rekado pushed a commit to branch master
in repository guix.
commit 4d06ef4b716f3023e6907c6abdc41c02d524a16b
Author: Ricardo Wurmus <[email protected]>
Date: Fri May 10 12:47:18 2019 +0200
gnu: Add r-rbowtie.
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ab9f3e9..c594621 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4369,3 +4369,26 @@ number states are realizations of Multinomial random
variables; counts are
modeled as Poisson random processes; and continuous measures are modeled by
Gaussian distributions.")
(license license:gpl2+)))
+
+(define-public r-rbowtie
+ (package
+ (name "r-rbowtie")
+ (version "1.24.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Rbowtie" version))
+ (sha256
+ (base32
+ "1p8gbd2zn677lq8d009p2cplg1jm2jhn81lppipj638i9ynjh44f"))))
+ (properties `((upstream-name . "Rbowtie")))
+ (build-system r-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "https://bioconductor.org/packages/Rbowtie/";)
+ (synopsis "R bowtie wrapper")
+ (description
+ "This package provides an R wrapper around the popular bowtie short read
+aligner and around SpliceMap, a de novo splice junction discovery and
+alignment tool.")
+ (license license:artistic2.0)))
