Right, so doesn't the MEG pipeline already provide what the user requested because users can't generate it themselves because properly registering the MEG to the T1 structural requires use of a non-defaced T1, and that isn't provided externally due to privacy considerations?
-- Michael Harms, Ph.D. ----------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave.Tel: 314-747-6173 St. Louis, MO 63110Email: [email protected] On 12/14/15 1:41 PM, "Larson-Prior, Linda" <[email protected]> wrote: The MEG data do not contain the original T1 images used to create the head models. This file seems to belong to the MRI processing pipeline outputs as Donna suggested in her response *********** NOTE NEW ADDRESS L.J. Larson-Prior, PhD University of Arkansas for Medical Sciences Department of Psychiatry 4301 W. Markham #554 Little Rock AR 72205 email: [email protected] ph: 501-526-8100 mobile: 314-303-3498 On 12/14/15, 1:33 PM, "[email protected] on behalf of Harms, Michael" <[email protected] on behalf of [email protected]> wrote: > >Does the MEG specific processing not already contain what you need? > >-- >Michael Harms, Ph.D. > >----------------------------------------------------------- >Conte Center for the Neuroscience of Mental Disorders >Washington University School of Medicine >Department of Psychiatry, Box 8134 >660 South Euclid Ave.Tel: 314-747-6173 >St. Louis, MO 63110Email: [email protected] > > > > >On 12/14/15 11:40 AM, "Donna Dierker" <[email protected]> wrote: > >I think this is just an output of the Freesurfer processing. The stuff >here: > >> /MyDataPath/subjectID/T1w/subjectID > >Š is subjectID's freesurfer subject directory. > > >On Dec 14, 2015, at 11:38 AM, Gregory Butron <[email protected]> >wrote: > >> Greetings! >> I am a Biomedical Engineering Graduate student who has recently begun >>doing research with MEG and EEG data. >> >> I've been exploring the HCP open access data, and there is a particular >>file that is not mentioned or explained in any of the documentation that >>I've searched. >> >> For each subject's data directory there we have a folder of the form: >> /MyDataPath/subjectID/T1w/subjectID/mri/orig/ >> and the orig folder has a file (usually) named 001.mgz >> >> I believe that this should just be a structural scan of the subject in >>the compressed mgh format. However, since the file is not mentioned in >>any of the documentation I've looked through, I want to make sure that >>001.mgz isn't a standard model or anything like that. >> >> The reason I'm interested is because we can use this to create some >>volume conduction models related to processing the raw MEG data. >> >> If anyone knows for sure what this file is, or can point me toward the >>documentation I should be looking at, I would really appreciate it. >> >> - Greg B. >> _______________________________________________ >> HCP-Users mailing list >> [email protected] >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> > > >_______________________________________________ >HCP-Users mailing list >[email protected] >http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > >________________________________ >The materials in this message are private and may contain Protected >Healthcare Information or other information of a sensitive nature. If you >are not the intended recipient, be advised that any unauthorized use, >disclosure, copying or the taking of any action in reliance on the >contents of this information is strictly prohibited. If you have received >this email in error, please immediately notify the sender via telephone >or return mail. > >_______________________________________________ >HCP-Users mailing list >[email protected] >http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
