You can convert the CIFTI file to a GIFTI label file using wb_command -cifti-separate. As for going from GIFTI label to surf+label (probtrackx's interpretation of GIFTI), you'll need to use the label2surf. Hopefully either one of the oxford folks can explain how to use that here or on the FSL list.
Peace, Matt. From: <[email protected]<mailto:[email protected]>> on behalf of "Gopalakrishnan, Karthik" <[email protected]<mailto:[email protected]>> Date: Friday, October 21, 2016 at 2:12 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] Converting MMP-1.0 180 ROIs dlabel.nii file to surf.gii Hi all, How do we convert a dlabel.nii file containing 180 ROIs (Q1-Q6_RelatedParcellation210.L.CorticalAreas_dil_Colors.32k_fs_LR.dlabel.nii) to a surf.gii file? We want to do that such that the output ROIs can be used in probtracx. Thanks! Regards, Karthik _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
