hi HCP,
we are trying to do tractography using FSL and HCP data. i have some questions -- i suspect they have been answered already, but couldn't find those answers: 1. is there a file containing the grayordinate coordinates in the diffusion space for a particular subject, both subcortical voxels and cortical vertices? 2. if i want to use some cortical and subcortical voxels from the list of grayordinates as targets, do i have to run probtrackx2 twice (i.e. once for the cortical surface vertices and once for the subcortical voxels), or can i run it just once? 3. where is the label file for the grayordinate vertices/voxels for a given subject? thanks in advance. -dh _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
