guix_mirror_bot pushed a commit to branch r-team
in repository guix.
commit 8f3cee52e34abab331437ef5ee95255896a678af
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Wed Mar 4 13:25:30 2026 +0100
gnu: r-singlet: Update to 0.99.8-1.ef4a374.
Yes, this is an update, even though the patch level used to be .26 and now
is .8. That's post-semantic versioning.
* gnu/packages/bioinformatics.scm (r-singlet): Update to 0.99.8-1.ef4a374.
[propagated-inputs]: Add r-statmod.
Change-Id: I95d1d60966c68cb8f66d79b6af6cab82bcf16a62
---
gnu/packages/bioinformatics.scm | 10 ++++++----
1 file changed, 6 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6a9c65a734..74d6a92a76 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1694,11 +1694,11 @@ the mutation counts.")
(license license:gpl3)))
(define-public r-singlet
- (let ((commit "765a6c45081807a1522f0e8983e2417822a36f36")
+ (let ((commit "ef4a374f27681477b95d856b74bd3cbbb379308d")
(revision "1"))
(package
(name "r-singlet")
- (version (git-version "0.99.26" revision commit))
+ (version (git-version "0.99.8" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -1707,7 +1707,7 @@ the mutation counts.")
(file-name (git-file-name name version))
(sha256
(base32
- "040v8wzl9qr8ribr6qss61fz4698d14cqs8nxbc8hqwiqlpy3vs4"))))
+ "1s9g3i0ypsnpnal40f223d5lzijxchwaf1kvavyijl75zaj8i6af"))))
(properties `((upstream-name . "singlet")))
(build-system r-build-system)
(propagated-inputs (list r-dplyr
@@ -1718,10 +1718,12 @@ the mutation counts.")
r-matrix
r-msigdbr
r-rcpp
+ ;; See
https://github.com/zdebruine/singlet/issues/25
r-rcppml/devel
r-reshape2
r-scuttle
- r-seurat))
+ r-seurat
+ r-statmod))
(native-inputs (list r-knitr r-testthat))
(home-page "https://github.com/zdebruine/singlet";)
(synopsis "Non-negative Matrix Factorization for single-cell analysis")
