On 22/09/16 07:14, Marius Bakke wrote:
Thanks for the review. Updated patches attached.
I'm not sure whether this is a product of the upgrade or not, but I
notice this in the build log. I think it is harmless though, WDYT?
Subject: [PATCH 1/3] gnu: python-pysam: Update to 0.9.1.4.
starting phase `validate-runpath'
validating RUNPATH of 10 binaries in
warning: RUNPATH contains bogus entries: ("pysam" "."
Also, I notice that pysam bundles htslib, bcftools and samtools C code.
Hopefully it should be straightforward enough to remove htslib as there
are install instructions, I'm not sure about the other two. This
shouldn't block the patch here, but would you mind taking a look?
The other two patches LGTM.