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Have a look at the HCP diffusion pipeline:
In particular scripts/eddy_postproc.sh
Peace,
Matt.
From: 木村一皓 <[email protected]>
Date: Saturday, November 22, 2014 at 3:25 AM To: "[email protected]" <[email protected]> Subject: [HCP-Users] Questions about preprocesssing of dMRI data Dear all,
I'd like to take the same preprocessing steps as HCP also in my own data of dMRI.
Though I could do 'TOPUP' and 'EDDY' from FSL, I don't konw what I should do in Gardient nonlinearlity correction and calculation of gradient bvalue/bevctor deviation steps to make the file grad_dev.nii.gz.
Could somebody tell me what is the command to do this in FSL?
Best,
Ikko
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- [HCP-Users] Questions about preprocesssing of dMRI data 木村一皓
- Re: [HCP-Users] Questions about preprocesssing of dM... Glasser, Matthew
