Hi Romain,

You can use the P, C, and A (parasagittal, coronal, axial): Slice
Indices/Coordinates controls in the Workbench Toolbar to toggle or scroll
through volume slices in Volume view. Is that the kind of navigation you are
talking about?

 

Jenn

 

Jennifer Elam, Ph.D.
Outreach Coordinator, Human Connectome Project
Washington University School of Medicine
Department of Anatomy and Neurobiology, Box 8108
660 South Euclid Avenue
St. Louis, MO 63110
314-362-9387
[email protected]
www.humanconnectome.org

 

From: romain valabregue [mailto:[email protected]] 
Sent: Tuesday, June 25, 2013 8:28 AM
To: Jennifer Elam
Cc: [email protected]
Subject: Re: [HCP-Users] surface viewer

 


Hello

thanks this is indeed a nice viewer. well done!

In the volume view I coul not navigate within the slice with the mouse (like
in all 3 plan 3D view)
do I miss something ?


thanks again

Romain


24/06/2013 17:33, Jennifer Elam a écrit :

Hi Romain,

 

We recommend using Connectome Workbench, the visualization software being
created by and for the HCP. You can get the latest version (beta v0.82,
released June 14, 2013) at
http://humanconnectome.org/connectome/get-connectome-workbench.html   along
with a detailed tutorial and tutorial dataset based on HCP data from 20
unrelated subjects that were released in March 2013. Note: you will need to
login to ConnectomeDB and sign the data use terms in order to download
Workbench if you have not already done so. 

 

Workbench has an intuitive and easy to use interface for viewing HCP files
and your own data. Currently, you can view brain volumes, surfaces, labels,
foci, fMRI time series maps, task contrasts, and a demonstration group
average functional connectivity dataset. GIFTI, NIFTI, and the new CIFTI
format (see Glasser
<http://www.sciencedirect.com/science/article/pii/S1053811913005053> et al.
2013) are supported. 

 

The HCP is looking for users to give Connectome Workbench a try and give us
feedback on what they like and don't link about the platform and what new
features are needed. 

 

Hope you try it out and thanks, Romain, for giving us the opportunity to
advertise!     

 

Best,

Jennifer

 

Jennifer Elam, Ph.D.

Outreach Coordinator, Human Connectome Project

Washington University School of Medicine

Department of Anatomy and Neurobiology, Box 8108

660 South Euclid Avenue

St. Louis, MO 63110

314-362-9387

[email protected]

www.humanconnectome.org

 

 

-----Original Message-----
From: [email protected]
[mailto:[email protected]] On Behalf Of romain
valabregue
Sent: Monday, June 24, 2013 10:03 AM
To: [email protected]
Subject: [HCP-Users] surface viewer

 

Hello

 

the .gii surface and label files can not be open with freeview ...

Which wiewer would you then advice ?

 

 

Many thanks

 

Romain

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