Jenn wrote: > output from the HCP pipelines that toy ate unfamiliar worth is available
Auto-complete run amok or typing while nursing? ;-) A-reum, if you have the structural extended package, you'll find the freesurfer subject directory here: > /MyDataPath/subjectID/T1w/subjectID Qdec should be happy with the stuff in there. I'm not sure which tools in the Freesurfer distribution can read CIFTI (e.g., *.dscalar.nii, *.dtseries.nii). I know some tools can read GIFTI (*.surf.gii) files. But whether all utilities do equally isn't clear to me. If you want to do statistical analyses with these files, I'd like to point you to PALM: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/PALM/UserGuide There is a bit of preprocessing to be done going into PALM, but it handles family structure and so much more. On Dec 28, 2015, at 11:44 AM, Jennifer Elam <[email protected]> wrote: > Yes, the preprocessed "Structural Extended" package for each subject has the > Freesurfer outputs that are intermediates in the HCP preprocessing pipelines. > More info about the files output from the HCP pipelines that toy ate > unfamiliar worth is available in the HCP Reference Manual for the 900 > Subjects release, on the HCP wiki, and in various posts to the HCP-users > list (searchable in the archive). Links to these are all at > humanconnectome.org > > Best, > Jenn > > On Dec 28, 2015 10:06 AM, "Donna Dierker" <[email protected]> wrote: > I don't know the name of the package, but it might be something like > "structural extended" -- one of them has the subject's freesurfer directory > in it. > > > On Dec 27, 2015, at 7:08 PM, A-reum Min <[email protected]> wrote: > >> hello >> my name is areum. >> i have some question to you. >> a few days ago i was down load HCP(human connectom project) s900 data. --> >> 3T imaging protocol completed True ver. >> but.. how can i use these HCP format. >> i use a freesurfer software. >> i have never seen before these format(fig.1.png) like a .gii , nii.. >> I want to see HCP data subjects's average cortical thickness using qdec or >> freeview. >> how can i to do? >> plz answer me >> _______________________________________________ >> HCP-Users mailing list >> [email protected] >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> >> <fig.1.png> > > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
