f0a6de1 gnu: marble-qt: Rename to marble.
add a725864db1 gnu: gpsd: Update to 3.27.3.
add ec43b86cb1 gnu: gpsd: Switch to Qt6.
add 53dbc7b1b3 gnu: mkvtoolnix: Update to 97.0
add 5ffdcac56a gnu: pythonscad: Update to 0.8.4.
add d7f7cff8e6 gnu: pythonscad: Improve style.
add b3072f4bfe gnu: Add python-setuptools-79.
add 62a1bc0a2d gnu: python-cython: Update to 3.1.7.
add e642672eb1 gnu: Add python-cython-next.
add 34bd374da7 gnu: python-numpy: Set NumPy 2 as default.
add 4053bb816f gnu: python-numpy-2: Deprecate by python-numpy.
add 93c4e8653c gnu: python-httptools: Update to 0.7.1.
add c49dc0f87f gnu: python-matplotlib: Update to 3.10.8.
add d37ec2cbcc gnu: python-pandas: Update to 2.3.3.
add ec7fdab13c gnu: python-msgpack: Update to 1.1.2.
add 9b93ceda7c gnu: python-scipy: Update to 1.16.3.
add 0b0441a53c gnu: python-pytest-regressions: Update to 2.8.3.
add 339bf34a7b gnu: python-pytest-regressions: Move to python-check.
add 9f33c1496d gnu: python-h5py: Update to 3.15.1.
add fb8388ec66 gnu: python-blosc: Adjust inputs.
add e35316d5d9 gnu: python-setuptools-scm-next: Undeprecate.
add 18223f332c gnu: python-dask: Update to 2025.11.0.
add fca8483ba1 gnu: Add python-typing-inspection.
add cefb2a94c3 gnu: Add python-pytest-run-parallel.
add f3c788646a gnu: python-pydantic-core: Update to 2.41.5.
add 71aedf1eb3 gnu: python-pydantic: Update to 2.12.5.
add 2122702d4d gnu: Add python-pydantic-1.
add f0cfdce4de gnu: python-pydantic-2: Deprecate by python-pydantic.
add 0980a62f44 gnu: python-nbval: Reduce closure size.
add 9cc2b80c5e gnu: python-scikit-learn: Update to 1.7.2.
add 2b4bbd4257 gnu: python-distributed: Update to 2025.11.0.
add 14454fec8c gnu: python-numexpr: Update to 2.14.1.
add 8fa8eedcdc gnu: python-ndindex: Update to 1.10.1.
add aa43e19efa gnu: c-blosc2: Update to 2.22.0.
add d5ee559500 gnu: python-blosc2: Update to 3.12.2.
add 9cb32ac175 gnu: netcdf: Update to 4.9.2.
add 877eedc68b gnu: python-netcdf4: Update to 1.7.2.
add 0540053002 gnu: python-pydantic-settings: Update to 2.12.0.
add 9d39ada53f gnu: python-casa-formats-io: Fix tests.
add d249ed5654 gnu: Add python-ulid.
add e44096d76e gnu: Add python-cron-converter.
add f0ddabf9f8 gnu: Add python-annotated-doc.
add c6843ac99e gnu: Add python-pydantic-extra-types.
add 9044b3443d gnu: python-fastapi: Update to 0.124.0.
add 1eab1b8941 gnu: python-astropy-6: Skip some tests.
add d8fc1951ce gnu: python-xmp-toolkit: Update to 2.1.0.
add b172e70b7c gnu: python-django-ninja: Update to 1.5.1.
add e32cefec99 gnu: python-dendropy: Update to 5.0.8.
add 584d921d7a gnu: python-algopy: Update to 0.7.2.
add f2e9018613 gnu: python-cloudpathlib: Fix tests.
add eda6c32c53 gnu: python-stwcs: Remove relax-requirements phase.
add d2dce1a2f7 gnu: python-astroml: Fix build.
add 3a73b0aeef gnu: python-guardpost: Update to 1.0.4.
add bc04e9020e gnu: Add python-py3exiv2.
add 19c1fe40fa gnu: didjvu: Update to 0.11.0.
add 7e4e0f4106 gnu: python-blacksheep: Update to 2.4.5.
add 07926f66da gnu: checkm: Update to 1.2.4.
add 098e7dc83b gnu: blender: Use python-numpy@1.
add b0d6401bd1 gnu: python-cesium: Update to 0.12.4.
add 08611ac65f gnu: python-ctapipe: Update to 0.28.0.
add f0460c62fe gnu: python-nox: Update to 2025.11.12.
add 388794d1f5 gnu: python-esutil: Fix build with gcc-14.
add ba87ede3e6 gnu: genetic: Use python-pynbody@2.
add 66afe79663 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
add 328d430a3b gnu: python-gwcs: Remove relax-requirements phase.
add f862c19301 gnu: python-jwst: Remove relax-requirements phase.
add 0862eea926 gnu: python-astrodata: Use python-numpy@1.
add c4fdb72f83 gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
add 4b62bdcd26 gnu: python-scikit-image: Update to 0.25.2.
add f113b7a0f4 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
add da6d767b23 gnu: python-statmorph: Adjust inputs.
add d3a5317ee1 gnu: python-jacobi: Fix tests.
add acbd224400 gnu: python-zodipy: Remove relax-requirements phase.
add 6393da11c7 gnu: python-kanon: Use python-numpy@1.
add 527c35ef26 gnu: python-linetools: Skip 2 tests.
add 3e0a748205 gnu: cpat: Update to 3.0.5.
add bcff82fe0b gnu: python-annoy: Add python-h5py.
add ee2f6e9da6 gnu: python-tables: Update to 3.10.2-0.aad9079.
add 9cac038e7d gnu: pyscenic: Update to 0.12.1-2.06bafba4.
add 7b1000d78c gnu: python-llvmlite: Update to 0.45.0.
add d6674d95d6 gnu: python-numba: Update to 0.62.1.
add 549921ad32 gnu: catch2: Update to 2.13.10.
add 615d532f4d gnu: python-xarray: Update to 2025.12.0.
add 7e19277504 gnu: python-dask-image: Update to 2025.11.0.
add 748d873b1e gnu: python-reproject: Update to 0.19.0.
add 95b46c6acc gnu: python-spectral-cube: Update to 0.6.7.
add 4ac66038b7 gnu: python-xarray-einstats: Update to 0.9.1.
add c1fbb20147 gnu: python-naima: Update to 0.10.3.
add a9b4044888 gnu: python-arboreto: Update to 0.1.6-0.79f916b.
add 13ba662e3d gnu: python-arviz: Update to 0.22.0.
add c2eb9dc7d4 gnu: python-cleanlab: Fix build.
add 837af9fedf gnu: python-pyopengl: Skip one test.
add 88490f0ae9 gnu: python-modin: Update to 0.37.1.
add fa250a599d gnu: python-jwcrypto: Adjust inputs.
add 146eff4a24 gnu: websockify: Update to 0.13.0.
add dfa15961b1 gnu: veusz: Update to 4.2.
add 93738ee4f2 gnu: python-seaborn: Skip 3 tests.
add d2b193d835 gnu: python-glue-astronomy: Skip 3 tests.
add 832efa5105 gnu: Add python-lofar-parameterset.
add dc83f42bb7 gnu: python-losoto: Update to 2.6.0.
add bff06d124b gnu: python-lofar-h5plot: Use python-numpy@1.
add 7bbdeda623 gnu: python-meshio: Skip some tests.
add 698b4a5f71 gnu: python-numdifftools: Update to 0.9.42.
add 8493deb83b gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
add f9615220f4 gnu: python-kalepy: Skip 5 tests.
add 56897a140f gnu: python-regions: Update to 0.11.
add f32bce6f14 gnu: python-romancal: Remove relax-requirements phase.
add c6f3d2408d gnu: python-hnswlib: Update to 0.8.0.
add 9565866f53 gnu: python-loompy: Update to 3.0.8.
add c1dff419b9 gnu: urh: Use python-numpy@1.
add b4db3027b5 gnu: python-ase: Update to 3.26.0.
add 4657c8faa7 gnu: python-asap3: Update to 3.13.10.
add 0fcb9a5c77 gnu: python-specutils: Remove relax-requirements phase.
add 4e02ef086b gnu: python-jmespath: Switch to pyproject.
add 32a1fa29f7 gnu: python-stcal: Adjust relax-requirments phase.
add 63cdb8d1dd gnu: python-pytest-randomly: Update to 4.0.1.
add 6583eb96fc gnu: python-pytest-randomly: Move to python-check.
add de70860f82 gnu: python-pytest-doctestplus: Update to 1.6.0.
add c905ae222b gnu: python-pythran: Clean up artifacts.
add ed09482810 gnu: python-contourpy: Update to 1.3.3.
add bde5ddfb35 gnu: python-ipython: Update to 9.8.0.
add 087b10410c gnu: Add python-ipython-minimal.
add 05f293044a gnu: python-jupyter-core: Move to jupyter.
add 0540cdbbfc gnu: python-jupyter-core: Update to 5.9.1.
add 954eb4d3ee gnu: python-jupyter-client: Simplfy bootstrapping.
add ac9f0d0479 gnu: python-jupyter-client: Move to jupyter.
add ff58f4e828 gnu: Remove python-jupyter-console-minimal.
add 733c89e76f gnu: Add python-pytest-jupyter-minimal.
add 4af0bd2d29 gnu: python-jupyter-client: Update to 8.7.0.
add 920797fd42 gnu: python-ipykernel: Update to 7.1.0.
add 03fce356a0 gnu: python-jupyter-console: Update to 6.6.3.
add 4c07d24d70 gnu: python-jupyter-console: Move to jupyter.
add bf32be32ec gnu: Add python-jupyter-client-7.
add 726f7c7692 gnu: python-notebook: Fix build.
add b5d880ed8d gnu: python-pycollada: Update to 0.9.2.
add 0725102f61 gnu: python-pynbody: Use python-ipython-minimal for tests.
add 40dafe9df2 gnu: crossmap: Update to 0.7.3.
add 558b9f08f1 gnu: python-awkward-cpp: Update to 47.
add f2fcf15e45 gnu: python-awkward: Update to 2.8.5.
add 28b333f87c gnu: python-anndata: Update to 0.12.7.
add 854be1f72c gnu: Add python-anndata-minimal.
add 22716fbe6f gnu: python-biom-format: Update to 2.1.17.
add 4d0abd23fd gnu: endgame-singularity: Update to 1.1.
add feaaf136ef gnu: python-scikit-bio: Update to 0.7.1.post1.
add 087ff3518d gnu: Add python-diptest.
add 7fb914f6ac gnu: pyscenic: Add missing python-diptest.
add c3c0de496e gnu: python-pandera: Update to 0.27.1.
add 32cb02db22 gnu: python-fbpca: Fix tests.
add a3874b7816 gnu: python-biopython: Update to 1.86.
add f5eaffb07c gnu: python-statsmodels: Update to 0.14.5.
add 640973f9c4 gnu: python-scanpy: Update to 1.11.5.
add 7c10b19def gnu: python-circe: Update to 0.3.9.
add 43908b02f7 gnu: python-cooler: Update to 0.10.4.
add 069eb8d324 gnu: python-coolbox: Update to 0.3.9.
add 9822ee1aaf gnu: htseq: Update to 2.0.9.
add 396686ebc8 gnu: python-vaex-core: Update to 4.19.0.
add f0d096df8a gnu: python-jupyterlab-widgets: Update to 3.0.12.
add f7778817dc gnu: python-ipywidgets: Update to 8.1.4.
add 12caa7a7d0 gnu: Add python-array-api-strict.
add a0c3a2632c gnu: python-plotly: Update to 5.24.1.
add 11981b0d21 gnu: python-pyudev: Update to 0.24.4.
add 2f02ed5b00 gnu: python-numpoly: Update to 1.3.4.
add 581f5b2bf3 gnu: python-chaospy: Update to 4.3.21.
add 43292f1124 gnu: tangos: Update to 1.11.0.
add 8e7249553f gnu: Remove python-eventio-1.
add 896118913a gnu: Add qdldl.
add c4c88fd251 gnu: Add osqp.
add ef4cae7468 gnu: python-osqp: Update to 1.0.5.
add 6695a1ecba gnu: Add scs.
add 6d81eb8f6a gnu: python-scs: Update to 3.2.10.
add e9a5236f62 gnu: python-cvxpy: Update to 1.7.5.
add 8bf66eb934 gnu: python-fastcluster: Update to 1.3.0.
add 17cf15aa25 gnu: Add python-lsprotocol.
add aaf435818d gnu: Add python-pygls.
add 4b138ea01c gnu: python-crosshair: Update to 0.0.101.
add d2f3f13873 gnu: python-metacells: Simplify.
add a3520cea9b gnu: python-verde: Update to 1.8.1.
add 7856fceb31 gnu: Add python-pyunlocbox.
add 510480a7ec gnu: python-pygsp: Update to 0.6.0.
add 60e80c439c gnu: python-graphtools: Update to 2.1.0.
add ed6d94d437 gnu: python-fcsparser: Use python-numpy@1.
add dc44a54df7 gnu: Add python-scprep.
add 78773bf10d gnu: python-magic-impute: Update to 3.0.0.
add a3f40acb87 gnu: python-cooltools: Update to 0.7.1.
add edb9b9ec88 gnu: python-cnmf: Update to 1.7.0.
add 4113323a93 gnu: idr: Fix build.
add 76ee5c0a5c gnu: mageck: Use python-numpy@1.
add 3004634006 gnu: python-captum: Update to 0.8.0-0.4fade3a.
add 00d46432d2 gnu: python-cellbender: Update to 0.3.2.
add 9d0c0fbef5 gnu: macs-3: Update to 3.0.3.
add a1899bf5d0 gnu: python-brian2: Update to 2.10.1.
add a013420837 gnu: python-presto: Improve package, fix tests.
add 27d5334f0c gnu: Add python-apricot-select.
add 4e62565c96 gnu: python-pomegranate: Update to 1.1.0.
add a3637e0170 gnu: python-pomegranate: Move to machine-learning.
add 16ccbfc2fe gnu: python-pyfaidx: Update to 0.9.0.3.
add e60090e7f6 gnu: cnvkit: Update to 0.9.12-0.52f367b.
add a335ce1224 gnu: piglit: Use python-numpy@1.
add f4b424bd3a gnu: python-tdda: Skip one more test.
add 6f4ed682c7 gnu: python-deepdish: Use python-numpy@1.
add a00320576e gnu: python-deeptools: Update to 3.5.6.
add 92c7352529 gnu: python-funsor: Update to 0.4.6.
add b84be773d5 gnu: python-mygene: Switch to pyproject.
add 89cef8768a gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
add 244a578be3 gnu: Add python-stregion.
add 2ac335b3a3 gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
add ca9a0b38f2 gnu: python-gizmo-analysis: Remove relax-requirements phase.
add ae2ad97fa3 gnu: python-sep: Remove relax-requirements phase.
add f6e47165dd gnu: python-sncosmo: Adjust phases.
add 210f141bb8 gnu: python-specreduce: Remove relax-requirements phase.
add a9773c491b gnu: python-utilities-awetzel: Remove relax-requirements
phase.
add 47dfedfdc4 gnu: python-episcanpy: Use python-numpy@1.
add c34ab1ebd5 gnu: python-fenics-ufl-2019: Use python-numpy@1.
add 45146d392d gnu: python-fenics-ffc: Use python-numpy@1.
add cd99a69c82 gnu: Add python-xarray-dataclass.
add ba7ea19649 gnu: python-multiscale-spatial-image: Update to 2.0.3.
add 88ede6f11a gnu: Remove python-xarray-datatree.
add b2dabbc3fd gnu: python-glue-qt: Relax requirements for ipython version.
add 9e237e43c7 gnu: python-papermill: Reduce closure size; skip 2 tests.
add 58213b3a3f gnu: python-vector: Update to 1.7.0.
add d344e67d89 gnu: python-scikit-learn-1.6: Skip 3 more tests.
add 66ba4a59fe gnu: boost-numpy: Use python-numpy@1.
add 97c8ce9749 gnu: rdkit: Use python-numpy@1.
add 4525c82479 gnu: python-paramz: Use python-numpy@1.
add a57ca64d9c gnu: python-gpy: Use python-numpy@1.
add a3bff79259 gnu: python-paramz Move to machinve-learning.
add 8168b8aff8 gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3.
add e743c227b5 gnu: python-spisea: Use python-numpy@1.
add dafece4b93 gnu: python-scikit-surprise: Use python-numpy@1.
add ecd70fa46e gnu: Add python-statannotations.
add 0fc6bac223 gnu: dolphin-emu: Use python-numpy@1.
add 9b79f9a630 gnu: coda: Use python-numpy@1.
add 99de780e26 gnu: python-dcor: Use python-numpy@1.
add 8b7c437222 gnu: python-hdf5storage: Use pythno-numpy@1.
add ce6dfab67b gnu: python-hic2cool: Fix tests.
add d4359aac15 gnu: scvelo: Update to 0.3.3.
add 7387fc7d91 gnu: python-sbpy: Skip one doc test.
add 3f38e62f74 gnu: pigx-scrnaseq: Use python-numpy@1.
add a0d572b1ec gnu: python-hicmatrix: Update to 17.2.
add 8a44ede753 gnu: python-pygenometracks: Update to 3.9.
add b6e8862748 gnu: python-pyamg: Update to 5.3.0.
add 2b619edbea gnu: python-muon: Use python-numpy@1.
add e2895cc9d9 gnu: python-salib: Update to 1.5.2.
add a855cfbf4a gnu: python-pyfma: Use python-numpy@1.
add eb7eebb008 gnu: python-accupy: Use python-numpy@1.
add 4d94df7d02 gnu: python-quadpy: Use python-numpy@1.
add d32c9544cf gnu: python-imagecodecs: Fix build.
add b45dda9344 gnu: python-libneuroml: Update to 0.6.7.
add d41ab16bf8 gnu: python-watchfiles: Update to 1.1.1.
add c0efc8c199 gnu: Add python-narwhals-minimal.
add a68d68a8b9 gnu: python-narwhals: Update to 2.15.0.
add 00fb9fdd68 gnu: python-pyreadstat: Update to 1.3.2.
add a866170e7f gnu: python-pypika-tortoise: Update to 0.6.3.
add e231bfb707 gnu: python-tortoise-orm: Update to 0.25.3.
add 55384ce646 gnu: python-hyperopt: Fix build.
add f9dcefca27 gnu: python-iced: Update to 0.6.0.
add d2395923a6 gnu: python-decoupler: Update to 2.1.2.
add 39ac191ff7 gnu: python-liana-py: Update to 1.6.1.
add 4cd1ce7b26 gnu: python-pandas-stubs: Update to 2.3.3.251219.
add 01c678f13d gnu: python-pytoolconfig: Reduce closure size.
add 980a90e19e gnu: python-lifelines: Simplify tests.
add 9aff0c31fe gnu: python-pysm3: Relax requirements for NumPy and SciPy.
add 7d15cd29d2 gnu: python-mathics-core: Use python-numpy@1.
add 647f79490a gnu: python-metpy: Update to 1.7.1.
add c6dea11043 gnu: python-numpysane: Use python-numpy@1.
add 490cb0c441 gnu: python-orthopy: Use python-numpy@1.
add cd7a1a50bd gnu: Add python-uuid6.
add fd3fcd18a8 gnu: python-deepdiff: Update to 8.6.1.
add abd3567113 gnu: python-pandapower: Update to 3.3.0.
add 1433726a18 gnu: python-peaks2utr: Use python-numpy@1.
add b069052a5a gnu: python-perfplot: Use python-numpy@1.
add 117ec5bfc6 gnu: Remove python-statannot.
add 86f6f29dfd gnu: Remove python-watchgod.
add 85cfa28f4b gnu: Remove python-webbpsf.
add 2703fec25e gnu: Remove ginga-qt5.
add 09274fbc5c gnu: Remove fanc.
add d9d182120d gnu: openmm: Update to 8.4.0.
add 0230ecdbad gnu: Remove python-dask-expr.
add 2346df813e gnu: python-scikit-survival: Update to 0.26.0.
add 5e2daaf995 gnu: python-scikit-survival: Fix indentation.
add 4e12abfc60 gnu: python-phenograph: Fix tests.
add a4dfc97b06 gnu: python-pingouin: Fix tests.
add 775282cea6 gnu: python-pot: Update to 0.9.6.post1.
add 3b7e8b5d27 gnu: python-pyemd: Use python-numpy@1.
add a9f599705f gnu: python-pygam: Update to 0.12.0.
add b554be84d1 gnu: python-fastparquet: Update to 2025.12.0.
add 6d630e6b06 gnu: python-pytensor: Update to 2.36.3.
add e0f28a000f gnu: python-pymc: Update to 5.27.0.
add 09ce0dde5b gnu: openmm: Remove shaky tests.
add 85cd716156 gnu: python-pymol: Use python-numpy@1.
add 0cf11223f6 gnu: Add c-stdaux.
add 578661549f gnu: Add c-siphash.
add f626da074d gnu: Add python-siphash24.
add e8ad519b19 gnu: python-pytools: Add missing propagated inputs, enable
tests.
add 155e793b0f gnu: python-nanobind: Update to 2.10.2.
add 0a29f178b6 gnu: python-pyopencl: Update to 2026.1.
add 45639ee51b gnu: python-pysat: Skip more tests.
add 59d2b75e54 gnu: python-statmorph: Use python-numpy@1.
add 41e90b9fb3 gnu: python-petrofit: Reduce closure size.
add 963313fa22 gnu: python-qutip: Update to 5.2.2.
add 6149a5167b gnu: Remove music21.
add d7073216e7 gnu: python-cylp: Update to 0.94.0.
add 14ede3c201 gnu: python-timezonefinder: Use python-numpy@1.
add 3f5d6171f2 gnu: python-mysql-connector-python: Skip one more test.
add ba4fd3d976 gnu: python-genomepy: Update to 0.16.3.
add 0ac053d0c0 gnu: Remove python-aioredis.
add ce56d53c2d gnu: Remove python-pynbody-1.
add 20c35b20c3 gnu: python-sphinx-autodoc-typehints: Update to 2.3.0.
add 70c1294971 gnu: python-coolbox: Fix inputs.
add 29e6768621 gnu: scregseg: Skip 'sanity-check phase.
add 95694c28f6 gnu: python-drep: Skip additional test.
add 9d3a8fd9b1 gnu: python-pgmpy: Ignore flaky tests.
add c76d544261 gnu: python-pyts: Update to 0.13.0-0.4f3d97b.
add 6863008004 gnu: python-pyvista: Ignore failing test.
add 3aeff6c495 gnu: python-daemon: Replace python-lockfile by
python-filelock.
add 88ac4f61e5 gnu: python-cachecontrol: Remove python-lockfile
propagated-input.
add bf7bea493b gnu: duplicity: Remove python-lockfile propagated-input.
add 8a156ad99c build-system: python: Accept pyproject
package-with-explicit-python.
add f837d983a8 gnu: python2-pycparser: Migrate to pyproject and decouple.
add 84fbf59c47 gnu: python2-cffi: Migrate to pyproject and decouple.
add 15ce7c480a gnu: python2-cffi: Move to (gnu packages pypy).
add 293c68927f gnu: python2-pycparser: Move to (gnu packages pypy).
add eb5d9d5f2a gnu: kapidox: Switch to pyproject.
add 391981aa40 gnu: xpra: Switch to pyproject.
add 256a1ce13c gnu: qspectrumanalyzer: Switch to pyproject.
add 54f1ec3a77 gnu: pass-rotate: Switch to pyproject.
add c5e5b9fbf0 gnu: jupyter: Switch to pyproject.
add 367ca6685e gnu: python-ipydatawidgets: Switch to pyproject.
add d02f7eb49c gnu: fp16: Switch to pyproject.
add b1531bfa77 gnu: quodlibet: Switch to pyproject.
add b419f48ae3 gnu: z3: Switch to pyproject.
add 18d7fd0d0d gnu: python-django-allauth: Update to 65.13.1.
add bc8b7ec726 gnu: m8c: Update to 2.2.2.
add 2186eb7825 gnu: magic: Update to 8.3.590.
add 63842aa963 gnu: python-crossenv: Update to 1.6.1.
add 03c78b3cb5 gnu: python-jinja2-time: Switch to pyproject.
add 7c8d3fce11 gnu: python-notify2: Switch to pyproject.
add 86a386aac6 gnu: python-pebble: Update to 5.1.3.
add c9af46e2f4 gnu: python-emoji-for-gh-md-to-html: Switch to pyproject.
add ea7d251ec7 gnu: python-jellyfish: Update to 1.2.1.
add 6b52e46a39 gnu: python-pypeg2: Switch to pyproject.
add 9a8ccbb765 gnu: python-jinja2-time: Disable tests.
add df9327e873 gnu: python-pyinotify: Switch to pyproject.
add c2415b8c77 gnu: python-dbusmock: Update to 0.37.2.
add cefb21722e gnu: Add python-unicode-linebreak.
add abad8f4265 gnu: Add python-md-ulb-pwrap.
add 54a7533bdc gnu: Add python-importlib-metadata-argparse-version.
add e05ab4ff2f gnu: python-pymd4c: Update to 1.3.0.
add 4e741b53ca gnu: mdpo: Update to 2.1.4.
add 89f53438f4 gnu: mkbootimg: Switch to copy-build-system.
add 097decc411 gnu: python-libevdev: Update to 0.13.1.
add fff554ba6c gnu: gnome-plots: Switch to pyproject.
add 771e8a9d35 gnu: python-pyinotify: Reduce package closure size.
add 3ba34496c2 gnu: temper-exporter: Switch to pyproject.
add 8b14074920 gnu: patatt: Switch to pyproject.
add ee60b35479 gnu: python-biothings-client: Update to 0.4.1.
add 6aa18362bd gnu: shirah: Switch to pyproject.
add eea23cc9ca gnu: grokmirror: Update to 2.0.12.
add 8602c93638 gnu: nml: Switch to pyproject.
add dbc6585282 gnu: python-domain-connect: Remove unused inputs.
add c02471934b gnu: python-scanrbp: Include data in package.
add 2ec11c4ebf gnu: python-brian2tools: Fix build.
add d93de53d8b gnu: python-sphinx-autoapi: Update to 3.6.1.
add d0669bc5e3 gnu: Remove hdf-eos2.
add 38f697f154 gnu: Remove hdf-eos5.
add 41ab5007ca gnu: Remove gctp.
add eebd4aa8d4 gnu: Remove python-hdf4.
add 8106900960 gnu: Remove python-pyhdf.
add 7f3f6cfdb7 gnu: hdf4-alt: Disinherit from hdf4.
add 6226af3e9e gnu: Remove hdf4.
add 07464b8a85 gnu: coda: Remove hdf4 input.
add adbc61ecf4 gnu: Remove hdf4-alt.
add b5ab02eada tests: Adjust to Guile 3.0.10+.
add ceaf4c4ead gnu: guile: Add 3.0.11.
add 93f06c60ee gnu: Bump rocm to version 7.1.0
add bda579fbca gnu: python-xsge: Switch to pyproject.
add be6ce4b032 gnu: calibre: Update to 8.16.2.
add a42c00f2dc gnu: python-geosketch: Update to 1.3.
add 13a422138c gnu: python-ruffus: Switch to pyproject.
add 30ed0a8ec1 gnu: weechat-wee-slack: Update to 2.11.0.
add e0fae5a88e gnu: python-librecaptcha: Switch to pyproject.
add cfc39fd067 gnu: terminator: Switch to pyproject.
add d1d377aa94 gnu: python-pygame: Update to 2.6.1.
add cbf33acfcc gnu: python-jsonnet: Switch to pyproject.
add a7764f2686 gnu: assword: Rename to impass.
add b8af701a1c gnu: python-tmx: Switch to pyproject.
add eceb21d25f gnu: python-liana-py: Don't propagate python-numpydoc.
add e51db1ef93 gnu: python-pynetdicom: Don't propagate python-numpydoc.
add 5cdbebdb8d gnu: python-scikit-misc: Don't propagate python-numpydoc.
add c8c4af1330 gnu: fastfetch-minimal: Update to 2.57.0
add a1ea034b50 gnu: quodlibet: Fix operon GI path.
add 731c01d9db gnu: Add go-github-com-lmittmann-tint.
add e6e74c4070 gnu: darkman: Update to 2.3.0.
add 17d68bfa87 gnu: Add python-flask-paginate.
add 85c13d6b42 gnu: libcap-ng: Update to 0.9.
add 0676426612 gnu: libxapp: Switch to pyproject.
add aec536e39d gnu: python-xapp: Drop uneeded arguments.
add f1ba51040a gnu: gemmi: Switch to pyproject.
add 4ab7392b92 gnu: createrepo-c: Switch to pyproject.
add 7109ad59af gnu: rdkit: Switch to pyproject.
add d38098db80 gnu: electron-cash: Switch to pyproject.
add f4f4b02f34 gnu: sugar: Switch to pyproject.
add b3b4c43661 gnu: sugar-datastore: Switch to pyproject.
add 2277a2b6b3 gnu: hplip: Switch to pyproject.
add fb7239c97d gnu: h-client: Switch to pyproject.
add 9e01216593 gnu: python-pandas-flavor: Update to 0.8.1.
add c907022778 gnu: python-pyjanitor: Update to 0.32.5.
add 69ef12d9f5 gnu: python-celery: Fix build on CI.
add 8385663958 gnu: python-click-plugins-1: Add a maintenance note.
add 2e52cc7624 gnu: python-kombu: Update to 5.6.0.
add a83699b837 gnu: python-celery: Update to 5.6.2.
add 9101d71595 gnu: ringdecomposerlib: Switch to pyproject.
add 1253eab06c gnu: gmsh: Switch to pyproject.
add 358bebbe80 gnu: syncplay: Switch to pyproject.
add 61678a35bb gnu: flair: Switch to pyproject.
add 3256a25f8d gnu: mercurial: Switch to pyproject.
add 630a74eda2 gnu: hg-commitsigs: Switch to pyproject.
add 84004ebc63 gnu: python-pypairix: Fix package.
add 9fc5c7fc5a gnu: python-pytorch: Switch to pyproject.
add acad78d869 gnu: python-pyspoa: Switch to pyproject.
add 60522ee6b9 gnu: python-pyxel: Switch to pyproject.
add ef593ec6c7 gnu: python-brian2tools: Switch to pyproject.
add b7d6faec88 gnu: Remove sqlcrush.
add 20b1ec49c2 gnu: Remove python-sqlalchemy-stubs.
add fc8cc883e9 gnu: python-flask-cors: Update to 6.0.2.
add 76e0ada220 gnu: python-forbiddenfruit: Fix build.
add fe034a0d19 gnu: python-lief: Update to 0.17.2.
add e71bd750d0 gnu: Remove python-islenska.
add 39063dc130 gnu: Remove xxkb.
add f9af3e7431 gnu: Remove emacs-nyxt.
add 5045a7e993 gnu: Remove nyxt.
add cd9e8d4292 gnu: Fix reproducibility for some TeX Live packages.
add 98bf786453 gnu: texlive build system: Install info files and man pages.
add 69761439cd gnu: beanquery: Ignore failing tests.
add e92198fc96 gnu: beancount-3: Update to 3.2.0.
add cb9f832a76 gnu: emacs-beancount: Update to 0.9.0-0.8a564f5.
add 04f5ce4c89 gnu: python-pytaglib: Update dependency on taglib.
add 7432e49351 gnu: Remove taglib-next.
add 4a9b509f7b gnu: kwallet: Correct input for Qt6.
add ae01b7278f gnu: kmailcommon: Correct input for Qt6.
add 1df4dddf96 gnu: kget: Add qpgme input.
add eb0711c636 gnu: qgpgme: Rename to qgpgme-qt5.
add 1c3068ae64 gnu: qgpgme-qt6: Rename to qgpgme.
add d71a19b522 gnu: Add emacs-vulpea.
add 82b43ffc3d gnu: qpwgraph: Update to 0.9.8.
add 619765830d etc: Add csantosb to reproduciblebuilds team.
add ecc094a1be gnu: python-pyzmq: Do not run flaky tests.
add ceb5521900 gnu: Add projectm-eval.
add d18019e344 gnu: Add projectm.
add 558ac6010e gnu: Add projectm-presets.
add 3084b68d2f gnu: imgui: Keep binary_to_compressed_c.cpp.
add 5726058585 gnu: Add projectm-sdl.
add 90a5bf85df gnu: Remove dataparksearch.
add 04288d2f0e gnu: mailcap: Update to 2.1.54.
add e6c7b9cb07 gnu: mailcap: Modernize package style.
add 0f038798e6 gnu: gnupg: Update to 2.4.8.
add b6ae415980 gnu: libssh2: Update to 1.11.1.
add 6afeaed560 gnu: libressl: Update to 4.2.1.
add 1e74ee9bf7 gnu: libfido2: Update to 1.16.0.
add c037d746ec gnu: nettle: Modernize.
add 9999f57386 gnu: nettle: Update to 3.10.2.
add 6cbd69709c gnu: python-gnupg: Update to 0.5.6.
add 2e58aba425 gnu: pcsc-lite: Update to 2.4.0
add f75cd26f6b gnu: ccid: Switch to meson-build-system
add feb258fda2 gnu: m8c: Update to 2.2.3.
add ecc22040d9 gnu: Add m8c-serial.
add 3dacaff686 gnu: manifold: Update to 3.3.2.
add e70ae7962b gnu: pagmo: Update dependency on tbb.
add daaa52775b gnu: r-quanteda: Update dependency on tbb.
add a49383dc8a gnu: r-terra: Update dependency on tbb.
add b9c65530c2 gnu: mu: Update to 1.12.15.
add c923aefff1 gnu: dyninst: Update dependency on tbb.
add e869717b0b gnu: mold: Update dependency on tbb.
add 131471e772 gnu: openscad: Update dependency on tbb.
add f2f1e95223 gnu: python-blacksheep: Update to 2.4.6.
add 4118335720 gnu: python-liberty-parser: Update to 0.0.29.
add 506150ac91 gnu: verilator: Update to 5.044.
add 7dcc450c3e gnu: sby: Update to 0.61.
add 1809c03ce1 gnu: eqy: Update to 0.61.
add 4c141fa968 gnu: mcy: Update to 0.61.
add 3bc84071cc gnu: iverilog: Update to 20251012.
add 44e6b63730 gnu: emacs-consult: Update to 3.2.
add 5b5831430a gnu: emacs-substitute: Update to 0.5.0.
add 2fcc0d22f9 gnu: cpuinfo: Update to 0.0-7.c4b4f4b.
add 52e41df49e gnu: beancount: Remove and replace by beancount-3.
add 6f164d6557 gnu: mariadb: Fix max nproc in tests.
add 63a7fd556d gnu: vcmi: Update dependency on tbb.
add 60b904e403 gnu: python-openturns: Update dependency on tbb.
add 65531c08cc gnu: easyeffects: Update dependency on tbb.
add 52444c364a gnu: libgit2: Set default version to 1.9.
add 928763879f gnu: Replace libgit2-1.9 with default libgit2 where
possible.
add f15629a425 gnu: Replace libgit2-1.8 with default libgit2 where possible
add ca5e06e6d3 gnu: sqlitebrowser: Update to 3.13.1.
add 1317dfcd4e gnu: sqlitebrowser: Use system nlohmann-json.
add 7082680b85 gnu: python-pygit2: Rename to python-pygit2-1.11.
add 7858619104 gnu: python-pygit2-1.18: Rename to python-pygit2.
add 64e0809a0b gnu: patman: Update input.
add 4c8d141e6f gnu: gallia: Update input.
add 19faa28d2d gnu: python-pypeit: Update input
add 86452ebdff gnu: offlate: Update input.
add a4db83ae33 gnu: openpmix: Fix home-page.
add f78c7cbf59 gnu: opencolorio: Update input.
add 87eabe2abf gnu: Add apache-parent-pom-33.
add 742bf6b194 gnu: Add apache-commons-parent-pom-78.
add 9c068c697c gnu: Add java-commons-io 2.21.
add 88db0fe9c9 gnu: Add java-mime4j-core.
add 26a71dc439 gnu: Add java-jakarta-activation-api.
add 35a6ef44ea gnu: Add java-axiom-base64-utils.
add 457c856234 gnu: Add java-axiom-xml-utils.
add 7d9e0b4778 gnu: Add java-axiom-core-streams.
add 045af1147d gnu: Add java-axiom-weaver-annotations.
add 21f43d0166 gnu: Add java-axiom-api.
add f8bb8c00bc gnu: Add java-axiom-core-mixins.
add d71fd2bce9 gnu: Add java-axiom-om-mixins.
add b1f6491e1a gnu: Add java-axiom-dom-mixins.
add 55689825a4 gnu: Add java-axiom-impl.
add 4a65c3561b gnu: Add java-saxon-he-10.
add 39c7591a9b doc: Fix an URL.
add 4d7a4a8f9c doc: Small rewording.
add 56cada2dab doc: Add an URL link.
add 0e8543e4e0 gnu: pocl: Apply style and modernize.
add ac7452d1a2 gnu: pocl: Update to 6.0.
add 692167b046 gnu: ocl-icd: Update to 2.3.4.
add f24fbb8711 gnu: clinfo: Update to 3.0.25.02.14.
add 65c729ac83 gnu: Remove python-cleanlab-1.
add 9f4eb225f3 gnu: Remove aegis.
add f3a5b26f75 gnu: Remove cook.
add 520cd9c146 gnu: Remove bison-3.0.
add 38e5de0e72 gnu: Remove python-monotonic.
add e9276d7313 gnu: Remove curseradio.
add 219ce24f1b gnu: krita: Update to 5.2.14.
add 88a43c2b63 gnu: python-ctranslate2: Update input.
add 88c1563121 gnu: Remove pybind11-2.10.
add 37adaed2cd gnu: emacs-ellama: Update to 1.10.11.
add cbd19b8038 gnu: emacs-consult: Update to 3.3.
add 2d885c7423 gnu: emacs-marginalia: Update to 2.8.
add bfefec5203 gnu: cuirass: Update to 1.3.4.
add 9994ccbf8a gnu: Rename ‘amdgpu-targets’ property and related bindings.
add feefe833ee gnu: rocm: Export ‘%default-amd-gpu-targets’ and
‘current-amd-gpu-targets’.
add 86984d7c62 gnu: clang-rocm: Add ‘compiler-amd-gpu-targets’ property.
add 4562bbb1d2 transformations: Add ‘--amd-gpu’ transformation option.
add 0793da3e05 gnu: grim: Update to 1.5.0.
add 3624595ddd gnu: grim: Improve style.
add 7e2af9070f gnu: grim: Fix URL.
add 61517fefef gnu: swayidle: Update to 1.9.0.
add e911e8c34d gnu: swayidle: Modernize package style.
add 88e0b45d68 gnu: wl-mirror: Update to 0.18.3.
add 50f63b74c4 gnu: wl-mirror: Improve style.
add 06b64cb7e4 licenses: Add Academic Free License v3.0.
add a36d0cffe5 gnu: prjpeppercorn: Update to 1.9.
add 86c783b5ed gnu: prjtrellis: Update to 1.4-1.92345b7.
add 0d09502184 gnu: nextpnr: Update to 0.9-1.d8117e3.
add 14e50c6393 gnu: php: Update to 8.5.2.
add a96d009153 gnu: librdkafka: Update to 1.6.1.
add fe6567255b gnu: Remove python-tmx.
add fae1deee45 gnu: libgrapheme: Update to 3.0.0.
add edec1d4f6a gnu: dwm: Update to 6.7.
add 0c81d4aee1 gnu: python-cleanlab: Update to 2.9.0.
add e89328d42d gnu: Add emacs-vui.
add dc19bad650 gnu: Add emacs-vulpea-ui.
add 19fc23fd89 gnu: modglue, cadabra: Add notes to avoid deletion.
add e335a06ccb gnu: packages/golang-xyz: Sort variables a->z.
add b1a0ba47a1 gnu: Add go-github-com-yaslama-go-wayland-wayland.
add 91b4b08b51 gnu: Add go-github-com-wifx-gonetworkmanager-v2.
add 91e9f8374a gnu: Add go-github-com-go-git-go-billy-v6.
add 5f04c79e0a gnu: Add go-github-com-go-git-gcfg-v2.
add e99c47b0f1 gnu: Add go-github-com-go-git-go-git-v6.
add a20e839424 gnu: Add dank-material-shell.
add feebfcd469 gnu: go-github-com-emersion-go-webdav: Update to 0.7.0.
add 6a1ce24c51 gnu: sogogi: Update to 0.0.0-1.e6fd81c.
add 3d409c98dc gnu: Add go-webdav.
add 47b3251168 gnu: miniflux: Update to 2.2.16.
add c02385b462 gnu: fntsample, guix: Fix cosmetic typos.
add fc542b2fb3 gnu: Add r-qvcalc.
add ed73b9d1cd gnu: Add r-nlstools.
add 31263e7283 gnu: r-testthat: Update to 3.3.1.
add da7566800d gnu: r-yaml: Update to 2.3.11.
add fddf1f0783 gnu: r-box: Update to 1.2.1.
add d711a56ad6 gnu: r-cards: Update to 0.7.1.
add e1a5e892ba gnu: r-ggbeeswarm: Update to 0.7.3.
add b2e6f2a503 gnu: r-ggthemes: Update to 5.2.0.
add 012b35f016 gnu: r-gplots: Update to 3.3.0.
add 854d4fc32b gnu: r-rpresto: Update to 1.4.8.
add 5670131bc7 gnu: r-runner: Update to 0.4.5.
add 442e21efe7 gnu: r-bestnormalize: Update to 1.9.2.
add a07e45d991 gnu: r-lme4: Update to 1.1-38.
add 8b20907adf gnu: r-ggpmisc: Update to 0.6.3.
add bc759212fd gnu: r-mirai: Update to 2.5.3.
add 950a63656c gnu: r-ggtangle: Update to 0.0.9.
add 4736d3a221 gnu: r-bindr: Update to 0.1.3.
add 5994130a6f gnu: r-globaloptions: Update to 0.1.3.
add 177f5f2c1a gnu: r-getoptlong: Update to 1.1.0.
add 3b72b719c9 gnu: r-piton: Update to 1.0.1.
add fbe18f85c1 gnu: r-doby: Update to 4.7.1.
add 30cc554b69 gnu: r-performance: Update to 0.15.3.
add bca5e2339b gnu: r-yulab-utils: Update to 0.2.2.
add 358578ce5b gnu: r-text2vec: Update to 0.6.6.
add decea0ac35 gnu: r-xml2: Update to 1.5.1.
add 56e27aded0 gnu: r-xgboost: Update to 3.1.2.1.
add 54d59e8114 gnu: r-patrick: Update to 0.3.1.
add 9db8b9041f gnu: r-spatstat-linnet: Update to 3.4-0.
add e4cf63153e gnu: r-spatstat: Update to 3.5-0.
add 1eb1f8da82 gnu: r-tidypredict: Update to 1.0.0.
add 092394a94e gnu: r-parsnip: Update to 1.4.0.
add 58c574185d gnu: r-vroom: Update to 1.6.7.
add f5fc5b271a gnu: r-exactextractr: Update to 0.10.1.
add ee4bd4fbd6 gnu: r-rsqlite: Update to 2.4.5.
add 241f26efd1 gnu: r-rlrsim: Update to 3.1-9.
add dac559eab3 gnu: r-parallelly: Update to 1.46.1.
add 8d68114788 gnu: r-reformulas: Update to 0.4.3.1.
add fad8a7860f gnu: r-isoband: Update to 0.3.0.
add f654d1c3a1 gnu: r-vim: Update to 7.0.0.
add d1dec8f94d gnu: r-timeseries: Update to 4052.112.
add 1be86a0277 gnu: r-xfun: Update to 0.55.
add 1763dde3a0 gnu: r-latex2exp: Update to 0.9.8.
add d9728f5c2d gnu: r-roi: Update to 1.0-2.
add 43c3b1ec93 gnu: r-catdata: Update to 1.2.5.
add d65f4ac260 gnu: r-extradistr: Update to 1.10.0.1.
add fcd5267f0b gnu: r-dbscan: Update to 1.2.4.
add be97ae5276 gnu: r-e1071: Update to 1.7-17.
add 14b23d1e5b gnu: r-purrr: Update to 1.2.1.
add eca3503863 gnu: r-httr2: Update to 1.2.2.
add e397d80636 gnu: r-htmltools: Update to 0.5.9.
add 2674fa1be8 gnu: r-geos: Update to 0.2.5.
add 366298a3ad gnu: r-feather: Update to 0.4.0.
add 95016077ff gnu: r-rcpp: Update to 1.1.1.
add 5f8b46cca5 gnu: r-ctrdata: Update to 1.25.1.
add 5a829a2d28 gnu: r-litedown: Update to 0.9.
add 61276fbd96 gnu: r-loo: Update to 2.9.0.
add 8be940d8ee gnu: r-redland: Update to 1.0.17-19.
add 1eca31fa73 gnu: r-later: Update to 1.4.5.
add 64d282906e gnu: r-wk: Update to 0.9.5.
add 197ecf5974 gnu: r-yaml: Update to 2.3.12.
add 3f1edf7b2e gnu: r-aster: Update to 1.3-7.
add ac20251f5b gnu: r-yulab-utils: Update to 0.2.3.
add db67882075 gnu: r-futile-logger: Update to 1.4.9.
add 58057f5b12 gnu: r-paletteer: Update to 1.7.0.
add 530227b170 gnu: r-microbiomestat: Update to 1.3.
add e35746fcad gnu: r-maxlik: Update to 1.5-2.2.
add 355d0f087c gnu: r-vcr: Update to 2.1.0.
add 104823a8c3 gnu: r-glmmtmb: Disable one test.
add a52bd3dc52 gnu: r-rmapshaper: Add update note.
add 8adc00030d gnu: r-shinystan: Update to 2.7.0.
add f5d5053df7 gnu: r-duckdb: Update to 1.4.3.
add 125a6bff67 gnu: r-testthat: Update to 3.3.2.
add f5934f83d9 gnu: r-bh: Update to 1.90.0-1.
add 0bf9680093 gnu: r-cpp11bigwig: Update to 0.1.3.
add 1be75412e8 gnu: r-valr: Update to 0.9.1.
add 602cbc2939 gnu: r-mutoss: Update to 0.1-14.
add a54351b9be gnu: r-metap: Update to 1.13.
add aef879af48 gnu: r-abn: Update to 3.1.13.
add 798abfcc28 gnu: r-cardx: Update to 0.3.1.
add 88522017eb gnu: r-collapse: Update to 2.1.6.
add d1049ab66a gnu: r-data-table: Update to 1.18.0.
add 6737480dfc gnu: r-earth: Update to 5.3.5.
add 627c4582ad gnu: r-ggfittext: Update to 0.10.3.
add 70efdc1f8a gnu: r-ggstats: Update to 0.12.0.
add f94f0f9edc gnu: r-ggstatsplot: Update to 0.13.4.
add 76fdf06c4d gnu: r-robslopes: Update to 1.1.4.
add a710c0391b gnu: r-climaemet: Update to 1.5.0.
add 695ae6ec48 gnu: r-climatol: Update to 4.4-0.
add 1b566d6a32 gnu: r-zoo: Update to 1.8-15.
add d74d29594b gnu: r-ggvenndiagram: Update to 1.5.7.
add 7265477e1a gnu: r-oompabase: Update to 3.2.11.
add 19f30114ef gnu: r-plotfunctions: Update to 1.5.
add 0b6cfe1760 gnu: r-plotmo: Update to 3.7.0.
add f0948bf836 gnu: r-plumber: Update to 1.3.2.
add 00f9cddc6a gnu: r-ga: Update to 3.2.5.
add 41efbfeda6 gnu: r-mclogit: Update to 0.9.15.
add 74ef3e4c2c gnu: r-astsa: Update to 2.4.
add f4cb5832a7 gnu: r-secretbase: Update to 1.1.0.
add 2fdd557fd3 gnu: r-selectr: Update to 0.5-1.
add 2c0688d827 gnu: r-hmisc: Update to 5.2-5.
add 95107919b7 gnu: r-fastglm: Update to 0.0.4.
add 22e211e740 gnu: r-mbess: Update to 4.9.42.
add 2de22ac1d3 gnu: r-ggtangle: Update to 0.1.0.
add b04cb57a00 gnu: r-rcppcctz: Update to 0.2.14.
add 73778565f0 gnu: r-rcppspdlog: Update to 0.0.24.
add 25ec5de0be gnu: r-audio: Update to 0.1-12.
add 8d1b06bbd2 gnu: r-circlize: Update to 0.4.17.
add c457c5fce1 gnu: r-proxy: Update to 0.4-29.
add 461bc59d7a gnu: r-lamw: Update to 2.2.6.
add ae2b633f03 gnu: r-rmumps: Update to 5.2.1-36.
add f7704568e4 gnu: r-knitr: Update to 1.51.
add a00cc47bc1 gnu: r-knitrbootstrap: Update to 1.0.4.
add a7b953871a gnu: r-broom: Update to 1.0.11.
add f3f0cd2248 gnu: r-statsexpressions: Update to 1.7.2.
add cca142a6bd gnu: r-ordinal: Update to 2025.12-29.
add cddc582c1a gnu: r-mice: Update to 3.19.0.
add fef3a48c37 gnu: r-trycatchlog: Update to 1.3.3.
add 5def34c9a3 gnu: r-venndiagram: Update to 1.8.2.
add 5336c36efe gnu: r-nanoparquet: Update to 0.4.3.
add 5563c1d882 gnu: r-statnet-common: Update to 4.13.0.
add 0496e0060c gnu: r-tseries: Update to 0.10-59.
add eb955fd808 gnu: r-fbasics: Update to 4052.98.
add 18e411b54f gnu: r-simdesign: Update to 2.22.
add 1b473ca82e gnu: r-arules: Update to 1.7.13.
add b7e9477c07 gnu: r-fsa: Update to 0.10.1.
add 72fcec3544 gnu: r-ggseqlogo: Update to 0.2.2.
add 7b6b4f1f74 gnu: r-ggsci: Update to 4.2.0.
add cb17630260 gnu: r-itsadug: Update to 2.5.
add 38e473ab5c gnu: r-pupillometryr: Update to 0.0.7.
add 244b0df3cd gnu: r-officer: Update to 0.7.2.
add 9e13eb8a2e gnu: r-insight: Update to 1.4.4.
add f41eb70f56 gnu: r-nodbi: Update to 0.14.0.
add 9258c23be7 gnu: r-abcrf: Update to 2.0.
add 2a5a73d998 gnu: r-gam: Update to 1.22-7.
add b52738fa94 gnu: r-superlearner: Update to 2.0-40.
add 4cae289df4 gnu: r-dofuture: Update to 1.1.3.
add 335ce72145 gnu: r-svdialogs: Update to 1.1.2.
add ef54df7157 gnu: r-emmeans: Update to 2.0.1.
add 272f37c8e9 gnu: r-bayesplot: Update to 1.15.0.
add 0278fb3b9b gnu: r-tmb: Update to 1.9.19.
add 2f4a260e03 gnu: r-ggeffects: Update to 2.3.2.
add 4933d343a0 gnu: r-gert: Update to 2.3.1.
add 90d0c7b03d gnu: r-mvabund: Update to 4.2.8.
add 120e9f185d gnu: r-afex: Update to 1.5-1.
add 22f4026e59 gnu: r-fmesher: Update to 0.6.1.
add d6acf504d7 gnu: r-tm: Update to 0.7-17.
add 2aeac4d912 gnu: r-tidytree: Update to 0.4.7.
add a1d55af8a3 gnu: r-sparsevctrs: Update to 0.3.5.
add ae35e4af6c gnu: r-rncl: Update to 0.8.8.
add ac66d7b1c2 gnu: r-gmisc: Update to 3.1.0.
add 406c22d9e3 gnu: r-spam: Update to 2.11-3.
add a95fd20fe3 gnu: r-future-apply: Update to 1.20.1.
add 5e1a72bac0 gnu: r-shinybs: Update to 0.63.0.
add 8fe3b74114 gnu: r-testit: Update to 0.15.
add 60698c7510 gnu: r-msir: Update to 1.4.
add 24198e49c4 gnu: r-lavaan: Update to 0.6-21.
add a16e39f22f gnu: r-pegas: Update to 1.4.
add dddae29502 gnu: r-bqtl: Update to 1.0-39.
add d17eabb557 gnu: r-bookdown: Update to 0.46.
add 8ab066555a gnu: r-gggenes: Update to 0.6.0.
add f51dd5f10b gnu: r-arrow: Update to 22.0.0.1.
add 1f2bb7a903 gnu: r-sctransform: Update to 0.4.3.
add 9eefdce9f4 gnu: r-blme: Update to 1.0-7.
add 75adfa609f gnu: r-leidenbase: Update to 0.1.36.
add 665f3fcfa0 gnu: r-terra: Update to 1.8-93.
add 745b1bb81e gnu: r-lifecycle: Update to 1.0.5.
add 1964a4b0a9 gnu: r-r-devices: Update to 2.17.3.
add ef531913fd gnu: r-hdrcde: Update to 3.5.0.
add c8b88a107e gnu: r-imager: Update to 1.0.8.
add 65ba723e91 gnu: r-anthropometry: Update to 1.21.
add a948d89077 gnu: r-knn-covertree: Update to 1.1.
add f71d724bf8 gnu: r-forecast: Update to 9.0.0.
add 22fd2584ae gnu: r-polycor: Update to 0.8-2.
add a14e7f12f3 gnu: r-butcher: Update to 0.4.0.
add f7a09a2fff gnu: r-rsconnect: Update to 1.7.0.
add 1c308cc7a8 gnu: r-rstantools: Update to 2.6.0.
add a4da265934 gnu: r-kendall: Update to 2.2.2.
add f4ef3dd41e gnu: r-projpred: Update to 2.10.0.
add 89bdb18c3c gnu: r-shapforxgboost: Update to 0.2.0.
add 7acde0c2d8 gnu: r-spatstat-utils: Update to 3.2-1.
add 92a732d144 gnu: r-clusterr: Update to 1.3.6.
add 0f2d2e59f9 gnu: r-nanoarrow: Update to 0.7.0-2.
add c9a13cd975 gnu: r-tidypredict: Update to 1.0.1.
add d133c180c1 gnu: r-parsnip: Update to 1.4.1.
add 042c8610ef gnu: r-infer: Update to 1.1.0.
add cb5f38fdbe gnu: r-lsa: Update to 0.73.4.
add b250c7dc97 gnu: r-qtl: Update to 1.74.
add a4ea41970a gnu: r-seuratobject: Update to 5.3.0.
add 7313f6c9aa gnu: r-seurat: Update to 5.4.0.
add b50717b15f gnu: r-mlr3: Update to 1.3.0.
add c4f8616c0a gnu: r-mlr3learners: Update to 0.14.0.
add 0c0e2f0f30 gnu: r-mlr3tuning: Update to 1.5.1.
add ae530205e1 gnu: r-highlight: Update to 0.5.2.
add 3f51967e54 gnu: r-stars: Update to 0.7-0.
add f03c53e192 gnu: r-delaporte: Update to 8.4.3.
add 6a936ef741 gnu: r-vgam: Update to 1.1-14.
add d8de8c03a4 gnu: r-tesseract: Update to 5.2.4.
add e146dffe2f gnu: r-rlang: Update to 1.1.7.
add bc57331318 gnu: r-tibble: Update to 3.3.1.
add ec9e0e163f gnu: r-rcpparmadillo: Update to 15.2.3-1.
add 764aeda400 gnu: r-tidyr: Update to 1.3.2.
add e51bce74c8 gnu: Add r-tidydr.
add 8530c0098b gnu: r-screpertoire: Update to 2.6.2.
add c4f407005a gnu: r-txdbmaker: Update to 1.6.2.
add dfdefad022 gnu: r-reactome-db: Update to 1.95.0.
add 5b63b6ceb6 gnu: r-systempiperdata: Update to 2.14.2.
add 62cf89ebb1 gnu: r-anvil: Update to 1.22.3.
add 0dedefe6a5 gnu: r-atena: Update to 1.16.1.
add e91c2436bb gnu: r-escape: Update to 2.6.2.
add f51536ec8a gnu: r-immapex: Update to 1.4.3.
add 6187a4b15c gnu: r-edger: Update to 4.8.2.
add de55053147 gnu: r-enhancedvolcano: Update to 1.28.2.
add aa70aec7ba gnu: r-genomeinfodb: Update to 1.46.2.
add 1983d614d8 gnu: r-genomicranges: Update to 1.62.1.
add 51366470dd gnu: r-gsva: Update to 2.4.4.
add 419fa16cb1 gnu: r-rcy3: Update to 2.30.1.
add c5fb1699ae gnu: r-rhdf5: Update to 2.54.1.
add 3183caa48a gnu: r-rtracklayer: Update to 1.70.1.
add 967fa3bebd gnu: r-sesame: Update to 1.28.1.
add 26046db011 gnu: r-tcgautils: Update to 1.30.2.
add 3de9a5ca19 gnu: r-transcriptr: Update to 1.38.3.
add 70482b6826 gnu: r-spectra: Update to 1.20.1.
add 849d9c683e gnu: r-systempiper: Update to 2.16.3.
add 5763557995 gnu: r-tximport: Update to 1.38.2.
add ec6eacbaff gnu: r-zellkonverter: Update to 1.20.1.
add b718d73c68 gnu: r-graph: Update to 1.88.1.
add 2536e5fc3e gnu: r-ggtree: Update to 4.0.4.
add 4c336c1f64 gnu: r-fgsea: Update to 1.36.2.
add 63d4849290 gnu: r-enrichplot: Update to 1.30.4.
add 151565ad4f gnu: r-clusterprofiler: Update to 4.18.4.
add 33617f7077 gnu: r-yapsa: Update to 1.36.1.
add 09a13d7978 gnu: r-wppi: Update to 1.18.0.
add 2b7cfa4c22 gnu: r-flowcore: Update to 2.22.1.
add faf7c1019c gnu: r-ggcyto: Update to 1.38.1.
add 86b2cbaaec gnu: r-flowworkspace: Update to 4.22.1.
add 8a1fc11cdc gnu: r-variancepartition: Update to 1.40.1.
add bd6b3e6df6 gnu: r-ucsc-utils: Update to 1.6.1.
add 834075237e gnu: r-bioccheck: Update to 1.46.3.
add 5f01d1c422 gnu: r-s4arrays: Update to 1.10.1.
add 99b2a8c5f9 gnu: r-h5mread: Update to 1.2.1.
add c9f948ce50 gnu: r-sparsearray: Update to 1.10.8.
add 5d00090f05 gnu: r-mscoreutils: Update to 1.22.1.
add 300f9ac160 gnu: r-bayesspace: Update to 1.20.2.
add 54da52a62c gnu: r-tximeta: Update to 1.28.1.
add 4aedbfc3f7 gnu: r-msnid: Disable one test.
add 4717268f99 gnu: r-signac: Update to 1.16.0-1.f5a8411.
add 620d422301 gnu: Add r-rarr.
add 36d0937fa3 gnu: r-zarrdataframe: Update to 0.0.0-2.84c7db2.
add 78b6d472be gnu: r-qs: Skip another test.
add 226da2ca10 gnu: r-pizzarr: Update to 0.1.0-2.5f47057.
add 7632847c2c gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.
add 0cc3eb6cac gnu: r-rnifti: Update to 1.9.0.
add cf68d3ff53 gnu: r-rcppannoy: Update to 0.0.23.
add ef900b0054 gnu: r-manipulatewidget: Update to 0.11.2.
add da37f3056d gnu: r-vctrs: Update to 0.7.0.
add 6d28170c77 gnu: r-stringdist: Update to 0.9.17.
add 0aff377885 gnu: r-extradistr: Update to 1.10.0.2.
add adee931e79 gnu: r-stringfish: Update to 0.18.0.
add 21834ea62e gnu: r-netgsa: Update to 4.0.7.
add 7a4421574b gnu: r-blob: Update to 1.3.0.
add 28d340ced8 gnu: r-fpc: Update to 2.2-14.
add 2acd86b6b5 gnu: r-prabclus: Update to 2.3-5.
add e3b0d64ea8 gnu: r-benchmarkmedata: Update to 2.0.0.
add e8c46523e8 gnu: r-clock: Update to 0.7.4.
add 44ad6947a6 gnu: r-ggpp: Update to 0.6.0.
add c95cbb403b gnu: r-snowflakeauth: Update to 0.2.1.
add 5191159455 gnu: r-survival: Update to 3.8-6.
add ffe419c002 gnu: r-polylabelr: Update to 1.0.0.
add 1e2012490f gnu: r-grandr: Update to 0.2.7.
add 80b0ce607f gnu: r-tglkmeans: Update to 0.5.8.
add 314a88ed73 gnu: r-secretbase: Update to 1.1.1.
add a39feed820 gnu: r-ggtangle: Update to 0.1.1.
add e07720582e gnu: r-rcppspdlog: Update to 0.0.26.
add 0e1d9905e2 gnu: r-rcppthread: Update to 2.3.0.
add 688c8c49c5 gnu: r-ctrdata: Update to 1.26.0.
add e07debf9e1 gnu: r-fastmatch: Update to 1.1-8.
add 042399644b gnu: r-xfun: Update to 0.56.
add e9b055c590 gnu: r-rappdirs: Update to 0.3.4.
add 3f36265033 gnu: r-renv: Update to 1.1.6.
add b9afde0a1e gnu: r-factominer: Update to 2.13.
add 8fd48e930f gnu: r-officer: Update to 0.7.3.
add 5bcb6e1775 gnu: r-dofuture: Update to 1.2.0.
add 7913a58aa0 gnu: r-ggformula: Update to 1.0.1.
add 4fe2e1a7b5 gnu: r-glmmtmb: Update to 1.1.14.
add e917030865 gnu: r-lmertest: Update to 3.2-0.
add 5a694c247e gnu: r-isorix: Update to 0.9.4.
add fe5a2030e4 gnu: r-future: Update to 1.69.0.
add 8dc7ffc270 gnu: r-shinyjs: Update to 2.1.1.
add 1b1890e953 gnu: r-sf: Update to 1.0-24.
add c770549ed1 gnu: r-xml2: Update to 1.5.2.
add f26fae34b4 gnu: r-xgboost: Update to 3.1.3.1.
add 969b63a882 gnu: r-alabama: Update to 2025.1.0.
add 1b244bb92c gnu: r-actfrag: Update to 0.1.2.
add a4e01eede7 gnu: r-expint: Update to 0.2-0.
add adbd43b1f5 gnu: r-rcdd: Update to 1.6-1.
add 461515b09e gnu: r-distributional: Update to 0.6.0.
add fb0f8c9ba9 gnu: r-spatstat-univar: Update to 3.1-6.
add ed82dfc663 gnu: r-warp: Update to 0.2.3.
add b02ffb8130 gnu: r-lwgeom: Update to 0.2-15.
add ab19a4b9aa gnu: r-paws-common: Update to 0.8.8.
add 73d0aa7ae3 gnu: r-rstudioapi: Update to 0.18.0.
add 891f727e16 gnu: r-segmented: Update to 2.2-0.
add c972b15173 gnu: r-ranger: Update to 0.18.0.
add ba1536b46e gnu: r-flames: Update to 2.4.2.
add 4bb7387297 gnu: r-pcatools: Update to 2.22.1.
add fc54006bb3 gnu: Add font-sligoil.
add 49d47688c0 gnu: awesome: Add missing input.
add 2887ea2e1f gnu: python-internetarchive: Update to 5.7.1.
new fd3677b0c9 gnu: flatpak: Update to 1.16.3.
new ba2fbdd2f5 gnu: Add osslsigncode.
new e3f51e0a08 gnu: pcsc-lite: Update to 2.4.1
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (85bff3d583)
\
N -- N -- N refs/heads/crypto-team (e3f51e0a08)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
CODEOWNERS | 4 +
Makefile.am | 1 +
doc/guix-cookbook.texi | 12 +-
doc/guix.texi | 99 +-
etc/guix-install.sh | 4 +-
etc/teams.scm | 14 +-
.../gnome-manifest.scm => mate/mate-manifest.scm} | 9 +-
etc/teams/rust/rust-crates.tmpl | 2 +-
gnu/bootloader/u-boot.scm | 15 +-
gnu/local.mk | 42 +-
gnu/packages/admin.scm | 2 +-
gnu/packages/audio.scm | 4 +-
gnu/packages/aux-files/linux-libre/6.17-riscv.conf | 2 +-
gnu/packages/bioconductor.scm | 282 +++--
gnu/packages/bioinformatics.scm | 49 +-
gnu/packages/bison.scm | 13 -
gnu/packages/c.scm | 81 +-
gnu/packages/check.scm | 46 +
gnu/packages/ci.scm | 4 +-
gnu/packages/cook.scm | 91 --
gnu/packages/cpp.scm | 132 +-
gnu/packages/cran.scm | 1280 +++++++++++---------
gnu/packages/crypto.scm | 50 +
gnu/packages/databases.scm | 32 +-
gnu/packages/dav.scm | 17 +
gnu/packages/duckdb.scm | 6 +-
gnu/packages/electronics.scm | 89 +-
gnu/packages/emacs-xyz.scm | 492 +++++---
gnu/packages/engineering.scm | 5 +
gnu/packages/finance.scm | 8 +-
gnu/packages/fonts.scm | 32 +-
gnu/packages/fontutils.scm | 2 +-
gnu/packages/game-development.scm | 66 +-
gnu/packages/games.scm | 181 +--
gnu/packages/golang-vcs.scm | 49 +
gnu/packages/golang-xyz.scm | 541 +++++----
gnu/packages/graphics.scm | 28 +-
gnu/packages/guile.scm | 23 +-
gnu/packages/hurd.scm | 2 +
gnu/packages/icu4c.scm | 51 +-
gnu/packages/image-processing.scm | 2 +-
gnu/packages/image.scm | 45 +-
gnu/packages/jami.scm | 2 +-
gnu/packages/java-xml.scm | 268 ++++
gnu/packages/java.scm | 82 ++
gnu/packages/javascript.scm | 10 +-
gnu/packages/jupyter.scm | 7 +-
gnu/packages/kde-graphics.scm | 4 +-
gnu/packages/kde-utils.scm | 2 +-
gnu/packages/lc0.scm | 9 +-
gnu/packages/librewolf.scm | 106 +-
gnu/packages/lisp-xyz.scm | 173 ++-
gnu/packages/llvm.scm | 89 +-
gnu/packages/machine-learning.scm | 86 +-
gnu/packages/maven-parent-pom.scm | 10 +
gnu/packages/monitoring.scm | 31 +-
gnu/packages/mpd.scm | 32 +-
gnu/packages/music.scm | 35 -
gnu/packages/networking.scm | 4 +-
gnu/packages/nss.scm | 6 +-
gnu/packages/opencl.scm | 118 +-
gnu/packages/package-management.scm | 8 +-
gnu/packages/parallel.scm | 88 +-
gnu/packages/patches/aegis-constness-error.patch | 12 -
gnu/packages/patches/aegis-perl-tempdir1.patch | 14 -
gnu/packages/patches/aegis-perl-tempdir2.patch | 18 -
gnu/packages/patches/aegis-test-fixup-1.patch | 15 -
gnu/packages/patches/aegis-test-fixup-2.patch | 24 -
gnu/packages/patches/collada-dom-boost.patch | 70 ++
.../patches/collectd-5.11.0-python-3.11.patch | 30 +
.../emacs-all-the-icons-remove-duplicate-rs.patch | 21 -
...sion.patch => icu4c-78-double-conversion.patch} | 8 +-
...tch => icu4c-bug-1706949-wasi-workaround.patch} | 194 +--
...0071-ICU-22132-standardize-vtzone-output.patch} | 2 -
...-1856290-ICU-20548-dateinterval-timezone.patch} | 2 -
...cu4c-bug-1954138-dtitvfmt-adopt-calendar.patch} | 16 +-
.../icu4c-bug-1972781-chinese-based-calendar.patch | 25 +
...-ICU-23264-increase-measure-unit-capacity.patch | 27 +
...c-bug-2002735-ICU-23277-coptic-single-era.patch | 109 ++
gnu/packages/patches/icu4c-suppress-warnings.patch | 80 ++
.../iniparser-remove-fetchcontent-usage.patch | 57 +
gnu/packages/patches/nextpnr-gtest.patch | 30 -
.../qemu-disable-aarch64-migration-test.patch | 24 +
.../quickjs-ng-64-bits-precision-on-i686.patch | 211 ++++
.../quickjs-ng-fix-atomics.pause-on-32-bit.patch | 26 +
.../patches/unity-test-set-subdir-correctly.patch | 30 +
gnu/packages/php.scm | 4 +-
gnu/packages/prolog.scm | 27 +-
gnu/packages/python-xyz.scm | 28 +-
gnu/packages/rocm.scm | 31 +-
gnu/packages/ruby-xyz.scm | 2 +-
gnu/packages/rust-crates.scm | 74 +-
gnu/packages/samba.scm | 66 +-
gnu/packages/security-token.scm | 4 +-
gnu/packages/statistics.scm | 55 +-
gnu/packages/suckless.scm | 29 +-
gnu/packages/time.scm | 20 -
gnu/packages/version-control.scm | 101 +-
gnu/packages/virtualization.scm | 8 +
gnu/packages/web.scm | 30 +-
gnu/packages/wm.scm | 183 ++-
gnu/packages/xdisorg.scm | 9 +-
gnu/services/base.scm | 3 +-
gnu/system/images/visionfive2.scm | 13 +-
gnu/tests/audio.scm | 1 +
gnu/tests/install.scm | 4 +-
guix/import/crate.scm | 4 +-
guix/import/elpa.scm | 2 +-
guix/import/nuget.scm | 35 +-
guix/licenses.scm | 7 +-
guix/scripts/import/nuget.scm | 6 -
guix/transformations.scm | 105 +-
po/packages/POTFILES.in | 1 -
tests/import/crate.scm | 4 +-
tests/import/nuget.scm | 270 +++++
tests/transformations.scm | 41 +-
116 files changed, 4802 insertions(+), 2489 deletions(-)
copy etc/teams/{gnome/gnome-manifest.scm => mate/mate-manifest.scm} (79%)
delete mode 100644 gnu/packages/cook.scm
delete mode 100644 gnu/packages/patches/aegis-constness-error.patch
delete mode 100644 gnu/packages/patches/aegis-perl-tempdir1.patch
delete mode 100644 gnu/packages/patches/aegis-perl-tempdir2.patch
delete mode 100644 gnu/packages/patches/aegis-test-fixup-1.patch
delete mode 100644 gnu/packages/patches/aegis-test-fixup-2.patch
create mode 100644 gnu/packages/patches/collada-dom-boost.patch
create mode 100644 gnu/packages/patches/collectd-5.11.0-python-3.11.patch
delete mode 100644
gnu/packages/patches/emacs-all-the-icons-remove-duplicate-rs.patch
copy gnu/packages/patches/{icu4c-double-conversion.patch =>
icu4c-78-double-conversion.patch} (95%)
copy gnu/packages/patches/{icu4c-wasi-workaround.patch =>
icu4c-bug-1706949-wasi-workaround.patch} (83%)
copy gnu/packages/patches/{icu4c-22132-standardize-vtzone-output.patch =>
icu4c-bug-1790071-ICU-22132-standardize-vtzone-output.patch} (87%)
copy gnu/packages/patches/{icu4c-20548-dateinterval-timezone.patch =>
icu4c-bug-1856290-ICU-20548-dateinterval-timezone.patch} (97%)
copy gnu/packages/patches/{icu4c-dtitvfmt-adopt-calendar.patch =>
icu4c-bug-1954138-dtitvfmt-adopt-calendar.patch} (86%)
create mode 100644
gnu/packages/patches/icu4c-bug-1972781-chinese-based-calendar.patch
create mode 100644
gnu/packages/patches/icu4c-bug-2000225-ICU-23264-increase-measure-unit-capacity.patch
create mode 100644
gnu/packages/patches/icu4c-bug-2002735-ICU-23277-coptic-single-era.patch
create mode 100644 gnu/packages/patches/icu4c-suppress-warnings.patch
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gnu/packages/patches/iniparser-remove-fetchcontent-usage.patch
delete mode 100644 gnu/packages/patches/nextpnr-gtest.patch
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gnu/packages/patches/qemu-disable-aarch64-migration-test.patch
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gnu/packages/patches/quickjs-ng-64-bits-precision-on-i686.patch
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gnu/packages/patches/quickjs-ng-fix-atomics.pause-on-32-bit.patch
create mode 100644 gnu/packages/patches/unity-test-set-subdir-correctly.patch
create mode 100644 tests/import/nuget.scm
