Hi Matt, Thanks very much for your reply. Unfortunately, I'm now getting the same error message trying to read in the cifti files (after downloading the cifti scripts provided at the link you sent). Do you have any idea why this might be?
Thanks, Lauren On Tue, Feb 7, 2017 at 4:50 PM, Glasser, Matthew <[email protected]> wrote: > If what you want to do is read the CIFTI into matlab, you can use the > ciftiopen tool for this (2B): > > https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ > > Peace, > > Matt. > > From: <[email protected]> on behalf of Lauren N < > [email protected]> > Date: Tuesday, February 7, 2017 at 3:30 PM > To: "[email protected]" <[email protected]> > Subject: [HCP-Users] Reading gifti into matlab > > Hi all, > > I'm working with HCP data. Starting with some of the cifti dscalar.nii > files of individual subject myelin and task-based contrasts, I pulled out > specific columns from the task-based contrasts using -cifti-merge. Then, I > combined these individual one-column dscalar files into one cifti file with > 500 columns again using cifti-merge. Finally, I converted this to a metric > gifti using cifti-separate. The gifti looks great in wb_view. However, I'm > getting an error reading it into matlab with Guillaume Flandin's gifti > library: > > Error using read_gifti_file_standalone (line 20) > [GIFTI] Loading of XML file > AllWM14CLeft.func.gii failed. > Error in gifti (line 71) > this = read_gifti_file_standalone(varargin{1},giftistruct); > > Any help would be greatly appreciated! I'm using the 1.6 version of the > gifti library so I think it's up to date. > Thanks, > Lauren > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
