The first issue is currently resolved in the development version of Workbench, but a related issue is not. We will try to get that fixed too before the next release.
Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Matt Glasser <[email protected]<mailto:[email protected]>> Date: Tuesday, May 1, 2018 at 11:20 AM To: Emma Robinson <[email protected]<mailto:[email protected]>> Cc: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: Re: [HCP-Users] Problems viewing volumes using workbench in Linux Can you send me the file? Matt. From: Emma Robinson <[email protected]<mailto:[email protected]>> Date: Tuesday, May 1, 2018 at 11:06 AM To: Matt Glasser <[email protected]<mailto:[email protected]>> Cc: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: Re: [HCP-Users] Problems viewing volumes using workbench in Linux Hi Matt Both are running version is 1.2.3, which seems to be the most up-to-date? Thanks Emma On 1 May 2018 at 14:29, Glasser, Matthew <[email protected]<mailto:[email protected]>> wrote: Hi Emma, Are these the same workbench version? I think we fixed this issue at some point along the way. Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Emma Robinson <[email protected]<mailto:[email protected]>> Date: Tuesday, May 1, 2018 at 7:00 AM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] Problems viewing volumes using workbench in Linux Hi I'm seeing strange behaviour with workbench in linux. I am looking at neonatal data, processed through the dHCP pipeline but not acquired using dHCP acquisition protocols. When I try and look at the surfaces overlaid on the volume it works fine on mac but not in linux (see snapshots - volume_overlay_mac.png and volume_overlay_linux.png). However, in mac, when I view them on top of the tissue segmentations, then I see a shift (see volume_overlay_labels.png) It may be worth mentioning that, an issue that I know has come up before with other users is that they had problem viewing volumes in workbench that have off diagonals in the s/q-form. This I believe is also the case for this data (see snapshot from fslhd on data)? I don't really understand why this causing the data to look differently on the mac vs the linux? And why it is not viewing properly in workbench? It works fine in fslview. Thanks Emma _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
