It sounds like the FreeSurfer pipeline might not have finished okay. Does the ${StudyFolder}/${Subject}/T1w/${Subject}/mri/wmparc.mgz file exist?
Peace, Matt. On 6/25/15, 9:14 PM, "hcp-users-boun...@humanconnectome.org on behalf of Marta Moreno" <hcp-users-boun...@humanconnectome.org on behalf of mmorenoort...@icloud.com> wrote: >Hi users, > >I run PostfreesurferPipeline script and I am getting the next error: ³can >not open T1w/wmparc_1mm for reading². I checked and the file is not >there. >I am running Freesurfer v5.3.0, not the HCP version. Any help, please? > >Thanks, > >Leah >_______________________________________________ >HCP-Users mailing list >HCP-Users@humanconnectome.org >http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users