To Whom it may concern, I have created a pconn.nii file based on connectivity measures obtained based on a parcellation that I put together (dlabel.nii), which contains cortical and subcortical areas (Glasser + Gordon subcortical). This question might be trivial, but I would like to know if it is possible to visualize this matrix as a graph in workbench, i.e. if I can visualize lines “connecting” my parcels based on the values of the pconn file. If this is not possible, I would ask for any tips on how I could get the coordinates of my parcels in a space that at least resembles the brain, so that I can then connect them in another software. From the information I found in the mailing list, there seem to be ways to extract the greyordinate coordinates based on the dlabel.nii file and a corresponding .gii file. However, I was wondering if someone could outline the procedure for me or have any tips on achieving what I am trying to do in an optimal way. Thank you very much. Yours sincerely,
Leonardo Tozzi, MD, PhD Williams PanLab | Postdoctoral Fellow Stanford University | 401 Quarry Rd lto...@stanford.edu<mailto:lto...@stanford.edu> | (650) 5615738 _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
