1. The translations are in mm.  I don’t recall off the top of head whether the 
rotations are in degrees or rotations, but I believe that is documented in the 
release manual. (Or check the HCP Pipeline code).

2. RMS is based on a combination of both the translations and rotations.

3. Yes.

Cheers,
-MH

--
Michael Harms, Ph.D.
-----------------------------------------------------------
Associate Professor of Psychiatry
Washington University School of Medicine
Department of Psychiatry, Box 8134
660 South Euclid Ave.                        Tel: 314-747-6173
St. Louis, MO  63110                          Email: mha...@wustl.edu

From: <hcp-users-boun...@humanconnectome.org> on behalf of Gengyan Zhao 
<gzha...@wisc.edu>
Date: Tuesday, September 18, 2018 at 5:47 PM
To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org>
Subject: [HCP-Users] questions about the motion metrics 
(Movement_RelativeRMS_mean.txt)


Hello HCP masters,



I have several questions about the motion metrics generated by the minimal 
preprocessing pipeline.

For the file Movement_RelativeRMS_mean.txt:

1) what's the unit of the number in it?

2) How was the number calculated? Does the RMS include only the 3 translations 
or all the 3 translations and the 3 rotations?

3) Is the mean taken along the temporal dimension?



Thank you very much in advance.



Best,

Gengyan

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