If what you want to do is read the CIFTI into matlab, you can use the ciftiopen tool for this (2B):
https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ Peace, Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Lauren N <[email protected]<mailto:[email protected]>> Date: Tuesday, February 7, 2017 at 3:30 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] Reading gifti into matlab Hi all, I'm working with HCP data. Starting with some of the cifti dscalar.nii files of individual subject myelin and task-based contrasts, I pulled out specific columns from the task-based contrasts using -cifti-merge. Then, I combined these individual one-column dscalar files into one cifti file with 500 columns again using cifti-merge. Finally, I converted this to a metric gifti using cifti-separate. The gifti looks great in wb_view. However, I'm getting an error reading it into matlab with Guillaume Flandin's gifti library: Error using read_gifti_file_standalone (line 20) [GIFTI] Loading of XML file AllWM14CLeft.func.gii failed. Error in gifti (line 71) this = read_gifti_file_standalone(varargin{1},giftistruct); Any help would be greatly appreciated! I'm using the 1.6 version of the gifti library so I think it's up to date. Thanks, Lauren _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
