That process does not replicate how the timeseries data were gotten on the surface to begin with. What is it that you are trying to accomplish with this?
Peace, Matt. From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Seyedehrezvan Farahibozorg <rezvan.farahiboz...@ndcn.ox.ac.uk<mailto:rezvan.farahiboz...@ndcn.ox.ac.uk>> Date: Friday, June 1, 2018 at 1:05 PM To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] Mapping NIFTI to CIFTI Hi all, I have results of a subject-specific connectivity analysis on a) volumetric (.nii.gz) and b) CIFTI grayordinates (.dtseries.nii) data for a subset of 3T rfMRI HCP1200 subjects. In order to check the spatial correspondence, I am trying to map the former onto the space of the latter. To do so, I used the following steps using wb command line: 1- Mapped the volumetric data to subject-specific surface using -volume-to-surface-mapping: wb_command -volume-to-surface-mapping $input_nii $subject_gifti_left $output_gifti_left -trilinear wb_command -volume-to-surface-mapping $input_nii $subject_gifti_right $output_gifti_right -trilinear 2- Combined these mapped cortical responses and subcortical grey matter voxel responses in one CIFTI file using -cifti-create-dense-from-template: wb_command -cifti-create-dense-from-template $template_cifti $output_cifti -series 1 0 -volume-all $input_nii -metric CORTEX_LEFT $ output_gifti_left -metric CORTEX_RIGHT $output_gifti_right where $template_cifti is a group average of the aforementioned analysis on CIFTI data. I was wondering if this way of mapping is correct? I would very much appreciate your feedback... So many thanks, Rezvan _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
