guix_mirror_bot pushed a commit to branch master
in repository guix.
commit 384b63aa08e83959549f6bb3e962be90aafa6d4e
Author: Danny Milosavljevic <[email protected]>
AuthorDate: Fri Feb 13 11:28:48 2026 +0000
gnu: python-pycifrw: Generate sources from noweb.
* gnu/packages/physics.scm
(python-pycifrw)[arguments]<#:phases>{generate-sources}:
New phase.
{check}: Replace.
[native-inputs]: Add latex2html, noweb.
Change-Id: Iaaa77f8c857345ba63a1d07a782d7bf8d086c1c2
---
gnu/packages/physics.scm | 25 +++++++++++++++++++------
1 file changed, 19 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/physics.scm b/gnu/packages/physics.scm
index 59ae96a619..78eafa780b 100644
--- a/gnu/packages/physics.scm
+++ b/gnu/packages/physics.scm
@@ -32,10 +32,12 @@
#:use-module (gnu packages build-tools)
#:use-module (gnu packages check)
#:use-module (gnu packages cmake)
+ #:use-module (gnu packages documentation)
#:use-module (gnu packages gcc)
#:use-module (gnu packages machine-learning)
#:use-module (gnu packages maths)
#:use-module (gnu packages ninja)
+ #:use-module (gnu packages noweb)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-build)
@@ -172,18 +174,29 @@ scattering simulations.")
(version "4.4.6")
(source
(origin
- (method url-fetch)
- (uri (pypi-uri "PyCifRW" version))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/jamesrhester/pycifrw.git";)
+ (commit version)))
(sha256
- (base32 "05ggj4l9cir02m593azhl03wfjimx3rvwbznpx01bdqawxsmkgq2"))))
+ (base32 "0xda4vgm6dz6fhhrfv8y6igsc5kznlnv0j3yrwkbcd3qqv16ic6r"))))
(build-system pyproject-build-system)
(arguments
- ;; Tests are not included in the PyPI tarball.
- (list #:tests? #f))
+ (list
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-before 'build 'generate-sources
+ (lambda _
+ (invoke "make" "-C" "src" "PYTHON=python3" "package")
+ (invoke "make" "-C" "src/drel" "PYTHON=python3" "package")))
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ (invoke "python3" "TestPyCIFRW.py")))))))
(propagated-inputs
(list python-numpy python-ply))
(native-inputs
- (list python-setuptools)) ; build-backend = setuptools.build_meta
+ (list latex2html noweb python-setuptools))
(home-page "https://github.com/jamesrhester/pycifrw";)
(synopsis "CIF file reader and writer")
(description
