Can you please clarify what the fields "Show Data Inside Thresholds" and "Show Data Outside Thresholds" represent? I'm confused by the wording...
-Tim Timothy Hendrickson Department of Psychiatry University of Minnesota Office: 612-624-6441 Mobile: 507-259-3434 (texts okay) On Tue, Dec 6, 2016 at 8:21 AM, Timothy Hendrickson <[email protected]> wrote: > Yes thank you! > > On Dec 6, 2016 8:13 AM, "Dierker, Donna" <[email protected]> wrote: > >> TimH - you mean this one? >> >> On Jul 7, 2016, at 10:26 AM, Dierker, Donna <[email protected]> wrote: >> >> You need to adjust your overlay settings; see attached capture. Make >> sure Threshold Type is set to On. >> >> >> >> >> On Dec 5, 2016, at 11:16 AM, Timothy Hendrickson <[email protected]> >> wrote: >> >> Hi Donna, >> >> Could you please re-attach the screen capture that you took for Vasudev? >> I cannot find it... >> I also am looking into how to observe significance levels with a >> threshold of p<0.05. >> >> Respectfully, >> >> -Tim >> >> You need to adjust your overlay settings; see attached capture. Make >> sure >> Threshold Type is set to On. >> >> ________________________________ >> From: >> [email protected] >> >> < >> [email protected] >> > on behalf of Dev vasu >> < >> [email protected] >> > >> Sent: Thursday, July 7, 2016 10:03:28 AM >> To: Dierker, Donna >> Cc: < >> [email protected] >> > >> Subject: Re: [HCP-Users] thresholding the data to p-value >> >> Dear madam, >> >> I don't want to write to an ROI volume, i just want to observe activation >> levels with a threshold of p<0.05. >> >> >> Thanks >> Vasudev >> >> On 7 July 2016 at 16:31, Dierker, Donna >> < >> [email protected]<mailto:[email protected] >> >> wrote: >> >> Hi Vasudev, >> >> >> I'm pretty sure wb_view can display voxels within a range of values >> (inside >> upper and lower limit), but I think you mean threshold and write a ROI >> volume. >> For that, try: >> >> >> wb_command -metric-math "(x<${Pthresh})" ${PthreshFile} -var x >> ${PstatFile} >> >> >> Donna >> >> ________________________________ >> From: >> >> [email protected]<mailto:hcp-users-boun. >> [email protected] >> > >> >> < >> [email protected]<mailto:hcp-users-boun. >> [email protected] >> >> >> on behalf of Dev vasu >> < >> [email protected]<mailto:vasudevamurthy. >> [email protected] >> >> >> Sent: Wednesday, July 6, 2016 12:04:50 PM >> To: Harms, Michael; >> < >> [email protected]<mailto:[email protected] >> >> >> Subject: [HCP-Users] thresholding the data to p-value >> >> >> >> Dear sir, >> >> I would like to threshold my results to a p-value of p<0.05 and i >> couldn't do >> it from workbench GUI, I can only threshold the data to percentage >> changes. >> >> Please kindly let me know how i can possibly threshold the results to >> real >> p-stats. >> >> >> >> Thanks >> Vasudev >> >> >> >> >> Timothy Hendrickson >> Department of Psychiatry >> University of Minnesota >> Office: 612-624-6441 >> Mobile: 507-259-3434 (texts okay) >> _______________________________________________ >> HCP-Users mailing list >> [email protected] >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> >> >> >> ------------------------------ >> >> The materials in this message are private and may contain Protected >> Healthcare Information or other information of a sensitive nature. If you >> are not the intended recipient, be advised that any unauthorized use, >> disclosure, copying or the taking of any action in reliance on the contents >> of this information is strictly prohibited. If you have received this email >> in error, please immediately notify the sender via telephone or return mail. >> > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
