guix_mirror_bot pushed a commit to branch pybind11-2
in repository guix.
commit f86ff1db98ebf80abcde89b698b705dc89bf7cea
Author: Gabriel Wicki <[email protected]>
AuthorDate: Thu Mar 5 13:41:12 2026 +0100
gnu: Pin old pybind11 version.
* gnu/packages/python-xyz.scm (pybind11): Move definition to (pybind11-2).
(python-awkward-cpp, python-contourpy, python-hnswlib, python-dm-tree,
python-matplotlib, python-pikepdf, python-optree, python-fusepy): Change
reference to pybind11-2.
* gnu/packages/astronomy.scm (aoflagger, python-galsim, python-pyclp),
gnu/packages/bioinformatics.scm (python-metacells, python-strawc,
python-coolbox, python-pyspoa, python-scvelo),
gnu/packages/chemistry.scm (avogadrolibs),
gnu/packages/computer-architecture.scm (gem5),
gnu/packages/duckdb.scm (python-duckdb),
gnu/packages/electronics.scm (nextpnr, prjtrellis),
gnu/packages/engineering.scm (python-orocos-kinematics-dynamics),
gnu/packages/geo.scm (ogs-serial),
gnu/packages/graphics.scm (openshadinglanguage, openimageio),
gnu/packages/image-processing.scm (opencolorio),
gnu/packages/machine-learning.scm (python-fasttext, python-ml-dtypes,
onnx,
onnx-optimizer, onnxruntime, dlib, tensorflow-lite, tensorpipe,
python-pytorch, python-torchvision, python-ctranslate2, python-hmmlearn,
python-dlib),
gnu/packages/maths.scm (python-accupy, python-ducc0),
gnu/packages/networking.scm (libcamera),
gnu/packages/opencl.scm (python-pyopencl),
gnu/packages/package-management.scm (python-libmambapy),
gnu/packages/physics.scm (python-brille, python-gofit),
gnu/packages/python-check.scm (python-xdoctest),
gnu/packages/python-science.scm (pyre, python-boost-histogram,
python-cvxpy,
python-iminuit, python-osqp, python-pyamg, python-qdldl,
python-scikit-build-core, python-scipy, python-vaex-core, python-pyfma),
gnu/packages/radio.scm (gnuradio, gr-osmosdr, gr-dsd, gr-iqbal,
gr-satellites, limesuite-ng),
gnu/packages/simulation.scm (fenics, python-dolfin-adjoint),
gnu/packages/statistics.scm (python-diptest, python-george),
gnu/packages/syndication.scm (syndication-domination): Change reference
to pybind11-2.
Change-Id: Ib6abc8580fc2b4c35172f251ff6ba7d80ced4b7b
Signed-off-by: Gabriel Wicki <[email protected]>
---
gnu/packages/astronomy.scm | 6 +++---
gnu/packages/bioinformatics.scm | 10 +++++-----
gnu/packages/chemistry.scm | 2 +-
gnu/packages/computer-architecture.scm | 2 +-
gnu/packages/duckdb.scm | 2 +-
gnu/packages/electronics.scm | 4 ++--
gnu/packages/engineering.scm | 2 +-
gnu/packages/geo.scm | 2 +-
gnu/packages/graphics.scm | 4 ++--
gnu/packages/image-processing.scm | 2 +-
gnu/packages/machine-learning.scm | 26 +++++++++++++-------------
gnu/packages/maths.scm | 4 ++--
gnu/packages/networking.scm | 2 +-
gnu/packages/opencl.scm | 2 +-
gnu/packages/package-management.scm | 2 +-
gnu/packages/physics.scm | 4 ++--
gnu/packages/python-check.scm | 2 +-
gnu/packages/python-science.scm | 22 +++++++++++-----------
gnu/packages/python-xyz.scm | 16 ++++++++--------
gnu/packages/radio.scm | 12 ++++++------
gnu/packages/simulation.scm | 4 ++--
gnu/packages/statistics.scm | 4 ++--
gnu/packages/syndication.scm | 2 +-
23 files changed, 69 insertions(+), 69 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index ad18ea1f4d..c8ccce936b 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -257,7 +257,7 @@ reused in several astronomical applications, such as
@code{wsclean},
boost
pkg-config
python
- pybind11))
+ pybind11-2))
(inputs
(list casacore
cfitsio
@@ -5112,7 +5112,7 @@ CFITSIO library. Among other things, it can
(list eigen
fftw))
(propagated-inputs
- (list pybind11 ;XXX: Double check if it needs be here.
+ (list pybind11-2 ;XXX: Double check if it needs be here.
python-astropy
python-lsstdesc-coord
python-numpy))
@@ -7557,7 +7557,7 @@ and the Generalized Lomb-Scargle periodogram
(build-system pyproject-build-system)
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-pandas
python-pytest
python-scipy
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a08d9846cd..88a4174b28 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3252,7 +3252,7 @@ and gene expression visualization.")
python-scipy
python-threadpoolctl
python-umap-learn))
- (native-inputs (list pybind11 python-pytest python-setuptools))
+ (native-inputs (list pybind11-2 python-pytest python-setuptools))
(home-page "https://github.com/tanaylab/metacells.git";)
(synopsis "Single-cell RNA Sequencing Analysis")
(description "The metacells package implements the improved metacell
@@ -23875,7 +23875,7 @@ instruments, or Pacific Biosciences RSII or Sequel
sequencers.")
(inputs
(list curl zlib))
(propagated-inputs
- (list pybind11))
+ (list pybind11-2))
(home-page "https://github.com/aidenlab/straw";)
(synopsis "Stream data from .hic files")
(description "Straw is library which allows rapid streaming of contact
@@ -24006,7 +24006,7 @@ e.g. from GenBank or Gff files, or Biopython
SeqRecords.")
;; dependencies.
(delete 'sanity-check))))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-pytest
python-pypairix
python-setuptools
@@ -24072,7 +24072,7 @@ browser.")
"-DCMAKE_CXX_FLAGS=\"-I ../vendor/cereal/include/\" -fPIC"
"..")
(invoke "make")))))))
- (propagated-inputs (list pybind11))
+ (propagated-inputs (list pybind11-2))
(native-inputs (list cmake-minimal python-setuptools))
(home-page "https://github.com/nanoporetech/pyspoa";)
(synopsis "Python bindings for the SIMD partial order alignment library")
@@ -24159,7 +24159,7 @@ aligner.")
python-scipy
python-umap-learn
;; [optional]
- pybind11
+ pybind11-2
python-hnswlib
python-igraph
python-louvain))
diff --git a/gnu/packages/chemistry.scm b/gnu/packages/chemistry.scm
index b487f9e1a4..e9e6a97f9a 100644
--- a/gnu/packages/chemistry.scm
+++ b/gnu/packages/chemistry.scm
@@ -100,7 +100,7 @@
mmtf-cpp
googletest
pkg-config
- pybind11))
+ pybind11-2))
(inputs
`(("glew" ,glew)
("libarchive" ,libarchive)
diff --git a/gnu/packages/computer-architecture.scm
b/gnu/packages/computer-architecture.scm
index d4f4a4e2b1..277a92e1d4 100644
--- a/gnu/packages/computer-architecture.scm
+++ b/gnu/packages/computer-architecture.scm
@@ -136,7 +136,7 @@
hdf5
libpng
protobuf
- pybind11
+ pybind11-2
python
python-ply
python-pydot
diff --git a/gnu/packages/duckdb.scm b/gnu/packages/duckdb.scm
index 5d65e27c4c..e965f302a9 100644
--- a/gnu/packages/duckdb.scm
+++ b/gnu/packages/duckdb.scm
@@ -129,7 +129,7 @@ single-file databases with support for secondary indexes.")
(propagated-inputs
(list python-adbc-driver-manager))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-fsspec
;; python-google-cloud-storage ;python-grpcio fails (see:
guix/guix#1436)
python-numpy
diff --git a/gnu/packages/electronics.scm b/gnu/packages/electronics.scm
index 775a3cf5b4..356348eadc 100644
--- a/gnu/packages/electronics.scm
+++ b/gnu/packages/electronics.scm
@@ -1740,7 +1740,7 @@ layout of a circuit corresponds to the desired netlists.")
(inputs
(list boost
eigen
- pybind11
+ pybind11-2
qtimgui))
(synopsis
"Place-and-Route tool for @acronym{FPGA, Field Programmable Gate
Array}")
@@ -2084,7 +2084,7 @@ architecture from Cologne Chip. It also provides data
needed to produce a
(lambda _
(chdir "libtrellis"))))))
(native-inputs (list python-minimal-wrapper))
- (inputs (list openocd boost-1.88 pybind11))
+ (inputs (list openocd boost-1.88 pybind11-2))
(synopsis "Placement and routing for ECP5 FPGAs")
(description
"Project Trellis is a Nextpnr backend compatible with ECP5 FPGAs.
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index e95d8c88cd..599eb0c248 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -5298,7 +5298,7 @@ forward kinematics solvers.")
(source
(origin
(inherit (package-source orocos-kinematics-dynamics))))
- (native-inputs (list python pybind11 python-psutil))
+ (native-inputs (list python pybind11-2 python-psutil))
(inputs (list orocos-kinematics-dynamics))
(arguments
(list
diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm
index cdd5a91e49..f03e847d2c 100644
--- a/gnu/packages/geo.scm
+++ b/gnu/packages/geo.scm
@@ -941,7 +941,7 @@ OpenGeoSys")
(native-inputs
(list git
ninja
- pybind11))
+ pybind11-2))
(inputs
(list boost
eigen
diff --git a/gnu/packages/graphics.scm b/gnu/packages/graphics.scm
index 47b1aadf36..452a0f2cfa 100644
--- a/gnu/packages/graphics.scm
+++ b/gnu/packages/graphics.scm
@@ -916,7 +916,7 @@ baking tools to produce normal maps.")
clang
flex
llvm
- pybind11
+ pybind11-2
python-wrapper))
(inputs
(list boost-1.83
@@ -1736,7 +1736,7 @@ with strong support for multi-part, multi-channel use
cases.")
openjpeg
;; openvdb ; OpenVDB needs OIIO to be built with C++17 or higher
pugixml
- pybind11
+ pybind11-2
python-wrapper
robin-map
zlib))
diff --git a/gnu/packages/image-processing.scm
b/gnu/packages/image-processing.scm
index f9a307118f..86962a6978 100644
--- a/gnu/packages/image-processing.scm
+++ b/gnu/packages/image-processing.scm
@@ -324,7 +324,7 @@ licences similar to the Modified BSD licence."))))
(native-inputs
;; XXX: OCIO has unit tests for OpenShadingLanguage, but they fail.
;; They also require OIIO, but OCIO is an optional dependency to it.
- (list pybind11 python-wrapper))
+ (list pybind11-2 python-wrapper))
(inputs
(list expat
freeglut
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index 5fbdc453a1..3c5943961e 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -439,7 +439,7 @@ CTranslate2, which is a inference engine for transformer
models.")
(build-system pyproject-build-system)
(propagated-inputs (list python-numpy python-scipy))
(inputs (list fasttext))
- (native-inputs (list pybind11 python-setuptools python-wheel))))
+ (native-inputs (list pybind11-2 python-setuptools python-wheel))))
(define-public python-funsor
(package
@@ -805,7 +805,7 @@ Learning usecases.")
(find-files (site-packages inputs outputs) "\\.so$")))))))
(inputs (list eigen-for-python-ml-dtypes))
(propagated-inputs (list python-numpy))
- (native-inputs (list pybind11
+ (native-inputs (list pybind11-2
python-absl-py
python-pytest
python-setuptools))
@@ -2047,7 +2047,7 @@ parts of speech and entities, do syntactic analysis, and
more.")
(append
(list cmake-minimal
googletest
- pybind11
+ pybind11-2
python-fb-re2
python-parameterized
python-pytest
@@ -2135,7 +2135,7 @@ operators and standard data types.")
(package-transitive-supported-systems pkg)))
(list python-nbval))))
(inputs
- (list onnx protobuf pybind11))
+ (list onnx protobuf pybind11-2))
(propagated-inputs
(list python-numpy))
(synopsis "Library to optimize ONNX models")
@@ -2257,7 +2257,7 @@ with a single function call.")
nlohmann-json
onnx
protobuf
- pybind11
+ pybind11-2
re2-next
safeint
zlib))
@@ -2426,7 +2426,7 @@ than 8 bits, and at the end only some significant 8 bits
are kept.")
libwebp
libx11
openblas
- pybind11
+ pybind11-2
zlib))
(synopsis
"Toolkit for making machine learning and data analysis applications in
@@ -3791,7 +3791,7 @@ find_library(ML_DTYPES_LIBRARIES
(native-inputs
(list pkg-config
googletest
- pybind11
+ pybind11-2
python-setuptools
python-wrapper ;for its /bin
swig-4.0
@@ -4543,7 +4543,7 @@ multiplications and convolution library for server-side
inference.")
;; There are no tests
#:tests? #f))
(inputs (list libuv))
- (native-inputs (list googletest pkg-config pybind11 libnop))
+ (native-inputs (list googletest pkg-config pybind11-2 libnop))
(home-page "https://github.com/pytorch/tensorpipe";)
(synopsis "Tensor-aware point-to-point communication primitive for
machine learning")
@@ -5190,7 +5190,7 @@ PyTorch.")
openssl ; for cpp-httplib
pthreadpool
protobuf
- pybind11
+ pybind11-2
;; qnnpack
qnnpack-pytorch
rdma-core
@@ -5906,7 +5906,7 @@ implementations and an easy-to-use API to create custom
metrics. It offers:
python-pillow
python-pytorch))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-pytest
python-setuptools
python-wheel
@@ -6186,7 +6186,7 @@ models on CPU and GPU.")
(native-inputs (list ctranslate2
python-setuptools
python-wheel
- pybind11
+ pybind11-2
python-pyyaml
python-numpy))))
@@ -6324,7 +6324,7 @@ a Qt interface for Argos Translate.")
(propagated-inputs
(list python-numpy python-scikit-learn python-scipy))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-pytest
python-setuptools
python-setuptools-scm
@@ -7120,7 +7120,7 @@ add_subdirectory[(][.][.]/[.][.]/dlib/external/pybind11
pybind11_build[)]")
(list cmake-minimal
perl
pkg-config
- pybind11
+ pybind11-2
python-pytest
python-setuptools))))
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 0cb46da240..8316a2a550 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -4367,7 +4367,7 @@ primes and prime k-tuplets up to 264.")
"/include/eigen3/")
"\"],"))))))))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-matplotx
python-perfplot
python-pytest
@@ -4483,7 +4483,7 @@ programming language.")
(setenv "DUCC0_OPTIMIZATION" "portable-strip"))))))
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-nanobind
python-pytest
python-pytest-xdist
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index d2bf99b258..8ee6a31724 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -559,7 +559,7 @@ components.")
libtiff
libyaml
libyuv
- pybind11
+ pybind11-2
python-jinja2
python-ply
qtbase)
diff --git a/gnu/packages/opencl.scm b/gnu/packages/opencl.scm
index 39ce8cd29d..5ac1c6733b 100644
--- a/gnu/packages/opencl.scm
+++ b/gnu/packages/opencl.scm
@@ -355,7 +355,7 @@ A lexer, @code{pytools.lex}.
(native-inputs
(list cmake-minimal
pocl
- pybind11
+ pybind11-2
python-mako
python-nanobind
python-pytest
diff --git a/gnu/packages/package-management.scm
b/gnu/packages/package-management.scm
index 73f57738fe..8454f722c4 100644
--- a/gnu/packages/package-management.scm
+++ b/gnu/packages/package-management.scm
@@ -1839,7 +1839,7 @@ foundation for the Mamba package manager.")
(list cmake-minimal
ninja
pkg-config
- pybind11
+ pybind11-2
python-scikit-build
python-pytest
python-setuptools))
diff --git a/gnu/packages/physics.scm b/gnu/packages/physics.scm
index f6d63e1016..851977abbf 100644
--- a/gnu/packages/physics.scm
+++ b/gnu/packages/physics.scm
@@ -225,7 +225,7 @@ Version: ~a
(list catch2-3
cmake-minimal
highfive
- pybind11
+ pybind11-2
python-wrapper
python-setuptools
python-setuptools-scm))
@@ -275,7 +275,7 @@ scattering simulations.")
(for-each (lambda (test)
(invoke "python" test))
(find-files "tests" "^test_.*\\.py$"))))))))
- (native-inputs (list pybind11 python-setuptools cmake python-pytest
+ (native-inputs (list pybind11-2 python-setuptools cmake python-pytest
python-numpy))
(inputs (list eigen))
(home-page "https://github.com/ralna/gofit";)
diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm
index e92ed6b6cf..b544de336f 100644
--- a/gnu/packages/python-check.scm
+++ b/gnu/packages/python-check.scm
@@ -5151,7 +5151,7 @@ unused.")
(native-inputs
(list cmake-minimal
ninja
- pybind11
+ pybind11-2
python-pytest-bootstrap
python-scikit-build
python-setuptools))
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 1175752e07..b48896ef49 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -190,7 +190,7 @@
(number->string (parallel-job-count))
"1")
"-E" (string-join ignored-tests "|")))))))))
- (native-inputs (list openssh-sans-x python python-numpy pybind11 zip))
+ (native-inputs (list openssh-sans-x python python-numpy pybind11-2 zip))
(inputs (list gsl hdf5 openmpi postgresql))
(propagated-inputs (list python-pyyaml)) ;for the Python bindings
(home-page "http://pyre.orthologue.com/";)
@@ -574,7 +574,7 @@ higher scores.")
;; a way to use a system library.
(propagated-inputs (list python-numpy))
(native-inputs (list cmake-minimal
- pybind11
+ pybind11-2
python-pytest
python-pytest-benchmark
python-scikit-build-core
@@ -812,7 +812,7 @@ it can be used for displaying many qualitatively different
samples.")
;; verbose=True for more information.
"TestOpRelConeQuad::test_oprelcone_2")))))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-pytest
python-setuptools))
(propagated-inputs
@@ -1468,7 +1468,7 @@ Features:
(list #:test-flags #~(list "-k" "not test_interactive_pyside6")))
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-annotated-types
python-boost-histogram
python-ipykernel
@@ -2363,7 +2363,7 @@ web, by sharing data and other research outputs.")
(native-inputs
(list cmake-minimal
osqp
- pybind11
+ pybind11-2
python-pytest
python-pytorch
python-scikit-build-core
@@ -2501,7 +2501,7 @@ different units.")
(delete-file-recursively "pyamg"))))))
(build-system pyproject-build-system)
(native-inputs
- (list pybind11
+ (list pybind11-2
python-cppheaderparser
python-pytest
python-pyyaml
@@ -2690,7 +2690,7 @@ or as a TikZ file for use in LaTeX documents;
(build-system pyproject-build-system)
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-pytest
python-setuptools))
(propagated-inputs (list python-numpy python-scipy))
@@ -2929,7 +2929,7 @@ genetic variation data.")
python-pathspec
python-tomli
python-typing-extensions))
- (native-inputs (list pybind11
+ (native-inputs (list pybind11-2
python-cattrs
python-fastjsonschema
python-hatch-fancy-pypi-readme
@@ -3419,7 +3419,7 @@ cross-validation.")
(inputs
(list boost-1.88
openblas
- pybind11
+ pybind11-2
qhull
xsimd))
(propagated-inputs
@@ -4740,7 +4740,7 @@ readable.")
(("#include <nonstd/string_view.hpp>")
"#include <cstdint>\n#include <nonstd/string_view.hpp>")))))))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-cython
python-setuptools))
(inputs
@@ -5869,7 +5869,7 @@ science including tools for accessing data sets in
Python.")
"12i68jj9n1qj9phjnj6f0kmfhlsd3fqjlk9p6d4gs008azw5m8yn"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-numpy-1))
- (native-inputs (list pybind11 python-pytest python-setuptools))
+ (native-inputs (list pybind11-2 python-pytest python-setuptools))
(home-page "https://github.com/nschloe/pyfma";)
(synopsis "Fused multiply-add for Python")
(description "@code{pyfma} provides an implementation of fused
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 0ec525b8f9..59921e00f9 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -542,7 +542,7 @@ compare against a vast section of other version formats.")
;; tests: 22304 passed, 524 skipped
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-pytest
python-scikit-build-core))
(propagated-inputs
@@ -3374,7 +3374,7 @@ into dataclasses.")
;; Tests that pass but avoided for load reasons.
"-k" "not test_filled_random_big and not
test_lines_random_big")))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-meson
python-pytest
python-wurlitzer))
@@ -5483,7 +5483,7 @@ interface utility to parse @url{https://hjson.github.io/,
HJSON}) documents.")
((", '-march=native'")
"")))))))
(native-inputs
- (list pybind11
+ (list pybind11-2
python-pytest
python-setuptools))
(propagated-inputs
@@ -9242,7 +9242,7 @@ browser.")
(native-inputs
(list python-setuptools))
(inputs
- (list pybind11
+ (list pybind11-2
static-abseil-cpp
python))
(propagated-inputs
@@ -12075,7 +12075,7 @@ comparison.
(native-inputs
(list pkg-config
python-meson
- pybind11
+ pybind11-2
python-pytest
python-pytest-timeout
python-pytest-xdist
@@ -12812,7 +12812,7 @@ Python list with elements of type @code{PIL.Image}
(from the
(base32 "0hpnb63xp8yaflah3i1z5azh6mg36rz0liy27km47417w2q72v0c"))))
(build-system pyproject-build-system)
(native-inputs
- (list pybind11
+ (list pybind11-2
python-attrs
python-hypothesis
python-setuptools-scm
@@ -14588,7 +14588,7 @@ connect strings, then issue SQL commands within IPython
or IPython Notebook.")
python-setuptools
python-wheel
cmake-minimal
- pybind11))
+ pybind11-2))
(home-page "https://github.com/metaopt/optree";)
(synopsis "Optimized PyTree Utilities")
(description "This package contains operations on PyTrees (a tree made of
@@ -26645,7 +26645,7 @@ commit, but it also includes some other useful
statistics.")
binding is created using the standard @code{ctypes} library.")
(license license:isc)))
-(define-public pybind11
+(define-public pybind11-2
(package
(name "pybind11")
(version "2.13.6")
diff --git a/gnu/packages/radio.scm b/gnu/packages/radio.scm
index add3569629..d2b2026a97 100644
--- a/gnu/packages/radio.scm
+++ b/gnu/packages/radio.scm
@@ -1042,7 +1042,7 @@ used by RDS Spy, and audio files containing
@dfn{multiplex} signals (MPX).")
js-mathjax
orc
pkg-config
- pybind11
+ pybind11-2
python-cheetah
python-mako
python-pyzmq
@@ -1140,7 +1140,7 @@ environment.")
(add-after 'install 'wrap-python
(assoc-ref py:%standard-phases 'wrap)))))
(native-inputs
- (list doxygen pkg-config pybind11 python-mako python-six))
+ (list doxygen pkg-config pybind11-2 python-mako python-six))
(inputs
(list airspy
airspyhf
@@ -1226,7 +1226,7 @@ primitives for SDR (Software Defined Radio).")
(list cppunit
doxygen
pkg-config
- pybind11
+ pybind11-2
python-numpy))
(inputs
(list boost-1.83
@@ -1278,7 +1278,7 @@ DMR, NXDN, P25, etc.")
(native-inputs
(list doxygen
pkg-config
- pybind11
+ pybind11-2
python
python-numpy
python-six))
@@ -1332,7 +1332,7 @@ to the fix block above.
(add-after 'install 'wrap-python
(assoc-ref py:%standard-phases 'wrap)))))
(native-inputs
- (list pkg-config pybind11 python-six))
+ (list pkg-config pybind11-2 python-six))
(inputs
(list boost-1.83
gmp
@@ -2007,7 +2007,7 @@ operators.")
googletest
libusb
mesa
- pybind11
+ pybind11-2
python
python-numpy
soapysdr
diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm
index bcc4427559..14f1f0fc18 100644
--- a/gnu/packages/simulation.scm
+++ b/gnu/packages/simulation.scm
@@ -1220,7 +1220,7 @@ demos = [d for d in demos if d[0].stem not in
excludeList]~%"
(inputs
(modify-inputs (package-inputs fenics-dolfin)
(delete "python")
- (prepend pybind11 python-matplotlib)))
+ (prepend pybind11-2 python-matplotlib)))
(native-inputs
(modify-inputs (package-native-inputs fenics-dolfin)
(prepend cmake-minimal
@@ -1508,7 +1508,7 @@ counters and tunnels).")
;; has already been loaded.
(delete 'sanity-check))))
(inputs
- (list fenics openmpi pybind11))
+ (list fenics openmpi pybind11-2))
(native-inputs
(list pkg-config
python-decorator
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 4b3ce96f62..b3d749d8db 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -737,7 +737,7 @@ covariance @url{https://github.com/vnmabus/dcor#sr14,[SR14]}
(build-system pyproject-build-system)
(native-inputs
(list cmake-minimal ;TODO: propagate from python-scikit-build-core
- pybind11
+ pybind11-2
python-pytest
python-scikit-build-core))
(propagated-inputs
@@ -1108,7 +1108,7 @@ sampler for Markov chain Monte Carlo (MCMC).")
(build-system pyproject-build-system)
(native-inputs
(list cmake-minimal
- pybind11
+ pybind11-2
python-pytest
python-scikit-build-core
python-setuptools-scm))
diff --git a/gnu/packages/syndication.scm b/gnu/packages/syndication.scm
index 3c49c6780b..f3db338bb3 100644
--- a/gnu/packages/syndication.scm
+++ b/gnu/packages/syndication.scm
@@ -478,7 +478,7 @@ to create RSS feeds for websites that don't provide any.")
(sha256
(base32
"1fl362920n6nz4x9wihyzbr82d9cy60sknhmajj62whd5gs49sbw"))))
(build-system meson-build-system)
- (inputs (list fmt tidy-html pybind11 python pugixml))
+ (inputs (list fmt tidy-html pybind11-2 python pugixml))
(native-inputs (list cmake-minimal pkg-config)) ; need cmake to find
pybind11
(home-page "https://gitlab.com/gabmus/syndication-domination";)
(synopsis "RSS/Atom feed parser")
