I haven’t tried this before. Matt.
From: Danny Kim <[email protected]<mailto:[email protected]>> Date: Tuesday, May 1, 2018 at 3:32 PM To: Matt Glasser <[email protected]<mailto:[email protected]>>, "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: Re: [HCP-Users] MP2RAGE Hi Matt This is 3T data. Danny ________________________________ From: Glasser, Matthew <[email protected]<mailto:[email protected]>> Sent: Tuesday, May 1, 2018 1:25 PM To: Danny Kim; [email protected]<mailto:[email protected]> Subject: Re: [HCP-Users] MP2RAGE Is this 3T n or 7T data? Matt. From: <[email protected]<mailto:[email protected]>> on behalf of Danny Kim <[email protected]<mailto:[email protected]>> Date: Tuesday, May 1, 2018 at 3:08 PM To: "[email protected]<mailto:[email protected]>" <[email protected]<mailto:[email protected]>> Subject: [HCP-Users] MP2RAGE Hi experts, I was wondering if anyone has experience with getting MP2RAGE data through the structural HCP pipeline? I'm specifically looking for some help in streamlining brain extraction, negating non-intensity uniform correction, and correctly obtaining myelin maps on surfaces. Currently, brain-extraction is being done using one of the IR images of MP2RAGE to obtain a mask, but I find that there are many places where the algorithm applies some sort of intensity bias correction to a bias-free MP2RAGE image and negating the effects have been a problem. Also, the final myelin map has holes, even though the MP2RAGE image had been scaled to be all positive Any advice would be greatly appreciated! Best, Danny Kim BC Children's Hospital MRI Research Facility Vancouver, Canada _______________________________________________ HCP-Users mailing list [email protected]<mailto:[email protected]> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
