Re: [HCP-Users] automating figure creation with wb_command

[Glasser, Matthew]

That’s how I would do it, except that you don’t need to do step 1, just make the scene file as you see fit. Peace, Matt. From: <hcp-users-boun...@humanconnectome.org> on behalf of Alexandra Walton Weston <walto...@ohsu.edu> Date: Saturday, July 18, 2015 at 8:47 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] automating figure creation with wb_command Hi all, I am processing a massive amount of data through HCP, and I'm working on some post-HCP summary figures for all of my subjects. I want to create an axial figure for every subject, with the pial and white matter surfaces overlaid for visual inspection. I have a plan to do this, but I want to check and see if I'm missing an obvious "easy way." My current idea is: Add the volume and surface images to a .spec file using wb_command Using a template .scene file created manually in wb_view, write a script to replace text in the xml for each new file path (my volume and L/R pial/white surfaces)  Use wb_command -show-scene to render the image in the background I don't think this will be challenging. I just want to make sure this isn't already a feature before I dive in. Best, Alex Weston _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users