Hi, I'm trying to use FSL FDT to do some probabilistic tractography. I have run bedpostx and am now trying to run registration within FDT. According to an error I'm getting from the FSL FDT gui, I'm meant to have a nodif_brain image in the bedpostx directory but this is not the case. I do have the nodif_brain_mask image however.
Am I missing something? Is this nodif_brain image meant to come with HCP datasets (e.g the new S500 release) or am I meant to create it myself? I can't see any mention of it in the S500 release reference manual. Or perhaps I shouldn't be using it at all? I figured I needed to use it in order to set the seed space to diffusion space. But if I'm wrong on this could someone tell me which file to use for the "seed to diff transform" and "diff to seed transform" in PROBTRACKX? Cheers, Linden _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
