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new 0d2eb45aca gnu: Remove python-multivelo.
0d2eb45aca is described below
commit 0d2eb45aca683642a839068c4e8dc276ac2eb569
Author: Simon Tournier <[email protected]>
AuthorDate: Wed Feb 4 18:58:30 2026 +0100
gnu: Remove python-multivelo.
* gnu/packages/bioinformatics.scm (python-multivelo): Delete variable.
Fixes: guix/guix#5364
Change-Id: I7636eb262c9a3fcebde3678bad18110301ce8889
Merges: #6131
---
gnu/packages/bioinformatics.scm | 46 -----------------------------------------
1 file changed, 46 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 85a46e52a4..4e670d1b73 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -17507,52 +17507,6 @@ t-SNE algorithm. The implementation is described here:
@url{http://lvdmaaten.github.io/publications/papers/JMLR_2014.pdf}.";)
(license license:bsd-3))))
-(define-public python-multivelo
- (package
- (name "python-multivelo")
- (version "0.1.2")
- (source (origin
- (method url-fetch)
- (uri (pypi-uri "multivelo" version))
- (sha256
- (base32
- "1b4qyngwagh5sc2ygyfqyirg63myzh1g1glk03a1ykxfii32cjlp"))))
- (build-system pyproject-build-system)
- (arguments
- (list
- #:tests? #f ;pypi source does not contain tests
- #:phases
- #~(modify-phases %standard-phases
- (add-before 'sanity-check 'set-env
- (lambda _
- ;; numba RuntimeError: cannot cache function 'rdist'
- (setenv "NUMBA_CACHE_DIR" "/tmp"))))))
- (native-inputs (list python-pypa-build))
- (propagated-inputs
- (list python-anndata
- python-h5py
- python-ipywidgets
- python-joblib
- python-loompy
- python-matplotlib
- python-numba
- python-numpy
- python-pandas
- python-scanpy
- python-scikit-learn
- python-scipy
- python-scvelo
- python-seaborn
- python-tqdm
- python-umap-learn))
- (home-page "https://github.com/welch-lab/MultiVelo";)
- (synopsis "Velocity inference from single-cell multi-omic data")
- (description "MultiVelo uses a probabilistic latent variable model to
-estimate the switch time and rate parameters of gene regulation, providing a
-quantitative summary of the temporal relationship between epigenomic and
-transcriptomic changes.")
- (license license:bsd-3)))
-
(define-public python-mygene
(package
(name "python-mygene")
