Hi Tim,

Thank you for your reply. I was just trying to see if the pairwise geodesic 
distances would be interesting, but the current workbench command would 
generate thousands of files for doing this.


I also have a question about the discussions in the following thread:

https://www.mail-archive.com/[email protected]/msg05759.html

If I have a scene file of a dtseries.nii and would like to save the different 
maps of this dtseries using workbench command line, will I need to use the 
commands of a "development" version of workbench? I didn't find it on the HCP 
website. Thank you.


Aaron

________________________________
From: Timothy Coalson <[email protected]>
Sent: Wednesday, February 14, 2018 4:53:54 PM
To: Aaron C
Cc: [email protected]
Subject: Re: [HCP-Users] A question about workbench command

Not currently, no, though it could be added.  It is undefined between left and 
right hemispheres, so the obvious format would be a metric file, rather than 
cifti grayordinates.  Our uses of geodesic distance are generally limited to a 
short distance, we haven't really found it useful to know the geodesic distance 
between vertices that are separated by multiple sulci.

What are you planning to do with the distances?

Tim


On Tue, Feb 13, 2018 at 11:10 PM, Aaron C 
<[email protected]<mailto:[email protected]>> wrote:

Dear HCP experts,


Is there a one-line workbench command that could extract the matrix of geodesic 
distances between every pair of cortical grayordinates for a given brain 
surface? Thank you.

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