Hi Jenn, you were spot on! I got the 455 subjects with completed dMRI
datasets now. Considering that I want to do tractography analysis, I
assume that this filter will give me the datasets needed (complete HCP
dMRI protocol), correct?
On a side note, how can I delete a "saved group" within the
ConnectomeDb? I can only see the "save group" option in it.
Thank you.
Estephan
On 3/31/15 11:45 AM, Jennifer Elam wrote:
Hi Estephan,
There are 455 subjects with "complete" dMRI data. You did the
filtering for dMRI complete = TRUE on the original S500 release group
(released in June 2014). Instead, do the DB filtering on "All Family
Subjects". See the screenshots below:
What you did that yielded 441 dMRI complete subjects:
Click on the “Show All Subjects” button to reset the filter to show
All currently released subjects (as of the S500 +MEG2 release in
November 2014).
Now, reset your filters and you will find 455 Subjects:
Also, note that the filter term Diffusion MRI Complete means that we
collected 6 dMRI scans for these subjects (the full HCP dMRI protocol,
see Reference Manual for details), with all directions collected.
Best,
Jenn
Jennifer Elam, Ph.D.
Outreach Coordinator, Human Connectome Project
Washington University School of Medicine
Department of Anatomy and Neurobiology, Box 8108
660 South Euclid Avenue
St. Louis, MO 63110
314-362-9387
[email protected]
www.humanconnectome.org
-----Original Message-----
From: [email protected]
[mailto:[email protected]] On Behalf Of Harms, Michael
Sent: Monday, March 30, 2015 10:00 PM
To: Estephan J. Moana-Filho; [email protected]
Subject: Re: [HCP-Users] Discrepancy of number of subjects with
complete dMRI datasets for download and those listed in the CSV file
Hi,
Can you try again? I tried just now, and I'm getting 455 subjects
listed when I filter on "dMRI_Compl" = TRUE.
thanks,
-MH
--
Michael Harms, Ph.D.
-----------------------------------------------------------
Conte Center for the Neuroscience of Mental Disorders Washington
University School of Medicine Department of Psychiatry, Box 8134
660 South Euclid Ave. Tel: 314-747-6173
St. Louis, MO 63110 Email: [email protected] <mailto:[email protected]>
On 3/30/15 5:45 PM, "Estephan J. Moana-Filho" <[email protected]
<mailto:[email protected]>> wrote:
Dear HCP admins,
I am interested in working with the dMRI data from the "500 Subjects +
MEG2" release. I filtered the available data with "Study
completion>Study completion: 3T MR>Diffusion MRI completed>TRUE", and
441 subjects were listed who completed dMRI. However, from the
unrestricted CSV file, 455 subjects are listed that had the value "TRUE"
for the "dMRI_Compl" variable.
I cross-checked the subjects IDs from each source, and noticed that all
14 subjects listed in the CSV file but that do not have dMRI data
available for download from ConnectomeDb have value of "MEG2" for the
"Release" variable. Can you confirm that 441 is the correct number of
subjects with complete dMRI data?
Thank you.
Estephan J. Moana-Filho, DDS, MS, PhD
Clinical Assistant Professor
TMD and Orofacial Pain Division
U of MN School of Dentistry
[email protected] <mailto:[email protected]>
_______________________________________________
HCP-Users mailing list
[email protected] <mailto:[email protected]>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
________________________________
The materials in this message are private and may contain Protected
Healthcare Information or other information of a sensitive nature. If
you are not the intended recipient, be advised that any unauthorized
use, disclosure, copying or the taking of any action in reliance on
the contents of this information is strictly prohibited. If you have
received this email in error, please immediately notify the sender via
telephone or return mail.
_______________________________________________
HCP-Users mailing list
[email protected] <mailto:[email protected]>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
_______________________________________________
HCP-Users mailing list
[email protected]
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
