Hi Matt,
MSMAll didn't work very well the first time we tried using 10 min (600 vol) of resting-state data only, but we re-ran it after concatenating the resting-state run with some task runs and that seems to have mostly fixed the issue. Dropbox links to screenshots below in case anyone is interested in the future. Thanks for your help! -Ely FS labeling issue in native space: https://www.dropbox.com/s/s72cs8esur5zoay/native_T1w_Axial_and_surface.png?dl=0 FS aligned myelin: https://www.dropbox.com/s/p525rx06yemp8qb/P038_MyelinMap_FS.png?dl=0 MSMSulc aligned myelin (has the biggest issue): https://www.dropbox.com/s/dmckoy03m6zexag/MNI_MSMSulc_myelin.png?dl=0 Multi-run MSMAll aligned myelin (useable): https://www.dropbox.com/s/7arva1mat53f2gd/P038_MyelinMap_MSMAll.png?dl=0 _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
