guix_mirror_bot pushed a commit to branch master
in repository guix.
commit 2c471ff363a05b1b77160c55a44c12b4994a9fd3
Author: Andreas Enge <[email protected]>
AuthorDate: Wed Jun 3 11:04:13 2026 +0200
gnu: Remove phylip.
* gnu/packages/bioinformatics.scm (phylip): Delete variable.
Change-Id: I82382ccf745124889814d64ca95c2e8f9a4f671b
Signed-off-by: Liliana Marie Prikler <[email protected]>
---
gnu/packages/bioinformatics.scm | 36 ------------------------------------
1 file changed, 36 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index fcad81e0d1..efebebc6fc 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -15863,42 +15863,6 @@ adapter trimming as well as quality control, with some
added functionality to
remove biased methylation positions for RRBS sequence files.")
(license license:gpl3+)))
-(define-public phylip
- (package
- (name "phylip")
- (version "3.697")
- (source
- (origin
- (method url-fetch)
- (uri (string-append "http://evolution.gs.washington.edu/phylip/";
- "download/phylip-" version ".tar.gz"))
- (sha256
- (base32
- "1h8h0nafnlbqryswxgplx80k2044yhfz97jh13vsgzlaifqdh9ls"))))
- (build-system gnu-build-system)
- (arguments
- `(#:tests? #f ; no check target
- #:make-flags (list "-f" "Makefile.unx" "CFLAGS=-fcommon" "install")
- #:parallel-build? #f ; not supported
- #:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'enter-dir
- (lambda _ (chdir "src")))
- (delete 'configure)
- (replace 'install
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((target (string-append (assoc-ref outputs "out")
- "/bin")))
- (mkdir-p target)
- (for-each (lambda (file)
- (install-file file target))
- (find-files "../exe" ".*"))))))))
- (home-page "https://evolution.genetics.washington.edu/phylip/";)
- (synopsis "Tools for inferring phylogenies")
- (description "PHYLIP (the PHYLogeny Inference Package) is a package of
-programs for inferring phylogenies (evolutionary trees).")
- (license license:bsd-2)))
-
(define-public phyml
(package
(name "phyml")
