You can use the latest FSL.  FreeSurfer needs to be kept at version 5.3 at  
this time.

Peace,

Matt.

From: 
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
 on behalf of Lisa Kramarenko 
<lisa.kramare...@gmail.com<mailto:lisa.kramare...@gmail.com>>
Date: Monday, April 24, 2017 at 4:16 AM
To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" 
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] Using fsl 5.0.9 and freesurfer v. 6.0

Hello,

would it cause problems to run Pre-FS, FS, Post-FS, Volume and Surface 
Functional and ICA-FIX pipelines with FSL 5.0.9 and the newest FreeSurfer 
version? Is there anything I should pay attention to?

Thanks a lot!

Lisa

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