Hi all, I have results of a subject-specific connectivity analysis on a) volumetric (.nii.gz) and b) CIFTI grayordinates (.dtseries.nii) data for a subset of 3T rfMRI HCP1200 subjects. In order to check the spatial correspondence, I am trying to map the former onto the space of the latter.
To do so, I used the following steps using wb command line: 1- Mapped the volumetric data to subject-specific surface using -volume-to-surface-mapping: wb_command -volume-to-surface-mapping $input_nii $subject_gifti_left $output_gifti_left -trilinear wb_command -volume-to-surface-mapping $input_nii $subject_gifti_right $output_gifti_right -trilinear 2- Combined these mapped cortical responses and subcortical grey matter voxel responses in one CIFTI file using -cifti-create-dense-from-template: wb_command -cifti-create-dense-from-template $template_cifti $output_cifti -series 1 0 -volume-all $input_nii -metric CORTEX_LEFT $ output_gifti_left -metric CORTEX_RIGHT $output_gifti_right where $template_cifti is a group average of the aforementioned analysis on CIFTI data. I was wondering if this way of mapping is correct? I would very much appreciate your feedback... So many thanks, Rezvan _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users